Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14i06
(489 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 209 3e-54
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 209 3e-54
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 209 3e-54
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 209 3e-54
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 209 3e-54
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 209 3e-54
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 209 3e-54
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 209 3e-54
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 209 3e-54
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 209 3e-54
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 207 1e-53
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 200 3e-51
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 121 2e-27
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 121 2e-27
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 56 9e-08
AB011181-1|BAA25535.3| 769|Homo sapiens KIAA0609 protein protein. 31 2.8
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 209 bits (511), Expect = 3e-54
Identities = 91/148 (61%), Positives = 116/148 (78%)
Frame = +2
Query: 44 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 223
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 224 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 403
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 404 XXFCLKPGRNYCHVGRLSHEIGWKYRDV 487
LKP R + ++GRL+HE+GWKY+ V
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAV 152
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 209 bits (511), Expect = 3e-54
Identities = 91/148 (61%), Positives = 116/148 (78%)
Frame = +2
Query: 44 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 223
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 224 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 403
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 404 XXFCLKPGRNYCHVGRLSHEIGWKYRDV 487
LKP R + ++GRL+HE+GWKY+ V
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAV 152
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 209 bits (511), Expect = 3e-54
Identities = 91/148 (61%), Positives = 116/148 (78%)
Frame = +2
Query: 44 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 223
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 224 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 403
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 404 XXFCLKPGRNYCHVGRLSHEIGWKYRDV 487
LKP R + ++GRL+HE+GWKY+ V
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAV 152
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 209 bits (511), Expect = 3e-54
Identities = 91/148 (61%), Positives = 116/148 (78%)
Frame = +2
Query: 44 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 223
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 224 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 403
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 404 XXFCLKPGRNYCHVGRLSHEIGWKYRDV 487
LKP R + ++GRL+HE+GWKY+ V
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAV 152
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 209 bits (511), Expect = 3e-54
Identities = 91/148 (61%), Positives = 116/148 (78%)
Frame = +2
Query: 44 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 223
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 224 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 403
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 404 XXFCLKPGRNYCHVGRLSHEIGWKYRDV 487
LKP R + ++GRL+HE+GWKY+ V
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAV 152
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 209 bits (511), Expect = 3e-54
Identities = 91/148 (61%), Positives = 116/148 (78%)
Frame = +2
Query: 44 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 223
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 3 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 62
Query: 224 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 403
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 63 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 122
Query: 404 XXFCLKPGRNYCHVGRLSHEIGWKYRDV 487
LKP R + ++GRL+HE+GWKY+ V
Sbjct: 123 KVVRLKPTRKFAYLGRLAHEVGWKYQAV 150
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 209 bits (511), Expect = 3e-54
Identities = 91/148 (61%), Positives = 116/148 (78%)
Frame = +2
Query: 44 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 223
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 224 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 403
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 404 XXFCLKPGRNYCHVGRLSHEIGWKYRDV 487
LKP R + ++GRL+HE+GWKY+ V
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAV 152
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 209 bits (511), Expect = 3e-54
Identities = 91/148 (61%), Positives = 116/148 (78%)
Frame = +2
Query: 44 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 223
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 224 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 403
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 404 XXFCLKPGRNYCHVGRLSHEIGWKYRDV 487
LKP R + ++GRL+HE+GWKY+ V
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAV 152
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 209 bits (511), Expect = 3e-54
Identities = 91/148 (61%), Positives = 116/148 (78%)
Frame = +2
Query: 44 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 223
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 224 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 403
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 404 XXFCLKPGRNYCHVGRLSHEIGWKYRDV 487
LKP R + ++GRL+HE+GWKY+ V
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAV 152
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 209 bits (511), Expect = 3e-54
Identities = 91/148 (61%), Positives = 116/148 (78%)
Frame = +2
Query: 44 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 223
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 224 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 403
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 404 XXFCLKPGRNYCHVGRLSHEIGWKYRDV 487
LKP R + ++GRL+HE+GWKY+ V
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAV 152
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 207 bits (506), Expect = 1e-53
Identities = 90/148 (60%), Positives = 115/148 (77%)
Frame = +2
Query: 44 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 223
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 224 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 403
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL L+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDHLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 404 XXFCLKPGRNYCHVGRLSHEIGWKYRDV 487
LKP R + ++GRL+HE+GWKY+ V
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAV 152
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 200 bits (487), Expect = 3e-51
Identities = 87/148 (58%), Positives = 113/148 (76%)
Frame = +2
Query: 44 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 223
+ +V+DGRGHLLGRLAA++AK +L G KVVVV CE INISGNF+RNKL ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVCCEGINISGNFYRNKLNYLAFLRKRMNT 64
Query: 224 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 403
+P+RGP+HFRAPS++ W+TVRGM+PHKT+RG+ AL RL+ DG PPP+D
Sbjct: 65 SPSRGPYHFRAPSRVFWRTVRGMLPHKTKRGQAALDRLKVSDGIPPPYDKKKRMVVPAAL 124
Query: 404 XXFCLKPGRNYCHVGRLSHEIGWKYRDV 487
LKP R + ++GRL+HE+GWKY+ V
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAV 152
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 121 bits (291), Expect = 2e-27
Identities = 49/90 (54%), Positives = 65/90 (72%)
Frame = +2
Query: 218 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 397
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 398 XXXXFCLKPGRNYCHVGRLSHEIGWKYRDV 487
LKP R + ++GRL+HE+GWKY+ V
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAV 91
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 121 bits (291), Expect = 2e-27
Identities = 49/90 (54%), Positives = 65/90 (72%)
Frame = +2
Query: 218 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 397
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 398 XXXXFCLKPGRNYCHVGRLSHEIGWKYRDV 487
LKP R + ++GRL+HE+GWKY+ V
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAV 91
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 55.6 bits (128), Expect = 9e-08
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +2
Query: 290 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 469
M+ HKT+RG +L L+ +DG PPP+D LKP R + +GR + E+
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEVR 60
Query: 470 WKYRDV 487
WKY+ V
Sbjct: 61 WKYQAV 66
>AB011181-1|BAA25535.3| 769|Homo sapiens KIAA0609 protein protein.
Length = 769
Score = 30.7 bits (66), Expect = 2.8
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 81 AVWRQSSPRSFSKGTKLLWFAANKSISLATSLGTNSSLCHSCVRGAT*ILLVDLSIL 251
+ WRQS PR + +G + L A ++ +L + T+ + C RG L LS+L
Sbjct: 30 SAWRQSRPREYYEGGRGL-HAPDRETALGLGIATSERMLGIC-RGRRKFLAASLSLL 84
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,407,391
Number of Sequences: 237096
Number of extensions: 1616008
Number of successful extensions: 17789
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17774
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -