Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14j11
         (565 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   2.1  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   2.8  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   3.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   3.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   3.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   3.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.6  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 348 SWYDTSSIYGSWRSYGTTNDDGSTW 422
           SW  T++++  +  YGT N  G T+
Sbjct: 218 SWRITNNLFYPYPPYGTFNIKGDTF 242


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +1

Query: 118 VRKTHCTGRKHKDNVK 165
           +R THC      DN++
Sbjct: 409 IRNTHCVNNNQNDNIQ 424


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 213 CNNSGIQSRQNCSKSIWQQRHCNT 284
           CN S   S  +C   I  QRH +T
Sbjct: 374 CNISPRSSADSCQVGIMAQRHRDT 397


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 330 SCTRWSSWYDTSSIYGS 380
           S  +W+ W +T + YG+
Sbjct: 695 SWNKWNDWQETQNNYGA 711


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 330 SCTRWSSWYDTSSIYGS 380
           S  +W+ W +T + YG+
Sbjct: 695 SWNKWNDWQETQNNYGA 711


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 330 SCTRWSSWYDTSSIYGS 380
           S  +W+ W +T + YG+
Sbjct: 695 SWNKWNDWQETQNNYGA 711


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/35 (22%), Positives = 16/35 (45%)
 Frame = +1

Query: 187 EEQAQHLIDATTAAFKAGKIAQNPFGNKGTAIPPP 291
           E  +  L +++T +         P+  +GT + PP
Sbjct: 871 EVSSDKLQESSTDSRNPALALAEPYNQRGTVVSPP 905


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/35 (22%), Positives = 16/35 (45%)
 Frame = +1

Query: 187  EEQAQHLIDATTAAFKAGKIAQNPFGNKGTAIPPP 291
            E  +  L +++T +         P+  +GT + PP
Sbjct: 909  EVSSDKLQESSTDSRNPALALAEPYNQRGTVVSPP 943


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,328
Number of Sequences: 438
Number of extensions: 2503
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)