Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14i20
         (209 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              19   4.9  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    19   6.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    19   6.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    19   6.4  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    19   8.5  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 146 NFIMHVARKSQNTILNNN 199
           NF  HV+R+     LN N
Sbjct: 78  NFNEHVSREIAKIFLNEN 95


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.0 bits (37), Expect = 6.4
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -3

Query: 195 LFKIVFCDLRATCIIKFINTSVFN 124
           +F I  C L  TC +     S+ N
Sbjct: 103 IFGIHLCKLWLTCDVLCCTASILN 126


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.0 bits (37), Expect = 6.4
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -3

Query: 195 LFKIVFCDLRATCIIKFINTSVFN 124
           +F I  C L  TC +     S+ N
Sbjct: 103 IFGIHLCKLWLTCDVLCCTASILN 126


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 19.0 bits (37), Expect = 6.4
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -3

Query: 195 LFKIVFCDLRATCIIKFINTSVFN 124
           +F I  C L  TC +     S+ N
Sbjct: 103 IFGIHLCKLWLTCDVLCCTASILN 126


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 18.6 bits (36), Expect = 8.5
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -2

Query: 67  LHRLVYF 47
           +HRLVYF
Sbjct: 339 IHRLVYF 345


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,284
Number of Sequences: 438
Number of extensions: 1073
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  3039192
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)