Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14i18
         (384 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3257|AAF56085.1|  223|Drosophila melanogaster CG13837-P...    29   1.6  
AF459534-1|AAN61350.1|  107|Drosophila melanogaster BcDNA:GH1071...    27   8.4  
AF459524-1|AAN61340.1|  107|Drosophila melanogaster BcDNA:GH1071...    27   8.4  

>AE014297-3257|AAF56085.1|  223|Drosophila melanogaster CG13837-PA
           protein.
          Length = 223

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 304 HGRNCAFSRFCRFGHSLLGRCFL 372
           H RNCA+  +C  G  L+ RC L
Sbjct: 164 HPRNCAYFYYCSSGSKLVHRCHL 186


>AF459534-1|AAN61350.1|  107|Drosophila melanogaster BcDNA:GH10711
           protein.
          Length = 107

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -3

Query: 265 QKDRKRGGRNECELINVGGRSYPEEHKGGV 176
           Q+ +++  + + E+IN  G+S+   HKGG+
Sbjct: 38  QQQQQQSSQPKTEIINTDGQSHIFSHKGGL 67


>AF459524-1|AAN61340.1|  107|Drosophila melanogaster BcDNA:GH10711
           protein.
          Length = 107

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -3

Query: 265 QKDRKRGGRNECELINVGGRSYPEEHKGGV 176
           Q+ +++  + + E+IN  G+S+   HKGG+
Sbjct: 38  QQQQQQSSQPKTEIINTDGQSHIFSHKGGL 67


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,822,400
Number of Sequences: 53049
Number of extensions: 377048
Number of successful extensions: 1050
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)