Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14h17
(459 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 64 5e-11
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 29 1.2
AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical ... 29 1.6
U41021-5|AAA82335.2| 652|Caenorhabditis elegans Hypothetical pr... 28 3.8
L10986-7|AAA28014.2| 362|Caenorhabditis elegans Hypothetical pr... 28 3.8
AY887908-1|AAX34420.1| 652|Caenorhabditis elegans anion transpo... 28 3.8
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 27 5.0
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 27 5.0
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 27 5.0
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 27 5.0
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 27 5.0
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 27 5.0
U23518-3|AAC70885.1| 109|Caenorhabditis elegans Hypothetical pr... 27 6.6
AF125446-1|AAY86267.1| 198|Caenorhabditis elegans Hypothetical ... 27 6.6
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transport... 27 8.7
AF067947-5|AAO25993.2| 380|Caenorhabditis elegans Hypothetical ... 27 8.7
AC024817-35|AAP13745.1| 232|Caenorhabditis elegans Hypothetical... 27 8.7
AC024817-34|AAK68529.2| 249|Caenorhabditis elegans Hypothetical... 27 8.7
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 64.1 bits (149), Expect = 5e-11
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +2
Query: 221 QYTVKPLEVTNLAGRDPETGRVVAXXXXXXXXHKYHWIDWYRVGPT-EGPPQEEKVIQII 397
QYT KPL + L GRDPETGR V Y ID++R GP +G +E++++I
Sbjct: 52 QYTHKPLRINRLGGRDPETGRKVNQHIGGGVKFDYFMIDFHRRGPADQGATYDERILEIR 111
Query: 398 EDGCRTAHVALVA 436
D RT H+AL A
Sbjct: 112 RDPNRTCHIALCA 124
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 87 KLEKSLFKAIIYLILKLKHKTVDGRLFGS 1
K E SL + + + +L H +DG++FGS
Sbjct: 213 KHEFSLHRTCMATVGRLSHADIDGKIFGS 241
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 344 RVGPTEGPPQEEKVIQIIEDGC 409
R+G TE PP+ E IQ ++D C
Sbjct: 14 RIGSTELPPRVENAIQFLDDQC 35
>AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical
protein B0019.1 protein.
Length = 724
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +2
Query: 47 IKYIMALNRLFSNLTIATAMVARRNLHV--GVVHSA 148
+KY+ + L+ N+ IATA +A NL G VH+A
Sbjct: 437 LKYLNDFHTLYQNVHIATADIASHNLGTMNGAVHAA 472
>U41021-5|AAA82335.2| 652|Caenorhabditis elegans Hypothetical
protein F14D12.5 protein.
Length = 652
Score = 27.9 bits (59), Expect = 3.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 172 ETWFRKKLQAYCTF 213
ETW +KK+ YCTF
Sbjct: 18 ETWVKKKINNYCTF 31
>L10986-7|AAA28014.2| 362|Caenorhabditis elegans Hypothetical
protein F10E9.3 protein.
Length = 362
Score = 27.9 bits (59), Expect = 3.8
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = -1
Query: 441 PTATKATCAVLHPSSIICITFSSCGGPSVGPTLYQSIQ*YLCFIPPPIPLATTRPVSGSL 262
P AT ++ H SS + S+ G PSVG Y +PPP+P + R ++GS+
Sbjct: 140 PIATTRFASLRHLSSAPGTSASTSGSPSVGIRKYG--------VPPPMP-RSLRNIAGSI 190
>AY887908-1|AAX34420.1| 652|Caenorhabditis elegans anion
transporter SULP-2 protein.
Length = 652
Score = 27.9 bits (59), Expect = 3.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 172 ETWFRKKLQAYCTF 213
ETW +KK+ YCTF
Sbjct: 18 ETWVKKKINNYCTF 31
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.5 bits (58), Expect = 5.0
Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = +2
Query: 182 FGKSYRRIVH-FPEQYTVKPLEVTNLAGRDPETGRVVAXXXXXXXXHKYHWIDWYRVGPT 358
FG + IVH P V N G + V H + W R+
Sbjct: 2203 FGNAILTIVHVLPHDSGVYTCRAWNTQGEASTSATVTTAGYEKILYDSQHPVSWERIQEL 2262
Query: 359 EGPPQEEKVIQIIE 400
E P E++ +I++
Sbjct: 2263 EAPKIVEEIEEIVQ 2276
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 27.5 bits (58), Expect = 5.0
Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = +2
Query: 182 FGKSYRRIVH-FPEQYTVKPLEVTNLAGRDPETGRVVAXXXXXXXXHKYHWIDWYRVGPT 358
FG + IVH P V N G + V H + W R+
Sbjct: 2120 FGNAILTIVHVLPHDSGVYTCRAWNTQGEASTSATVTTAGYEKILYDSQHPVSWERIQEL 2179
Query: 359 EGPPQEEKVIQIIE 400
E P E++ +I++
Sbjct: 2180 EAPKIVEEIEEIVQ 2193
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 27.5 bits (58), Expect = 5.0
Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = +2
Query: 182 FGKSYRRIVH-FPEQYTVKPLEVTNLAGRDPETGRVVAXXXXXXXXHKYHWIDWYRVGPT 358
FG + IVH P V N G + V H + W R+
Sbjct: 2441 FGNAILTIVHVLPHDSGVYTCRAWNTQGEASTSATVTTAGYEKILYDSQHPVSWERIQEL 2500
Query: 359 EGPPQEEKVIQIIE 400
E P E++ +I++
Sbjct: 2501 EAPKIVEEIEEIVQ 2514
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 27.5 bits (58), Expect = 5.0
Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = +2
Query: 182 FGKSYRRIVH-FPEQYTVKPLEVTNLAGRDPETGRVVAXXXXXXXXHKYHWIDWYRVGPT 358
FG + IVH P V N G + V H + W R+
Sbjct: 2441 FGNAILTIVHVLPHDSGVYTCRAWNTQGEASTSATVTTAGYEKILYDSQHPVSWERIQEL 2500
Query: 359 EGPPQEEKVIQIIE 400
E P E++ +I++
Sbjct: 2501 EAPKIVEEIEEIVQ 2514
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 27.5 bits (58), Expect = 5.0
Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = +2
Query: 182 FGKSYRRIVH-FPEQYTVKPLEVTNLAGRDPETGRVVAXXXXXXXXHKYHWIDWYRVGPT 358
FG + IVH P V N G + V H + W R+
Sbjct: 2441 FGNAILTIVHVLPHDSGVYTCRAWNTQGEASTSATVTTAGYEKILYDSQHPVSWERIQEL 2500
Query: 359 EGPPQEEKVIQIIE 400
E P E++ +I++
Sbjct: 2501 EAPKIVEEIEEIVQ 2514
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.5 bits (58), Expect = 5.0
Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = +2
Query: 182 FGKSYRRIVH-FPEQYTVKPLEVTNLAGRDPETGRVVAXXXXXXXXHKYHWIDWYRVGPT 358
FG + IVH P V N G + V H + W R+
Sbjct: 2136 FGNAILTIVHVLPHDSGVYTCRAWNTQGEASTSATVTTAGYEKILYDSQHPVSWERIQEL 2195
Query: 359 EGPPQEEKVIQIIE 400
E P E++ +I++
Sbjct: 2196 EAPKIVEEIEEIVQ 2209
>U23518-3|AAC70885.1| 109|Caenorhabditis elegans Hypothetical
protein F21D12.5 protein.
Length = 109
Score = 27.1 bits (57), Expect = 6.6
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = +2
Query: 377 EKVIQIIEDGCRTAHVA 427
+K++++ E+GCR +H+A
Sbjct: 30 KKIVRLYEEGCRVSHIA 46
>AF125446-1|AAY86267.1| 198|Caenorhabditis elegans Hypothetical
protein R05C11.4 protein.
Length = 198
Score = 27.1 bits (57), Expect = 6.6
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -1
Query: 357 VGPTLYQSIQ*YLCFIPPPI 298
+ P +Y++ Y CF+PPP+
Sbjct: 149 IPPKMYEAPPPYECFVPPPV 168
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
F36H2.3 protein.
Length = 1388
Score = 26.6 bits (56), Expect = 8.7
Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 4/86 (4%)
Frame = -1
Query: 447 LSPTATKATCAVLHPSSIICITFSSCGGPSVGPTLYQSIQ*YL----CFIPPPIPLATTR 280
L T AT L+ +++ ++SSC PTL C+ PP P+ T
Sbjct: 1208 LHSAGTTATLTCLNSATLTGSSYSSCSNGVWTPTLGSCTSSGTGTGPCYTPPLTPVGATL 1267
Query: 279 PVSGSLPARFVTSKGFTVYCSGKCTI 202
S A + T+ C T+
Sbjct: 1268 TYSSGYFAPWTAGSTATMSCPAGQTV 1293
>AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transporter
family protein 4 protein.
Length = 1802
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 421 MRSSASIFYNLYNFFFLWWTLSRPNSV-PVYPVIFVFYTS 305
M+ + ++FY FFF WT P V PV ++ + +TS
Sbjct: 950 MQHAKAMFYKRAIFFFRKWTQFLPQLVFPVAYLVLMVFTS 989
>AF067947-5|AAO25993.2| 380|Caenorhabditis elegans Hypothetical
protein T10B5.2 protein.
Length = 380
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 349 WAY*GSTTRRKSYTDYRRWMQNCA 420
W + + RRK Y YRRWM+ A
Sbjct: 44 WDWTLTRHRRKRYQKYRRWMEGRA 67
>AC024817-35|AAP13745.1| 232|Caenorhabditis elegans Hypothetical
protein Y54G2A.5b protein.
Length = 232
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +2
Query: 143 SASKPNIEKPKPGFGKSYRRIVHFPEQYTVKPL---EVTNLAGRDPETG 280
SA +EKPK G RR+V E TV P+ E N+ TG
Sbjct: 52 SAMDDGVEKPKVIDGGRARRVVEEEEPKTVSPMCMEEFRNILQNGVSTG 100
>AC024817-34|AAK68529.2| 249|Caenorhabditis elegans Hypothetical
protein Y54G2A.5a protein.
Length = 249
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +2
Query: 143 SASKPNIEKPKPGFGKSYRRIVHFPEQYTVKPL---EVTNLAGRDPETG 280
SA +EKPK G RR+V E TV P+ E N+ TG
Sbjct: 52 SAMDDGVEKPKVIDGGRARRVVEEEEPKTVSPMCMEEFRNILQNGVSTG 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,798,599
Number of Sequences: 27780
Number of extensions: 229990
Number of successful extensions: 644
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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