Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14i14
(559 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X84740-1|CAA59230.1| 922|Homo sapiens DNA ligase III protein. 71 3e-12
U40671-1|AAA85022.1| 862|Homo sapiens DNA ligase III protein. 71 3e-12
BC068005-1|AAH68005.1| 1009|Homo sapiens ligase III, DNA, ATP-de... 71 3e-12
BC009026-1|AAH09026.1| 299|Homo sapiens LIG3 protein protein. 71 3e-12
AF491645-1|AAL91592.1| 862|Homo sapiens ligase III, DNA, ATP-de... 71 3e-12
M18112-1|AAA60137.1| 1014|Homo sapiens PPOL protein. 55 1e-07
X56140-1|CAA39606.1| 95|Homo sapiens NAD(+) ADP-ribosyltransfe... 55 2e-07
M32721-1|AAA60155.1| 1014|Homo sapiens PPOL protein. 55 2e-07
M29786-1|AAA51663.1| 1014|Homo sapiens PPOL protein. 55 2e-07
BC037545-1|AAH37545.1| 1014|Homo sapiens poly (ADP-ribose) polym... 55 2e-07
BC018620-1|AAH18620.1| 232|Homo sapiens Unknown (protein for IM... 55 2e-07
BC014206-1|AAH14206.1| 250|Homo sapiens PARP1 protein protein. 55 2e-07
AL359742-3|CAI12102.1| 1014|Homo sapiens poly (ADP-ribose) polym... 55 2e-07
AL359704-6|CAH70217.1| 108|Homo sapiens poly (ADP-ribose) polym... 55 2e-07
AL359704-5|CAH70216.1| 155|Homo sapiens poly (ADP-ribose) polym... 55 2e-07
AL359704-4|CAH70215.1| 1014|Homo sapiens poly (ADP-ribose) polym... 55 2e-07
AF524947-1|AAM75364.1| 1014|Homo sapiens ADP-ribosyltransferase ... 55 2e-07
J03473-1|AAB59447.1| 1014|Homo sapiens PPOL protein. 52 2e-06
X16674-1|CAA34663.1| 40|Homo sapiens NAD(+) ADP-ribosyltransfe... 36 0.096
M60436-1|AAA60000.1| 40|Homo sapiens poly(ADP-ribose) polymera... 36 0.096
>X84740-1|CAA59230.1| 922|Homo sapiens DNA ligase III protein.
Length = 922
Score = 70.9 bits (166), Expect = 3e-12
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 322 FYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQS-MKSWYHVHCFTDVLLKQRP 498
F VD AK G A CK CK G R+ K+VP+P+ ++ MK WYH+ C + L + R
Sbjct: 6 FCVDYAKRGTAGCKKCKEKIVKGVCRIGKVVPNPFSESGGDMKEWYHIKCMFEKLERARA 65
Query: 499 NTKRVESINDIGNWDNI 549
TK++E + ++ W+ +
Sbjct: 66 TTKKIEDLTELEGWEEL 82
>U40671-1|AAA85022.1| 862|Homo sapiens DNA ligase III protein.
Length = 862
Score = 70.9 bits (166), Expect = 3e-12
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 322 FYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQS-MKSWYHVHCFTDVLLKQRP 498
F VD AK G A CK CK G R+ K+VP+P+ ++ MK WYH+ C + L + R
Sbjct: 6 FCVDYAKRGTAGCKKCKEKIVKGVCRIGKVVPNPFSESGGDMKEWYHIKCMFEKLERARA 65
Query: 499 NTKRVESINDIGNWDNI 549
TK++E + ++ W+ +
Sbjct: 66 TTKKIEDLTELEGWEEL 82
>BC068005-1|AAH68005.1| 1009|Homo sapiens ligase III, DNA,
ATP-dependent protein.
Length = 1009
Score = 70.9 bits (166), Expect = 3e-12
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 322 FYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQS-MKSWYHVHCFTDVLLKQRP 498
F VD AK G A CK CK G R+ K+VP+P+ ++ MK WYH+ C + L + R
Sbjct: 93 FCVDYAKRGTAGCKKCKEKIVKGVCRIGKVVPNPFSESGGDMKEWYHIKCMFEKLERARA 152
Query: 499 NTKRVESINDIGNWDNI 549
TK++E + ++ W+ +
Sbjct: 153 TTKKIEDLTELEGWEEL 169
>BC009026-1|AAH09026.1| 299|Homo sapiens LIG3 protein protein.
Length = 299
Score = 70.9 bits (166), Expect = 3e-12
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 322 FYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQS-MKSWYHVHCFTDVLLKQRP 498
F VD AK G A CK CK G R+ K+VP+P+ ++ MK WYH+ C + L + R
Sbjct: 93 FCVDYAKRGTAGCKKCKEKIVKGVCRIGKVVPNPFSESGGDMKEWYHIKCMFEKLERARA 152
Query: 499 NTKRVESINDIGNWDNI 549
TK++E + ++ W+ +
Sbjct: 153 TTKKIEDLTELEGWEEL 169
>AF491645-1|AAL91592.1| 862|Homo sapiens ligase III, DNA,
ATP-dependent protein.
Length = 862
Score = 70.9 bits (166), Expect = 3e-12
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 322 FYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQS-MKSWYHVHCFTDVLLKQRP 498
F VD AK G A CK CK G R+ K+VP+P+ ++ MK WYH+ C + L + R
Sbjct: 6 FCVDYAKRGTAGCKKCKEKIVKGVCRIGKVVPNPFSESGGDMKEWYHIKCMFEKLERARA 65
Query: 499 NTKRVESINDIGNWDNI 549
TK++E + ++ W+ +
Sbjct: 66 TTKKIEDLTELEGWEEL 82
>M18112-1|AAA60137.1| 1014|Homo sapiens PPOL protein.
Length = 1014
Score = 55.2 bits (127), Expect = 1e-07
Identities = 30/83 (36%), Positives = 44/83 (53%)
Frame = +1
Query: 298 IAMSDSTPFYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQSMKSWYHVHCFTD 477
+A S + V+ AK GRA+CK C + P LRMA +V SP D + + WYH CF
Sbjct: 1 MAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGK-VPHWYHFSCFWK 59
Query: 478 VLLKQRPNTKRVESINDIGNWDN 546
V R +V+ +++ WD+
Sbjct: 60 VGHSIRHPDVQVDGFSEL-RWDD 81
>X56140-1|CAA39606.1| 95|Homo sapiens NAD(+)
ADP-ribosyltransferase protein.
Length = 95
Score = 54.8 bits (126), Expect = 2e-07
Identities = 30/83 (36%), Positives = 43/83 (51%)
Frame = +1
Query: 298 IAMSDSTPFYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQSMKSWYHVHCFTD 477
+A S + V+ AK GRA+CK C + P LRMA +V SP D + + WYH CF
Sbjct: 1 MAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGK-VPHWYHFSCFWK 59
Query: 478 VLLKQRPNTKRVESINDIGNWDN 546
V R V+ +++ WD+
Sbjct: 60 VGHSIRHPDVEVDGFSEL-RWDD 81
>M32721-1|AAA60155.1| 1014|Homo sapiens PPOL protein.
Length = 1014
Score = 54.8 bits (126), Expect = 2e-07
Identities = 30/83 (36%), Positives = 43/83 (51%)
Frame = +1
Query: 298 IAMSDSTPFYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQSMKSWYHVHCFTD 477
+A S + V+ AK GRA+CK C + P LRMA +V SP D + + WYH CF
Sbjct: 1 MAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGK-VPHWYHFSCFWK 59
Query: 478 VLLKQRPNTKRVESINDIGNWDN 546
V R V+ +++ WD+
Sbjct: 60 VGHSIRHPDVEVDGFSEL-RWDD 81
>M29786-1|AAA51663.1| 1014|Homo sapiens PPOL protein.
Length = 1014
Score = 54.8 bits (126), Expect = 2e-07
Identities = 30/83 (36%), Positives = 43/83 (51%)
Frame = +1
Query: 298 IAMSDSTPFYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQSMKSWYHVHCFTD 477
+A S + V+ AK GRA+CK C + P LRMA +V SP D + + WYH CF
Sbjct: 1 MAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGK-VPHWYHFSCFWK 59
Query: 478 VLLKQRPNTKRVESINDIGNWDN 546
V R V+ +++ WD+
Sbjct: 60 VGHSIRHPDVEVDGFSEL-RWDD 81
>BC037545-1|AAH37545.1| 1014|Homo sapiens poly (ADP-ribose)
polymerase family, member 1 protein.
Length = 1014
Score = 54.8 bits (126), Expect = 2e-07
Identities = 30/83 (36%), Positives = 43/83 (51%)
Frame = +1
Query: 298 IAMSDSTPFYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQSMKSWYHVHCFTD 477
+A S + V+ AK GRA+CK C + P LRMA +V SP D + + WYH CF
Sbjct: 1 MAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGK-VPHWYHFSCFWK 59
Query: 478 VLLKQRPNTKRVESINDIGNWDN 546
V R V+ +++ WD+
Sbjct: 60 VGHSIRHPDVEVDGFSEL-RWDD 81
>BC018620-1|AAH18620.1| 232|Homo sapiens Unknown (protein for
IMAGE:5015448) protein.
Length = 232
Score = 54.8 bits (126), Expect = 2e-07
Identities = 30/83 (36%), Positives = 43/83 (51%)
Frame = +1
Query: 298 IAMSDSTPFYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQSMKSWYHVHCFTD 477
+A S + V+ AK GRA+CK C + P LRMA +V SP D + + WYH CF
Sbjct: 1 MAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGK-VPHWYHFSCFWK 59
Query: 478 VLLKQRPNTKRVESINDIGNWDN 546
V R V+ +++ WD+
Sbjct: 60 VGHSIRHPDVEVDGFSEL-RWDD 81
>BC014206-1|AAH14206.1| 250|Homo sapiens PARP1 protein protein.
Length = 250
Score = 54.8 bits (126), Expect = 2e-07
Identities = 30/83 (36%), Positives = 43/83 (51%)
Frame = +1
Query: 298 IAMSDSTPFYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQSMKSWYHVHCFTD 477
+A S + V+ AK GRA+CK C + P LRMA +V SP D + + WYH CF
Sbjct: 1 MAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGK-VPHWYHFSCFWK 59
Query: 478 VLLKQRPNTKRVESINDIGNWDN 546
V R V+ +++ WD+
Sbjct: 60 VGHSIRHPDVEVDGFSEL-RWDD 81
>AL359742-3|CAI12102.1| 1014|Homo sapiens poly (ADP-ribose)
polymerase family, member 1 protein.
Length = 1014
Score = 54.8 bits (126), Expect = 2e-07
Identities = 30/83 (36%), Positives = 43/83 (51%)
Frame = +1
Query: 298 IAMSDSTPFYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQSMKSWYHVHCFTD 477
+A S + V+ AK GRA+CK C + P LRMA +V SP D + + WYH CF
Sbjct: 1 MAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGK-VPHWYHFSCFWK 59
Query: 478 VLLKQRPNTKRVESINDIGNWDN 546
V R V+ +++ WD+
Sbjct: 60 VGHSIRHPDVEVDGFSEL-RWDD 81
>AL359704-6|CAH70217.1| 108|Homo sapiens poly (ADP-ribose)
polymerase family, member 1 protein.
Length = 108
Score = 54.8 bits (126), Expect = 2e-07
Identities = 30/83 (36%), Positives = 43/83 (51%)
Frame = +1
Query: 298 IAMSDSTPFYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQSMKSWYHVHCFTD 477
+A S + V+ AK GRA+CK C + P LRMA +V SP D + + WYH CF
Sbjct: 1 MAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGK-VPHWYHFSCFWK 59
Query: 478 VLLKQRPNTKRVESINDIGNWDN 546
V R V+ +++ WD+
Sbjct: 60 VGHSIRHPDVEVDGFSEL-RWDD 81
>AL359704-5|CAH70216.1| 155|Homo sapiens poly (ADP-ribose)
polymerase family, member 1 protein.
Length = 155
Score = 54.8 bits (126), Expect = 2e-07
Identities = 30/83 (36%), Positives = 43/83 (51%)
Frame = +1
Query: 298 IAMSDSTPFYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQSMKSWYHVHCFTD 477
+A S + V+ AK GRA+CK C + P LRMA +V SP D + + WYH CF
Sbjct: 1 MAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGK-VPHWYHFSCFWK 59
Query: 478 VLLKQRPNTKRVESINDIGNWDN 546
V R V+ +++ WD+
Sbjct: 60 VGHSIRHPDVEVDGFSEL-RWDD 81
>AL359704-4|CAH70215.1| 1014|Homo sapiens poly (ADP-ribose)
polymerase family, member 1 protein.
Length = 1014
Score = 54.8 bits (126), Expect = 2e-07
Identities = 30/83 (36%), Positives = 43/83 (51%)
Frame = +1
Query: 298 IAMSDSTPFYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQSMKSWYHVHCFTD 477
+A S + V+ AK GRA+CK C + P LRMA +V SP D + + WYH CF
Sbjct: 1 MAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGK-VPHWYHFSCFWK 59
Query: 478 VLLKQRPNTKRVESINDIGNWDN 546
V R V+ +++ WD+
Sbjct: 60 VGHSIRHPDVEVDGFSEL-RWDD 81
>AF524947-1|AAM75364.1| 1014|Homo sapiens ADP-ribosyltransferase
(NAD+; poly (ADP-ribose) polymerase) protein.
Length = 1014
Score = 54.8 bits (126), Expect = 2e-07
Identities = 30/83 (36%), Positives = 43/83 (51%)
Frame = +1
Query: 298 IAMSDSTPFYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQSMKSWYHVHCFTD 477
+A S + V+ AK GRA+CK C + P LRMA +V SP D + + WYH CF
Sbjct: 1 MAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGK-VPHWYHFSCFWK 59
Query: 478 VLLKQRPNTKRVESINDIGNWDN 546
V R V+ +++ WD+
Sbjct: 60 VGHSIRHPDVEVDGFSEL-RWDD 81
>J03473-1|AAB59447.1| 1014|Homo sapiens PPOL protein.
Length = 1014
Score = 51.6 bits (118), Expect = 2e-06
Identities = 29/83 (34%), Positives = 42/83 (50%)
Frame = +1
Query: 298 IAMSDSTPFYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQSMKSWYHVHCFTD 477
+A S + V+ AK RA+CK C + P LRMA +V SP D + + WYH CF
Sbjct: 1 MAESSDKLYRVEYAKSERASCKKCSESIPKDSLRMAIMVQSPMFDGK-VPHWYHFSCFWK 59
Query: 478 VLLKQRPNTKRVESINDIGNWDN 546
V R V+ +++ WD+
Sbjct: 60 VGHSIRHPDVEVDGFSEL-RWDD 81
>X16674-1|CAA34663.1| 40|Homo sapiens NAD(+)
ADP-ribosyltransferase protein.
Length = 40
Score = 35.9 bits (79), Expect = 0.096
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 298 IAMSDSTPFYVDRAKGGRAACKLCKGNCPSGELRMAKLV 414
+A S + V+ AK GRA+CK C + P LRMA +V
Sbjct: 1 MAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMV 39
>M60436-1|AAA60000.1| 40|Homo sapiens poly(ADP-ribose) polymerase
protein.
Length = 40
Score = 35.9 bits (79), Expect = 0.096
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 298 IAMSDSTPFYVDRAKGGRAACKLCKGNCPSGELRMAKLV 414
+A S + V+ AK GRA+CK C + P LRMA +V
Sbjct: 1 MAESSDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMV 39
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,891,703
Number of Sequences: 237096
Number of extensions: 1455103
Number of successful extensions: 2011
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2006
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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