Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14h22
         (457 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06617-1|CAA29834.1|  158|Homo sapiens protein ( Human mRNA for ...   248   9e-66
BC100025-1|AAI00026.1|  158|Homo sapiens RPS11 protein protein.       248   9e-66
BC070224-1|AAH70224.1|  158|Homo sapiens ribosomal protein S11 p...   248   9e-66
BC016378-1|AAH16378.1|  158|Homo sapiens ribosomal protein S11 p...   248   9e-66
BC010028-1|AAH10028.1|  158|Homo sapiens ribosomal protein S11 p...   248   9e-66
BC007945-1|AAH07945.1|  158|Homo sapiens RPS11 protein protein.       248   9e-66
BC007603-1|AAH07603.1|  158|Homo sapiens ribosomal protein S11 p...   248   9e-66
BC007283-1|AAH07283.1|  158|Homo sapiens ribosomal protein S11 p...   248   9e-66
AB028893-2|BAA88215.1|  158|Homo sapiens ribosomal protein S11 p...   248   9e-66
AB007152-1|BAA25818.1|   83|Homo sapiens ribosomal protein S11 p...   146   2e-35
BC098386-1|AAH98386.1|  336|Homo sapiens vacuolar protein sortin...    29   5.7  
BC014128-1|AAH14128.1|  336|Homo sapiens vacuolar protein sortin...    29   5.7  
BC009747-1|AAH09747.1|  336|Homo sapiens vacuolar protein sortin...    29   5.7  

>X06617-1|CAA29834.1|  158|Homo sapiens protein ( Human mRNA for
           ribosomal protein S11. ).
          Length = 158

 Score =  248 bits (606), Expect = 9e-66
 Identities = 118/150 (78%), Positives = 133/150 (88%), Gaps = 6/150 (4%)
 Frame = +3

Query: 24  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 185
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 186 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 365
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120

Query: 366 EIGDIVTIGECRPLSKTVRFNVLKVSKGKG 455
           +IGDIVT+GECRPLSKTVRFNVLKV+K  G
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAG 150


>BC100025-1|AAI00026.1|  158|Homo sapiens RPS11 protein protein.
          Length = 158

 Score =  248 bits (606), Expect = 9e-66
 Identities = 118/150 (78%), Positives = 133/150 (88%), Gaps = 6/150 (4%)
 Frame = +3

Query: 24  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 185
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 186 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 365
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120

Query: 366 EIGDIVTIGECRPLSKTVRFNVLKVSKGKG 455
           +IGDIVT+GECRPLSKTVRFNVLKV+K  G
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAG 150


>BC070224-1|AAH70224.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  248 bits (606), Expect = 9e-66
 Identities = 118/150 (78%), Positives = 133/150 (88%), Gaps = 6/150 (4%)
 Frame = +3

Query: 24  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 185
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 186 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 365
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120

Query: 366 EIGDIVTIGECRPLSKTVRFNVLKVSKGKG 455
           +IGDIVT+GECRPLSKTVRFNVLKV+K  G
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAG 150


>BC016378-1|AAH16378.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  248 bits (606), Expect = 9e-66
 Identities = 118/150 (78%), Positives = 133/150 (88%), Gaps = 6/150 (4%)
 Frame = +3

Query: 24  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 185
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 186 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 365
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120

Query: 366 EIGDIVTIGECRPLSKTVRFNVLKVSKGKG 455
           +IGDIVT+GECRPLSKTVRFNVLKV+K  G
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAG 150


>BC010028-1|AAH10028.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  248 bits (606), Expect = 9e-66
 Identities = 118/150 (78%), Positives = 133/150 (88%), Gaps = 6/150 (4%)
 Frame = +3

Query: 24  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 185
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 186 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 365
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120

Query: 366 EIGDIVTIGECRPLSKTVRFNVLKVSKGKG 455
           +IGDIVT+GECRPLSKTVRFNVLKV+K  G
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAG 150


>BC007945-1|AAH07945.1|  158|Homo sapiens RPS11 protein protein.
          Length = 158

 Score =  248 bits (606), Expect = 9e-66
 Identities = 118/150 (78%), Positives = 133/150 (88%), Gaps = 6/150 (4%)
 Frame = +3

Query: 24  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 185
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 186 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 365
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120

Query: 366 EIGDIVTIGECRPLSKTVRFNVLKVSKGKG 455
           +IGDIVT+GECRPLSKTVRFNVLKV+K  G
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAG 150


>BC007603-1|AAH07603.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  248 bits (606), Expect = 9e-66
 Identities = 118/150 (78%), Positives = 133/150 (88%), Gaps = 6/150 (4%)
 Frame = +3

Query: 24  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 185
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 186 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 365
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120

Query: 366 EIGDIVTIGECRPLSKTVRFNVLKVSKGKG 455
           +IGDIVT+GECRPLSKTVRFNVLKV+K  G
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAG 150


>BC007283-1|AAH07283.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  248 bits (606), Expect = 9e-66
 Identities = 118/150 (78%), Positives = 133/150 (88%), Gaps = 6/150 (4%)
 Frame = +3

Query: 24  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 185
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 186 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 365
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120

Query: 366 EIGDIVTIGECRPLSKTVRFNVLKVSKGKG 455
           +IGDIVT+GECRPLSKTVRFNVLKV+K  G
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAG 150


>AB028893-2|BAA88215.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  248 bits (606), Expect = 9e-66
 Identities = 118/150 (78%), Positives = 133/150 (88%), Gaps = 6/150 (4%)
 Frame = +3

Query: 24  MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 185
           MAD QTE+A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1   MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60

Query: 186 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 365
           PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61  PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120

Query: 366 EIGDIVTIGECRPLSKTVRFNVLKVSKGKG 455
           +IGDIVT+GECRPLSKTVRFNVLKV+K  G
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKVTKAAG 150


>AB007152-1|BAA25818.1|   83|Homo sapiens ribosomal protein S11
           protein.
          Length = 83

 Score =  146 bits (355), Expect = 2e-35
 Identities = 66/75 (88%), Positives = 71/75 (94%)
 Frame = +3

Query: 231 VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLS 410
           VV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLS
Sbjct: 1   VVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLS 60

Query: 411 KTVRFNVLKVSKGKG 455
           KTVRFNVLKV+K  G
Sbjct: 61  KTVRFNVLKVTKAAG 75


>BC098386-1|AAH98386.1|  336|Homo sapiens vacuolar protein sorting
           26 homolog B (S. pombe) protein.
          Length = 336

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 6   FSLSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRH 113
           + L+  + D+ E+ + KQ  V L RKG + RK M H
Sbjct: 270 YYLNLVLIDEEERRYFKQQEVVLWRKGDIVRKSMSH 305


>BC014128-1|AAH14128.1|  336|Homo sapiens vacuolar protein sorting
           26 homolog B (S. pombe) protein.
          Length = 336

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 6   FSLSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRH 113
           + L+  + D+ E+ + KQ  V L RKG + RK M H
Sbjct: 270 YYLNLVLIDEEERRYFKQQEVVLWRKGDIVRKSMSH 305


>BC009747-1|AAH09747.1|  336|Homo sapiens vacuolar protein sorting
           26 homolog B (S. pombe) protein.
          Length = 336

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 6   FSLSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRH 113
           + L+  + D+ E+ + KQ  V L RKG + RK M H
Sbjct: 270 YYLNLVLIDEEERRYFKQQEVVLWRKGDIVRKSMSH 305


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,792,962
Number of Sequences: 237096
Number of extensions: 1352144
Number of successful extensions: 2579
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2570
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)