BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14i20
(209 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21936-1|AAA63797.1| 708|Homo sapiens peptide transporter protein. 27 8.3
U13173-1|AAB61693.1| 708|Homo sapiens intestinal H+/peptide cot... 27 8.3
BC096329-1|AAH96329.1| 708|Homo sapiens solute carrier family 1... 27 8.3
BC096328-1|AAH96328.1| 708|Homo sapiens solute carrier family 1... 27 8.3
BC096327-1|AAH96327.1| 708|Homo sapiens solute carrier family 1... 27 8.3
AY634368-1|AAT48121.1| 705|Homo sapiens macrophage oligopeptide... 27 8.3
AL391670-1|CAH70393.1| 708|Homo sapiens solute carrier family 1... 27 8.3
AL353574-2|CAI15619.1| 708|Homo sapiens solute carrier family 1... 27 8.3
AF043233-1|AAC15477.1| 708|Homo sapiens Caco-2 oligopeptide tra... 27 8.3
>U21936-1|AAA63797.1| 708|Homo sapiens peptide transporter protein.
Length = 708
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 96 KGNIXGHIANCIGSSIFNR 40
+GNI G +A CIG +I NR
Sbjct: 229 QGNIMGKVAKCIGFAIKNR 247
>U13173-1|AAB61693.1| 708|Homo sapiens intestinal H+/peptide
cotransporter protein.
Length = 708
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 96 KGNIXGHIANCIGSSIFNR 40
+GNI G +A CIG +I NR
Sbjct: 229 QGNIMGKVAKCIGFAIKNR 247
>BC096329-1|AAH96329.1| 708|Homo sapiens solute carrier family 15
(oligopeptide transporter), member 1 protein.
Length = 708
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 96 KGNIXGHIANCIGSSIFNR 40
+GNI G +A CIG +I NR
Sbjct: 229 QGNIMGKVAKCIGFAIKNR 247
>BC096328-1|AAH96328.1| 708|Homo sapiens solute carrier family 15
(oligopeptide transporter), member 1 protein.
Length = 708
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 96 KGNIXGHIANCIGSSIFNR 40
+GNI G +A CIG +I NR
Sbjct: 229 QGNIMGKVAKCIGFAIKNR 247
>BC096327-1|AAH96327.1| 708|Homo sapiens solute carrier family 15
(oligopeptide transporter), member 1 protein.
Length = 708
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 96 KGNIXGHIANCIGSSIFNR 40
+GNI G +A CIG +I NR
Sbjct: 229 QGNIMGKVAKCIGFAIKNR 247
>AY634368-1|AAT48121.1| 705|Homo sapiens macrophage oligopeptide
transporter PEPT1 protein.
Length = 705
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 96 KGNIXGHIANCIGSSIFNR 40
+GNI G +A CIG +I NR
Sbjct: 229 QGNIMGKVAKCIGFAIKNR 247
>AL391670-1|CAH70393.1| 708|Homo sapiens solute carrier family 15
(oligopeptide transporter), member 1 protein.
Length = 708
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 96 KGNIXGHIANCIGSSIFNR 40
+GNI G +A CIG +I NR
Sbjct: 229 QGNIMGKVAKCIGFAIKNR 247
>AL353574-2|CAI15619.1| 708|Homo sapiens solute carrier family 15
(oligopeptide transporter), member 1 protein.
Length = 708
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 96 KGNIXGHIANCIGSSIFNR 40
+GNI G +A CIG +I NR
Sbjct: 229 QGNIMGKVAKCIGFAIKNR 247
>AF043233-1|AAC15477.1| 708|Homo sapiens Caco-2 oligopeptide
transporter protein.
Length = 708
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 96 KGNIXGHIANCIGSSIFNR 40
+GNI G +A CIG +I NR
Sbjct: 229 QGNIMGKVAKCIGFAIKNR 247
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,263,603
Number of Sequences: 237096
Number of extensions: 425012
Number of successful extensions: 614
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 76,859,062
effective HSP length: 48
effective length of database: 65,478,454
effective search space used: 1375047534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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