Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14g12
         (629 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U84750-1|AAB88068.1|  101|Drosophila melanogaster cuticle protei...    30   3.0  
AY113609-1|AAM29614.1|  105|Drosophila melanogaster RH61147p pro...    30   3.0  
AE014296-1086|AAF50685.2|  105|Drosophila melanogaster CG10297-P...    30   3.0  
AY121704-1|AAM52031.1|  314|Drosophila melanogaster RH36510p pro...    29   6.9  
AE014134-1997|AAF53040.1|  539|Drosophila melanogaster CG6093-PA...    29   6.9  
AJ277190-1|CAB85485.1|  580|Drosophila melanogaster mod(mdg4)64....    28   9.1  
AE014297-3002|AAN13875.1|  580|Drosophila melanogaster CG32491-P...    28   9.1  

>U84750-1|AAB88068.1|  101|Drosophila melanogaster cuticle protein
           ACP65A protein.
          Length = 101

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 457 INNAGKVTESIGRHNHDPPTCWMTPDGKSYSLPPLPDKN 573
           +NNAG   ESI          W+ PDG++Y++  + D+N
Sbjct: 55  VNNAGTDNESISIRGS---VTWVAPDGQTYTINFVADEN 90


>AY113609-1|AAM29614.1|  105|Drosophila melanogaster RH61147p
           protein.
          Length = 105

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 457 INNAGKVTESIGRHNHDPPTCWMTPDGKSYSLPPLPDKN 573
           +NNAG   ESI          W+ PDG++Y++  + D+N
Sbjct: 59  VNNAGTDNESISIRGS---VTWVAPDGQTYTINFVADEN 94


>AE014296-1086|AAF50685.2|  105|Drosophila melanogaster CG10297-PA
           protein.
          Length = 105

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 457 INNAGKVTESIGRHNHDPPTCWMTPDGKSYSLPPLPDKN 573
           +NNAG   ESI          W+ PDG++Y++  + D+N
Sbjct: 59  VNNAGTDNESISIRGS---VTWVAPDGQTYTINFVADEN 94


>AY121704-1|AAM52031.1|  314|Drosophila melanogaster RH36510p
           protein.
          Length = 314

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -1

Query: 497 CLPILSVTFPALFIRSFA--GQHLLKKYQQYHSWLPYAF 387
           CL I S+T P +++R F   G+ LL   Q   S L Y++
Sbjct: 49  CLTIDSITIPPIYLRKFTPDGRKLLAFSQDQRSLLIYSY 87


>AE014134-1997|AAF53040.1|  539|Drosophila melanogaster CG6093-PA
           protein.
          Length = 539

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -1

Query: 497 CLPILSVTFPALFIRSFA--GQHLLKKYQQYHSWLPYAF 387
           CL I S+T P +++R F   G+ LL   Q   S L Y++
Sbjct: 49  CLTIDSITIPPIYLRKFTPDGRKLLAFSQDQRSLLIYSY 87


>AJ277190-1|CAB85485.1|  580|Drosophila melanogaster mod(mdg4)64.2
           protein.
          Length = 580

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/63 (22%), Positives = 28/63 (44%)
 Frame = +1

Query: 319 FINTRGNSKLFIYQNHTFRFMYKKAYGSQLWYCWYFFSRCCPAKLRINNAGKVTESIGRH 498
           FI ++  +   +++N+ +     +A G   W C       C A + I   G   ++  +H
Sbjct: 408 FIRSQKKNAQLVFRNYIYNKKLTQANGQTTWRCADVLKLRCKAVV-ITRDGHFIDARRQH 466

Query: 499 NHD 507
           NH+
Sbjct: 467 NHE 469


>AE014297-3002|AAN13875.1|  580|Drosophila melanogaster CG32491-PN,
           isoform N protein.
          Length = 580

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/63 (22%), Positives = 28/63 (44%)
 Frame = +1

Query: 319 FINTRGNSKLFIYQNHTFRFMYKKAYGSQLWYCWYFFSRCCPAKLRINNAGKVTESIGRH 498
           FI ++  +   +++N+ +     +A G   W C       C A + I   G   ++  +H
Sbjct: 408 FIRSQKKNAQLVFRNYIYNKKLTQANGQTTWRCADVLKLRCKAVV-ITRDGHFIDARRQH 466

Query: 499 NHD 507
           NH+
Sbjct: 467 NHE 469


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,096,403
Number of Sequences: 53049
Number of extensions: 528006
Number of successful extensions: 892
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)