Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14i18
         (384 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117364-1|AAI17365.1|  559|Homo sapiens phosphatase and actin r...    29   5.1  
BC117362-1|AAI17363.1|  559|Homo sapiens phosphatase and actin r...    29   5.1  
BC108303-1|AAI08304.1|  559|Homo sapiens phosphatase and actin r...    29   5.1  
AL357503-5|CAI23229.1|  559|Homo sapiens phosphatase and actin r...    29   5.1  
AL357503-3|CAI23228.2|  518|Homo sapiens phosphatase and actin r...    29   5.1  
AL357503-2|CAM28339.1|  448|Homo sapiens phosphatase and actin r...    29   5.1  
AL357503-1|CAI23227.1|  556|Homo sapiens phosphatase and actin r...    29   5.1  
AL121908-3|CAI22518.1|  559|Homo sapiens phosphatase and actin r...    29   5.1  
AL121908-1|CAI22517.1|  556|Homo sapiens phosphatase and actin r...    29   5.1  
AJ617581-1|CAF04087.1|  518|Homo sapiens scapinin 1C protein.          29   5.1  
AJ311122-1|CAC67489.2|  518|Homo sapiens scapinin 1B protein.          29   5.1  
AB098522-1|BAC82349.1|  448|Homo sapiens scapinin S protein.           29   5.1  
AB098521-1|BAC82348.1|  518|Homo sapiens scapinin protein.             29   5.1  
BX538189-1|CAD98059.1|  691|Homo sapiens hypothetical protein pr...    29   6.8  
BC130610-1|AAI30611.1| 1672|Homo sapiens KIDINS220 protein protein.    29   6.8  
AB033076-1|BAA86564.2| 1777|Homo sapiens KIAA1250 protein protein.     29   6.8  
DQ648884-1|ABG49480.1|  155|Homo sapiens p53-Ex4 isoform protein.      28   8.9  
BC111558-1|AAI11559.1|  302|Homo sapiens hypothetical protein LO...    28   8.9  
AY166864-1|AAO39152.1|  348|Homo sapiens truncated alpha-1,4-gal...    28   8.9  

>BC117364-1|AAI17365.1|  559|Homo sapiens phosphatase and actin
           regulator 3 protein.
          Length = 559

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 109 GRVFVPWNIHGKRNQKARSGKSLDLLARESRKGRRE 2
           GR+F PW    K+N+K +   S        R+GR E
Sbjct: 72  GRIFKPWKWRKKKNEKLKQTTSALEKKMAGRQGREE 107


>BC117362-1|AAI17363.1|  559|Homo sapiens phosphatase and actin
           regulator 3 protein.
          Length = 559

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 109 GRVFVPWNIHGKRNQKARSGKSLDLLARESRKGRRE 2
           GR+F PW    K+N+K +   S        R+GR E
Sbjct: 72  GRIFKPWKWRKKKNEKLKQTTSALEKKMAGRQGREE 107


>BC108303-1|AAI08304.1|  559|Homo sapiens phosphatase and actin
           regulator 3 protein.
          Length = 559

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 109 GRVFVPWNIHGKRNQKARSGKSLDLLARESRKGRRE 2
           GR+F PW    K+N+K +   S        R+GR E
Sbjct: 72  GRIFKPWKWRKKKNEKLKQTTSALEKKMAGRQGREE 107


>AL357503-5|CAI23229.1|  559|Homo sapiens phosphatase and actin
           regulator 3 protein.
          Length = 559

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 109 GRVFVPWNIHGKRNQKARSGKSLDLLARESRKGRRE 2
           GR+F PW    K+N+K +   S        R+GR E
Sbjct: 72  GRIFKPWKWRKKKNEKLKQTTSALEKKMAGRQGREE 107


>AL357503-3|CAI23228.2|  518|Homo sapiens phosphatase and actin
           regulator 3 protein.
          Length = 518

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 109 GRVFVPWNIHGKRNQKARSGKSLDLLARESRKGRRE 2
           GR+F PW    K+N+K +   S        R+GR E
Sbjct: 31  GRIFKPWKWRKKKNEKLKQTTSALEKKMAGRQGREE 66


>AL357503-2|CAM28339.1|  448|Homo sapiens phosphatase and actin
           regulator 3 protein.
          Length = 448

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 109 GRVFVPWNIHGKRNQKARSGKSLDLLARESRKGRRE 2
           GR+F PW    K+N+K +   S        R+GR E
Sbjct: 31  GRIFKPWKWRKKKNEKLKQTTSALEKKMAGRQGREE 66


>AL357503-1|CAI23227.1|  556|Homo sapiens phosphatase and actin
           regulator 3 protein.
          Length = 556

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 109 GRVFVPWNIHGKRNQKARSGKSLDLLARESRKGRRE 2
           GR+F PW    K+N+K +   S        R+GR E
Sbjct: 69  GRIFKPWKWRKKKNEKLKQTTSALEKKMAGRQGREE 104


>AL121908-3|CAI22518.1|  559|Homo sapiens phosphatase and actin
           regulator 3 protein.
          Length = 559

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 109 GRVFVPWNIHGKRNQKARSGKSLDLLARESRKGRRE 2
           GR+F PW    K+N+K +   S        R+GR E
Sbjct: 72  GRIFKPWKWRKKKNEKLKQTTSALEKKMAGRQGREE 107


>AL121908-1|CAI22517.1|  556|Homo sapiens phosphatase and actin
           regulator 3 protein.
          Length = 556

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 109 GRVFVPWNIHGKRNQKARSGKSLDLLARESRKGRRE 2
           GR+F PW    K+N+K +   S        R+GR E
Sbjct: 69  GRIFKPWKWRKKKNEKLKQTTSALEKKMAGRQGREE 104


>AJ617581-1|CAF04087.1|  518|Homo sapiens scapinin 1C protein.
          Length = 518

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 109 GRVFVPWNIHGKRNQKARSGKSLDLLARESRKGRRE 2
           GR+F PW    K+N+K +   S        R+GR E
Sbjct: 31  GRIFKPWKWRKKKNEKLKQTTSALEKKMAGRQGREE 66


>AJ311122-1|CAC67489.2|  518|Homo sapiens scapinin 1B protein.
          Length = 518

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 109 GRVFVPWNIHGKRNQKARSGKSLDLLARESRKGRRE 2
           GR+F PW    K+N+K +   S        R+GR E
Sbjct: 31  GRIFKPWKWRKKKNEKLKQTTSALEKKMAGRQGREE 66


>AB098522-1|BAC82349.1|  448|Homo sapiens scapinin S protein.
          Length = 448

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 109 GRVFVPWNIHGKRNQKARSGKSLDLLARESRKGRRE 2
           GR+F PW    K+N+K +   S        R+GR E
Sbjct: 31  GRIFKPWKWRKKKNEKLKQTTSALEKKMAGRQGREE 66


>AB098521-1|BAC82348.1|  518|Homo sapiens scapinin protein.
          Length = 518

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 109 GRVFVPWNIHGKRNQKARSGKSLDLLARESRKGRRE 2
           GR+F PW    K+N+K +   S        R+GR E
Sbjct: 31  GRIFKPWKWRKKKNEKLKQTTSALEKKMAGRQGREE 66


>BX538189-1|CAD98059.1|  691|Homo sapiens hypothetical protein
           protein.
          Length = 691

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +3

Query: 120 RSARTSLSDN--AFPRFLLVITPPLCSSG*DRPPTFISSHSFRPP 248
           R+AR  +S    A+P   L   PP   SG  +PP+  SS SF  P
Sbjct: 43  RAAREQISIGGLAYPPLPLHEGPPRAPSGYSQPPSVCSSTSFNGP 87


>BC130610-1|AAI30611.1| 1672|Homo sapiens KIDINS220 protein protein.
          Length = 1672

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +3

Query: 120  RSARTSLSDN--AFPRFLLVITPPLCSSG*DRPPTFISSHSFRPP 248
            R+AR  +S    A+P   L   PP   SG  +PP+  SS SF  P
Sbjct: 1024 RAAREQISIGGLAYPPLPLHEGPPRAPSGYSQPPSVCSSTSFNGP 1068


>AB033076-1|BAA86564.2| 1777|Homo sapiens KIAA1250 protein protein.
          Length = 1777

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +3

Query: 120  RSARTSLSDN--AFPRFLLVITPPLCSSG*DRPPTFISSHSFRPP 248
            R+AR  +S    A+P   L   PP   SG  +PP+  SS SF  P
Sbjct: 1072 RAAREQISIGGLAYPPLPLHEGPPRAPSGYSQPPSVCSSTSFNGP 1116


>DQ648884-1|ABG49480.1|  155|Homo sapiens p53-Ex4 isoform protein.
          Length = 155

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 19 WTLLPADQVIYQSALFDFFCR 81
          W LLP + V+Y  AL + FC+
Sbjct: 23 WRLLPENNVLYSPALNEMFCQ 43


>BC111558-1|AAI11559.1|  302|Homo sapiens hypothetical protein
           LOC284837 protein.
          Length = 302

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +1

Query: 40  QVIYQSALFDFFCRECSKEQKLALKIGEVPELLCQTMLSLGFSWLSRP 183
           QV +Q A      R+ +  +K  +   + P  LC   +SL  SW SRP
Sbjct: 244 QVSFQGAADGCSLRDANTNRKGPMHGSDFPHRLCLHSMSLWGSWGSRP 291


>AY166864-1|AAO39152.1|  348|Homo sapiens truncated
           alpha-1,4-galactosyltransferase protein.
          Length = 348

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 19/68 (27%), Positives = 26/68 (38%)
 Frame = +3

Query: 96  TKTRPQNRRSARTSLSDNAFPRFLLVITPPLCSSG*DRPPTFISSHSFRPPLFRSFCRGC 275
           T+ R  +R S+R+ +   A+PR       P C      P    +  S      R  CRGC
Sbjct: 248 TRARSCSRGSSRSGVPSAAWPRAAPAAASPPCPLRPSTPSPGRTGRSTLRTSTRRSCRGC 307

Query: 276 FATGFLMT 299
                L T
Sbjct: 308 SVPPMLST 315


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,649,772
Number of Sequences: 237096
Number of extensions: 1268104
Number of successful extensions: 2925
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2925
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)