Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14h17
         (459 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113486-1|AAM29491.1|  294|Drosophila melanogaster RE45450p pro...   136   1e-32
AE014296-1910|AAF50091.1|  294|Drosophila melanogaster CG7636-PA...   136   1e-32
X12528-1|CAC32035.1|   77|Drosophila melanogaster rough homeobox...    27   9.2  
M23629-1|AAA56800.1|  350|Drosophila melanogaster developmental ...    27   9.2  
BT022142-1|AAY51537.1|  350|Drosophila melanogaster IP01518p pro...    27   9.2  
AE014297-4017|AAN14093.1|  350|Drosophila melanogaster CG6348-PB...    27   9.2  
AE014297-4016|AAF56635.1|  350|Drosophila melanogaster CG6348-PA...    27   9.2  

>AY113486-1|AAM29491.1|  294|Drosophila melanogaster RE45450p
           protein.
          Length = 294

 Score =  136 bits (330), Expect = 1e-32
 Identities = 60/99 (60%), Positives = 77/99 (77%)
 Frame = +2

Query: 161 IEKPKPGFGKSYRRIVHFPEQYTVKPLEVTNLAGRDPETGRVVAXXXXXXXXHKYHWIDW 340
           +EKPKPG G+ +RR VHFPE+YTV+PL++T+LAGRDP +GR+VA         +Y W+ W
Sbjct: 35  VEKPKPGAGQQFRRTVHFPEKYTVEPLKITHLAGRDPVSGRLVAKGIGGGIKQQYRWVKW 94

Query: 341 YRVGPTEGPPQEEKVIQIIEDGCRTAHVALVAVGDKLKY 457
            R GPTEG  QEE V++++ DGCRTA VALVAVGD+LKY
Sbjct: 95  VRDGPTEG-AQEELVLEVLRDGCRTAKVALVAVGDELKY 132


>AE014296-1910|AAF50091.1|  294|Drosophila melanogaster CG7636-PA
           protein.
          Length = 294

 Score =  136 bits (330), Expect = 1e-32
 Identities = 60/99 (60%), Positives = 77/99 (77%)
 Frame = +2

Query: 161 IEKPKPGFGKSYRRIVHFPEQYTVKPLEVTNLAGRDPETGRVVAXXXXXXXXHKYHWIDW 340
           +EKPKPG G+ +RR VHFPE+YTV+PL++T+LAGRDP +GR+VA         +Y W+ W
Sbjct: 35  VEKPKPGAGQQFRRTVHFPEKYTVEPLKITHLAGRDPVSGRLVAKGIGGGIKQQYRWVKW 94

Query: 341 YRVGPTEGPPQEEKVIQIIEDGCRTAHVALVAVGDKLKY 457
            R GPTEG  QEE V++++ DGCRTA VALVAVGD+LKY
Sbjct: 95  VRDGPTEG-AQEELVLEVLRDGCRTAKVALVAVGDELKY 132


>X12528-1|CAC32035.1|   77|Drosophila melanogaster rough homeobox
           protein protein.
          Length = 77

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -3

Query: 181 TRFRLFYIGFTRRMNNTNVKISSRHHRSSDG*VRKKPV*GHY 56
           +R R F +  T R+  T +KI  ++ R+ D  + K  +  HY
Sbjct: 36  SRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKAQIDQHY 77


>M23629-1|AAA56800.1|  350|Drosophila melanogaster developmental
           protein protein.
          Length = 350

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -3

Query: 181 TRFRLFYIGFTRRMNNTNVKISSRHHRSSDG*VRKKPV*GHY 56
           +R R F +  T R+  T +KI  ++ R+ D  + K  +  HY
Sbjct: 217 SRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKAQIDQHY 258


>BT022142-1|AAY51537.1|  350|Drosophila melanogaster IP01518p
           protein.
          Length = 350

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -3

Query: 181 TRFRLFYIGFTRRMNNTNVKISSRHHRSSDG*VRKKPV*GHY 56
           +R R F +  T R+  T +KI  ++ R+ D  + K  +  HY
Sbjct: 217 SRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKAQIDQHY 258


>AE014297-4017|AAN14093.1|  350|Drosophila melanogaster CG6348-PB,
           isoform B protein.
          Length = 350

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -3

Query: 181 TRFRLFYIGFTRRMNNTNVKISSRHHRSSDG*VRKKPV*GHY 56
           +R R F +  T R+  T +KI  ++ R+ D  + K  +  HY
Sbjct: 217 SRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKAQIDQHY 258


>AE014297-4016|AAF56635.1|  350|Drosophila melanogaster CG6348-PA,
           isoform A protein.
          Length = 350

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -3

Query: 181 TRFRLFYIGFTRRMNNTNVKISSRHHRSSDG*VRKKPV*GHY 56
           +R R F +  T R+  T +KI  ++ R+ D  + K  +  HY
Sbjct: 217 SRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKAQIDQHY 258


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,587,122
Number of Sequences: 53049
Number of extensions: 425021
Number of successful extensions: 1329
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1327
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)