Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14i16
         (505 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...   188   3e-48
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    30   1.1  
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z69386-3|CAA93432.2|  322|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z66524-6|CAA91418.2|  408|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p...    27   7.7  
AF022969-1|AAB69894.3|  391|Caenorhabditis elegans Hypothetical ...    27   7.7  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score =  188 bits (457), Expect = 3e-48
 Identities = 91/148 (61%), Positives = 104/148 (70%)
 Frame = +3

Query: 60  MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 239
           MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1   MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60

Query: 240 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 419
             Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG                  
Sbjct: 61  VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120

Query: 420 XXXXXXXXEYNVEPVDNGPGAFXCYLDV 503
                   +YNVE  +     F   LD+
Sbjct: 121 GHEELTGEDYNVEE-EGDRAPFKAVLDI 147


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -2

Query: 294  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 181
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -2

Query: 294  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 181
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
           protein K10G4.5 protein.
          Length = 1251

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +3

Query: 189 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 308
           YN P+YR +++L  K   C+     + GD++   +CA +  EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588


>Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 336 SDQPSHHNVATHVNKQRTQYGHLQSESRP 250
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


>Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical
           protein T23B5.3b protein.
          Length = 540

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 336 SDQPSHHNVATHVNKQRTQYGHLQSESRP 250
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


>Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 336 SDQPSHHNVATHVNKQRTQYGHLQSESRP 250
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


>Z69386-3|CAA93432.2|  322|Caenorhabditis elegans Hypothetical
           protein ZK596.3 protein.
          Length = 322

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = -3

Query: 236 IFVGETHNQTIFRCVI--FVLVLNNEAFTSIIISFPFTTPLEFYLVPLEVLFVLHNFNES 63
           + +  TH   +F+C++  FV + N+      II FP  T    + + L V+  L    +S
Sbjct: 141 VLLSMTH--ALFQCMLINFVSMANHSPTLERIIGFPLVTVETVHNLCLYVISALQYEQDS 198

Query: 62  HIL 54
           H++
Sbjct: 199 HLM 201


>Z66524-6|CAA91418.2|  408|Caenorhabditis elegans Hypothetical
           protein T13H5.2 protein.
          Length = 408

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 14/69 (20%), Positives = 31/69 (44%)
 Frame = -2

Query: 336 SDQPSHHNVATHVNKQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYICSCPEQRGVY 157
           +D P+      +V+ + T +  +  E   PG     W   +++DI    + +   +  V 
Sbjct: 291 NDLPAEKLTKLNVSARSTTFVPITLEGNVPGRKLYWWWRLENNDINFSILRAAEGEEKVA 350

Query: 156 EHNNQFSLH 130
           EH++ + +H
Sbjct: 351 EHDDDYMVH 359


>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
 Frame = +1

Query: 46  LRFKIWDSLKL*RTNN---TSRGTK*NSRGVVKGKLIIMLVNASLFRTRTNITHLNIV*L 216
           L +++ D +   R +N   T  G   NS+GVVK KL   L   S+    T ++ L ++  
Sbjct: 68  LHYQLLDGIATFRLDNDDTTIGGVPRNSQGVVKIKLSCGLNRLSVENKVTEVSSLELIHN 127

Query: 217 CV 222
           C+
Sbjct: 128 CI 129


>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
 Frame = +1

Query: 46  LRFKIWDSLKL*RTNN---TSRGTK*NSRGVVKGKLIIMLVNASLFRTRTNITHLNIV*L 216
           L +++ D +   R +N   T  G   NS+GVVK KL   L   S+    T ++ L ++  
Sbjct: 68  LHYQLLDGIATFRLDNDDTTIGGVPRNSQGVVKIKLSCGLNRLSVENKVTEVSSLELIHN 127

Query: 217 CV 222
           C+
Sbjct: 128 CI 129


>AF022969-1|AAB69894.3|  391|Caenorhabditis elegans Hypothetical
           protein C29G2.5 protein.
          Length = 391

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 180 KNKYNTPKYRLIVRLSNKDVTCQVAYSRIEG 272
           K+K  TP YRL++ L + D+T  V  S I G
Sbjct: 187 KSKSRTPTYRLMLILGSLDLTGLVISSLIPG 217


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,640,496
Number of Sequences: 27780
Number of extensions: 233724
Number of successful extensions: 566
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)