Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14h07
(449 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0333 + 20333243-20333329,20335048-20335110,20335276-203353... 169 9e-43
03_02_0544 - 9362615-9362674,9362783-9362857,9362934-9363144,936... 168 2e-42
05_03_0407 + 13582595-13582681,13583067-13583129,13583289-135833... 168 2e-42
07_01_1091 - 10015180-10015236,10015705-10015779,10015874-100161... 167 4e-42
01_01_1165 - 9267891-9268145,9268395-9268510,9268991-9269127,926... 57 6e-09
12_02_1229 + 27197464-27197481,27200438-27201583,27201935-272022... 55 3e-08
01_05_0559 + 23281408-23282457,23282580-23282942,23283938-232839... 32 0.19
11_06_0148 + 20631949-20632338,20632838-20633044,20633168-206332... 32 0.24
09_03_0047 - 11867302-11867356,11867461-11868032,11868485-118688... 29 1.3
01_06_0404 + 29098141-29098214,29098459-29098673,29099491-290995... 29 2.3
03_06_0165 - 32108697-32109788 28 3.0
08_02_0598 - 19149218-19149524,19150325-19150896,19151374-191517... 28 4.0
11_04_0455 + 17903921-17904046,17904149-17904214,17905028-179051... 27 5.3
08_01_0016 - 109152-109214,109296-109385,109853-109954,110046-11... 27 5.3
05_03_0287 - 11639070-11639663 27 5.3
01_07_0051 - 40759529-40759624,40759728-40759835,40759972-407601... 27 7.0
03_06_0628 - 35179951-35180265,35180653-35180889,35180982-351811... 27 9.2
01_07_0052 - 40767252-40767347,40767455-40767562,40767689-407678... 27 9.2
>05_04_0333 +
20333243-20333329,20335048-20335110,20335276-20335359,
20335720-20335827,20335969-20336141,20337135-20337246,
20337468-20337548,20337635-20337697,20337779-20337880,
20338070-20338194,20338317-20338527,20338625-20338699,
20338990-20339043
Length = 445
Score = 169 bits (411), Expect = 9e-43
Identities = 81/129 (62%), Positives = 98/129 (75%), Gaps = 1/129 (0%)
Frame = +1
Query: 64 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAP- 240
MDEEYDVIVLGTGLKECILSG+LSV G KVLH+DRN YYGG+S S+ L +L+ +F
Sbjct: 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKRFRGED 59
Query: 241 APDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKVP 420
P G RD+NVD++PKF+MANG LV+ LIHT VT+YL FK+++GSYV+ GKI KVP
Sbjct: 60 KPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 119
Query: 421 VDQKEALAS 447
EAL S
Sbjct: 120 ATDMEALKS 128
>03_02_0544 -
9362615-9362674,9362783-9362857,9362934-9363144,
9363279-9363403,9363492-9363593,9363676-9363738,
9363817-9363897,9364248-9364359,9364454-9364626,
9364722-9364829,9364909-9364992,9365131-9365193,
9365652-9365738
Length = 447
Score = 168 bits (409), Expect = 2e-42
Identities = 82/130 (63%), Positives = 102/130 (78%), Gaps = 2/130 (1%)
Frame = +1
Query: 64 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKF--NA 237
MDEEYDVIVLGTGLKECI+SG+LSV G KVLH+DRN YYGGES S+ L +L+ +F N
Sbjct: 1 MDEEYDVIVLGTGLKECIISGLLSVDGLKVLHMDRNDYYGGESTSLN-LTKLWKRFKGNE 59
Query: 238 PAPDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKV 417
AP E G +++NVD++PKF+MANG LV++LIHT VT+YL FK+++GS+VY GKI KV
Sbjct: 60 TAP-EHLGVSKEYNVDMVPKFMMANGALVRVLIHTSVTKYLNFKAVDGSFVYNNGKIHKV 118
Query: 418 PVDQKEALAS 447
P EAL S
Sbjct: 119 PATDVEALKS 128
>05_03_0407 +
13582595-13582681,13583067-13583129,13583289-13583372,
13583757-13583864,13584018-13584190,13585190-13585301,
13585424-13585504,13585611-13585673,13585764-13585865,
13586063-13586187,13586316-13586526,13586614-13586688,
13586950-13587003
Length = 445
Score = 168 bits (408), Expect = 2e-42
Identities = 80/129 (62%), Positives = 98/129 (75%), Gaps = 1/129 (0%)
Frame = +1
Query: 64 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAP- 240
MDEEYDVIVLGTGLKECILSG+LSV G KVLH+DRN YYGG+S S+ L +L+ +F
Sbjct: 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKRFRGED 59
Query: 241 APDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKVP 420
P G +D+NVD++PKF+MANG LV+ LIHT VT+YL FK+++GSYV+ GKI KVP
Sbjct: 60 KPPAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 119
Query: 421 VDQKEALAS 447
EAL S
Sbjct: 120 ATDMEALKS 128
>07_01_1091 -
10015180-10015236,10015705-10015779,10015874-10016149,
10016204-10016332,10017070-10017171,10017626-10017688,
10017776-10017856,10018218-10018314,10019064-10019236,
10019327-10019434,10019706-10019789,10019985-10020047,
10020483-10020569
Length = 464
Score = 167 bits (406), Expect = 4e-42
Identities = 81/129 (62%), Positives = 98/129 (75%), Gaps = 1/129 (0%)
Frame = +1
Query: 64 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPA 243
MD EYDVIVLGTGLKECILSG+LSV KVLH+DRN YYGG+S S+ L +L+ +F
Sbjct: 1 MDVEYDVIVLGTGLKECILSGLLSVDRLKVLHMDRNDYYGGDSTSLN-LNQLWKRFKGEG 59
Query: 244 -PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKVP 420
P G RD+NVD+IPKF+MANG LV++LIHTGVT+YL FK+++GSYV+ GKI KVP
Sbjct: 60 TPPAQIGASRDYNVDMIPKFMMANGTLVRVLIHTGVTKYLSFKAVDGSYVFNKGKIHKVP 119
Query: 421 VDQKEALAS 447
EAL S
Sbjct: 120 STDMEALKS 128
>01_01_1165 -
9267891-9268145,9268395-9268510,9268991-9269127,
9269645-9269808,9269892-9269972,9270783-9270962,
9271489-9271929,9273234-9273344,9274355-9274463,
9274618-9274643,9274823-9274903,9275013-9275211,
9275374-9275449,9275553-9275769,9276117-9276155,
9276684-9276783,9276962-9277084,9277171-9277895
Length = 1059
Score = 57.2 bits (132), Expect = 6e-09
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 31/161 (19%)
Frame = +1
Query: 52 YTIIMDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKF 231
Y I +DV++ GTGL E +L+ + +GK VLH+D N +YG +S+ PL L +
Sbjct: 16 YPTIDPTSFDVVLCGTGLPESVLAAACAAAGKTVLHVDPNPFYGSLFSSL-PLPSLPSFL 74
Query: 232 N-------APAPD------------------ETYGR----GRDWNVDLI-PKFLMANGLL 321
+ AP+P ET G R + DL+ P+ L
Sbjct: 75 SPSPSDDPAPSPSPSSAAAVDLRRRSPYSEVETSGAVPEPSRRFTADLVGPRLLYCADEA 134
Query: 322 VKLLIHTGVTRYLEFKSIE-GSYVYKGGKISKVPVDQKEAL 441
V LL+ +G + ++EFKS+E G+ +Y G + VP D ++A+
Sbjct: 135 VDLLLRSGGSHHVEFKSVEGGTLLYWDGDLYPVP-DSRQAI 174
>12_02_1229 +
27197464-27197481,27200438-27201583,27201935-27202201,
27202849-27202882,27202997-27203100,27203174-27203308,
27203367-27203511,27203864-27203880
Length = 621
Score = 54.8 bits (126), Expect = 3e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 64 MDEEYDVIVLGTGLKECILSGMLSVSGKKVL 156
MDEEYDVIVLGTGL ECILSG+LSV G K +
Sbjct: 449 MDEEYDVIVLGTGLMECILSGLLSVDGLKFI 479
>01_05_0559 +
23281408-23282457,23282580-23282942,23283938-23283991,
23284088-23284156
Length = 511
Score = 32.3 bits (70), Expect = 0.19
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +1
Query: 79 DVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYG---GESASITPLEEL 219
++I++ TGLK CI + ++G VL + N G GE A + +E+L
Sbjct: 265 EIILMNTGLKSCIPPELGMLTGLAVLDVSHNSLMGAIPGELARLENIEQL 314
>11_06_0148 +
20631949-20632338,20632838-20633044,20633168-20633267,
20633478-20633560,20633656-20633712,20633790-20633942,
20634016-20634094,20634279-20634427,20634541-20634675,
20634783-20634896,20635065-20635175,20635338-20635373,
20635675-20635884
Length = 607
Score = 31.9 bits (69), Expect = 0.24
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 73 EYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGES 192
EYD IV+G+G+ + + L+ G +VL +++ GG S
Sbjct: 68 EYDAIVVGSGIGGMVAATQLAAKGARVLVLEKYVIPGGSS 107
>09_03_0047 -
11867302-11867356,11867461-11868032,11868485-11868873,
11869018-11869331,11871028-11871382,11872004-11872076
Length = 585
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +1
Query: 70 EEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPAPD 249
E YD IV+G G C L+ LS+ K +L YG + S +E + APD
Sbjct: 49 ETYDYIVVGGGTAGCPLAATLSLKYKVLLLERGGSPYGNRNVSY--MENFHIGLSNMAPD 106
>01_06_0404 +
29098141-29098214,29098459-29098673,29099491-29099596,
29099686-29100235,29100332-29100429,29100519-29100764,
29100867-29100981,29101092-29101305,29101402-29101991
Length = 735
Score = 28.7 bits (61), Expect = 2.3
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -3
Query: 426 IDRYFGDFSTFVNITSFDGLKLQVPGDARVNKQFD*QSISHQKLRNQVNVPVSTSTVCF 250
+DR F + TF +TS +K Q ++ + Q ++ + K N NVP ST+CF
Sbjct: 295 MDRDFPAYVTFGGVTSSMTIKGQSLSNSTL-PQGQRYAMINAKNANAANVPSENSTLCF 352
>03_06_0165 - 32108697-32109788
Length = 363
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +1
Query: 151 VLHIDRNKYYGGESASITPLEELFAKFNAPAPDETYGRGRDWNVDLIPKFLMANGLLVKL 330
++ ID + E + P+EE + P P + + R++ V L P+F++ + K+
Sbjct: 158 IMDIDPTYWCSSEVLAYDPVEECWCW--GPLPQPPFFQDREYKVPLKPRFMVVDS--TKI 213
Query: 331 LIHTGVTRY 357
+ T Y
Sbjct: 214 CVSTTTATY 222
>08_02_0598 -
19149218-19149524,19150325-19150896,19151374-19151762,
19151850-19152163,19152312-19152356,19153451-19153805,
19154361-19154430
Length = 683
Score = 27.9 bits (59), Expect = 4.0
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 52 YTIIMDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 198
++ I E YD I++G G C L+ LS K +L YG + S
Sbjct: 42 FSRIQHEAYDYIIVGGGTAGCPLAATLSQKYKVLLLERGGSPYGNRNIS 90
>11_04_0455 +
17903921-17904046,17904149-17904214,17905028-17905116,
17905513-17905658,17905743-17905867,17905964-17906057,
17906144-17906307,17906449-17906610,17906683-17906809,
17906854-17906862,17906912-17907078,17907113-17907307,
17907398-17907490
Length = 520
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 181 GGESASITPLEELFAKFNAPAPDETYGRGRDWNVDLIPKFLMANGLLV 324
GG + T LEEL A+F +G G N +IP + GL++
Sbjct: 142 GGTTKLHTELEELVARFVGKPAAILFGMGYVTNSAIIPCLVGKGGLII 189
>08_01_0016 -
109152-109214,109296-109385,109853-109954,110046-110213,
110510-110530,110836-110896,110987-111099,112125-112202,
112294-112434,112532-112696,112776-112868,113096-113162,
113285-113388,113896-114041,114303-114579
Length = 562
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 118 LSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPAP 246
L G+L + KK+ H N+ G AS+ LE+L P P
Sbjct: 101 LGGLLILLPKKLNHEPNNEDKGQVKASLAELEQLLLHQQVPYP 143
>05_03_0287 - 11639070-11639663
Length = 197
Score = 27.5 bits (58), Expect = 5.3
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = +1
Query: 97 TGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPAPDETYGRGRDW 276
T KE + + +G V H KY TP E F F D +YG+G W
Sbjct: 33 TPAKETYKGSLATAAGVVVFH----KYEAPAGTPKTPQGERFKVFGVRNADGSYGKGLFW 88
>01_07_0051 -
40759529-40759624,40759728-40759835,40759972-40760138,
40760670-40760796,40760885-40761046,40761235-40761398,
40761561-40761654,40761736-40761860,40762304-40762449,
40762796-40762884,40763453-40763518,40763824-40763973
Length = 497
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 181 GGESASITPLEELFAKFNAPAPDETYGRGRDWNVDLIPKFLMANGLLV 324
GG + LEEL A+F +G G N +IP + GL++
Sbjct: 150 GGNTKLHVELEELVARFVGKPAAILFGMGYVTNSAIIPALIGKGGLII 197
>03_06_0628 -
35179951-35180265,35180653-35180889,35180982-35181140,
35181673-35181864,35182696-35182983,35183289-35183342,
35183561-35183671,35183780-35184011,35184097-35184302
Length = 597
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 73 EYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 198
E DV+V+G+G+ +G+L+ + VL ++ + GG + S
Sbjct: 75 EADVVVIGSGIGGLCCAGLLARYNQDVLVLESHDRPGGAAHS 116
>01_07_0052 -
40767252-40767347,40767455-40767562,40767689-40767855,
40767930-40768056,40768138-40768299,40768467-40768630,
40768722-40768815,40768892-40769016,40769110-40769255,
40769361-40769449,40769564-40769608,40770165-40770230,
40770332-40770457
Length = 504
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 181 GGESASITPLEELFAKFNAPAPDETYGRGRDWNVDLIPKFLMANGLLV 324
GG + LEEL A+F +G G N +IP + GL++
Sbjct: 157 GGNTKLHVELEELVARFVGKPAAILFGMGYVTNSAIIPALVGKGGLII 204
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,361,534
Number of Sequences: 37544
Number of extensions: 258851
Number of successful extensions: 771
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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