Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14f23
(495 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 33 0.13
11_01_0791 + 6627961-6630702 30 0.89
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701... 30 1.2
11_04_0450 - 17847676-17847841,17848024-17848131,17848223-178483... 29 2.1
06_02_0345 + 14833838-14833997,14834095-14834552,14834633-148348... 28 3.6
03_05_0625 - 26225201-26225879,26226706-26227553 28 3.6
12_01_0610 + 5030130-5030247,5030957-5033193 28 4.7
11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171... 28 4.7
08_02_0316 + 15690452-15690555,15690871-15690965,15693707-156937... 28 4.7
02_04_0209 - 20942021-20942181,20942354-20942420,20942651-209427... 28 4.7
12_01_0633 - 5241098-5241283,5241361-5241453,5241555-5241615,524... 27 6.3
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 27 6.3
10_08_0731 + 20161962-20163628,20163721-20163862,20164181-201644... 27 6.3
10_08_0472 - 18154797-18155048,18155332-18156318,18156424-181565... 27 6.3
09_02_0025 + 3088084-3088319,3089582-3089627,3089720-3090475 27 6.3
03_05_0567 - 25672780-25672965,25673043-25673135,25673237-256732... 27 6.3
02_05_0415 + 28787353-28787496,28787658-28788204,28788297-287883... 27 6.3
05_03_0190 + 9485701-9485806,9487182-9487368,9489662-9489733,949... 27 8.3
>11_01_0236 +
1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 33.1 bits (72), Expect = 0.13
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Frame = +1
Query: 223 APPVTPDKSE-----DSEIKDDLEEYMEYHRYLKEV--VQALESDPDFRERLEKADEED 378
A V PDKSE D E ++ EE +EY +E+ + +E D D E +E+ DEE+
Sbjct: 419 ANSVEPDKSEECLEFDDEEEEVEEEEIEYEEIEEEIEEEEEVEEDEDVVEEVEEVDEEE 477
>11_01_0791 + 6627961-6630702
Length = 913
Score = 30.3 bits (65), Expect = 0.89
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 175 LLVTIGCMIVFLHCSYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALES 333
+ V+ C I+ L P+ P + E SE K+DL M H KE+ + E+
Sbjct: 226 ITVSQTCTILSLLRQLVSPLIPMEQESSESKEDLINKMGVHELTKELNRRTEN 278
>06_03_1511 - 30669292-30669401,30669894-30669930,30670012-30670107,
30670186-30670281,30670679-30670828,30670956-30671100,
30671178-30671251,30671325-30671445,30671697-30671821,
30671898-30672047,30672249-30672324,30672496-30672557,
30672597-30672839,30673354-30673683,30673776-30673932,
30674008-30674139,30674219-30674277,30674734-30674798,
30674878-30675094,30675413-30675499,30675655-30675750,
30675938-30676003,30676096-30676287,30676380-30676532,
30676812-30677052,30677322-30677515,30678212-30678348,
30678474-30678480,30678708-30678830,30679370-30679427,
30680018-30680090,30680493-30681765
Length = 1714
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 422 WLTKSSCSAIFPDLTSSSSAFSNRSLKSGSLSNAC 318
WLT C+ +FPD +S S S GS+ NAC
Sbjct: 1373 WLTHCHCT-LFPDGNNSDSLLSALLKIRGSMDNAC 1406
>11_04_0450 -
17847676-17847841,17848024-17848131,17848223-17848377,
17848471-17848560,17848650-17848748,17848862-17848928,
17849028-17849124,17849357-17849492,17849579-17849634,
17849718-17849801,17849909-17850125
Length = 424
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +1
Query: 241 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVN 420
D S+ SE++ LEEY+ L LES +FR R DEE S E L ++
Sbjct: 76 DVSDVSELQHALEEYLPVVLGLTMKESRLESSVEFRWRTLDDDEECCLSSAWYEVLSVIH 135
>06_02_0345 +
14833838-14833997,14834095-14834552,14834633-14834870,
14834974-14835431,14836554-14836955
Length = 571
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 229 PVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDP-DFRERLEKADEED 378
P P +S++ ++DLE+Y Y+ + SD D E LE D ED
Sbjct: 494 PPPPTESDEERFREDLEQYYN-DGYVSTPCPSPPSDLFDCEENLEDGDVED 543
>03_05_0625 - 26225201-26225879,26226706-26227553
Length = 508
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = +1
Query: 214 CSYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGK 393
C PP + S E + L+E+ E+ L+ + S + ER E ++
Sbjct: 192 CCLPPPGSGTSSSSGEERVLLDEFSEWPPSLQTLDVYSSSTGRWEERTFHRQGEAARTTI 251
Query: 394 IAEQLDFVNHKCE 432
++DF HKC+
Sbjct: 252 ADMRMDFSGHKCK 264
>12_01_0610 + 5030130-5030247,5030957-5033193
Length = 784
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +1
Query: 196 MIVFLHCSYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQ 321
++V HCS +PP PD EY Y RY K VVQ
Sbjct: 281 VLVMTHCSSSPPEGPDGYP--------LEYDSYARYCKNVVQ 314
>11_01_0219 -
1710206-1710246,1710479-1710620,1710699-1710752,
1710838-1710909,1711631-1711699,1711807-1711848,
1711946-1712014,1712130-1712267,1712390-1712500,
1712576-1712726,1713720-1713775,1714076-1714753
Length = 540
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 217 SYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDV 381
S PP T KS D+E K + EE E L+E+ D D E E+ ++E++
Sbjct: 104 SQPPPRTESKSADAEEKSEEEEDGEGDEELEEL-----DDVDDEEESEEEEKEEL 153
>08_02_0316 +
15690452-15690555,15690871-15690965,15693707-15693783,
15693854-15693908,15695158-15695227,15695388-15695457,
15696047-15696340
Length = 254
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 235 TPDKSEDSEIKDDLEEYMEYHRYLKEVVQ 321
TPD E E+K+ L ME R L E V+
Sbjct: 129 TPDLKESQELKEALRAQMEVQRKLHEQVE 157
>02_04_0209 -
20942021-20942181,20942354-20942420,20942651-20942743,
20943026-20943119,20943690-20943762,20943865-20943973,
20944564-20944663,20945389-20945487,20945571-20945641,
20946067-20946144,20946317-20946403,20946538-20946636
Length = 376
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 63 GQQNSTYSKIIQSISNENCHYLHVDLVVLAKLTHQYEALS--YNRLYD 200
G+ + Y+K I+ I +E+ Y+H D + H +E LS YN++ D
Sbjct: 93 GRLHDRYAKSIEPILSEDIRYVHFDFHRICGHIH-FERLSQLYNQIED 139
>12_01_0633 -
5241098-5241283,5241361-5241453,5241555-5241615,
5241703-5241813,5241960-5242145,5242229-5242590,
5242730-5243152,5243159-5244382,5244468-5244707
Length = 961
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 226 PPVTPDKSEDSEIKDDLEEY 285
P V PD S DS++ D+ EEY
Sbjct: 28 PTVPPDGSSDSDVGDEDEEY 47
>12_01_0220 -
1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 27.5 bits (58), Expect = 6.3
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 217 SYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSG 390
S PP T KS D+E K + EE E +E+ + + D + E+ +EE+ K G
Sbjct: 104 SQPPPRTESKSADAEEKSE-EEDEEDGEGDEELEELDDVDDEEESEEEEEEEEEDKEG 160
>10_08_0731 + 20161962-20163628,20163721-20163862,20164181-20164490,
20164566-20166466,20166557-20166650,20166953-20167440,
20167919-20168599,20168870-20168944,20170148-20170210,
20170588-20170633,20171373-20171420,20171484-20171557
Length = 1862
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 319 QALESDPDFRERLEKADEEDVKSGK 393
QA+E+D +F R+ DEED S K
Sbjct: 1674 QAMEADKEFYSRIRIPDEEDSSSQK 1698
>10_08_0472 -
18154797-18155048,18155332-18156318,18156424-18156546,
18156654-18156808,18157611-18157824,18158977-18159077,
18159162-18159285,18159584-18159655,18159897-18159961,
18160167-18160233,18160917-18161015,18161099-18161167,
18161286-18161409,18162507-18162566,18163111-18163634
Length = 1011
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +1
Query: 223 APPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDV 381
A P T D + + E+ + E EY E ++ D + RE+L K+ ++++
Sbjct: 649 AEPQTSDATSEPEVSES-EGDDEYEWEQLETLRKTRPDKELREKLAKSSQKEI 700
>09_02_0025 + 3088084-3088319,3089582-3089627,3089720-3090475
Length = 345
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/57 (21%), Positives = 31/57 (54%)
Frame = +1
Query: 268 DDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHKCEDK 438
++L++ ++H YL+++ ++ + D+ + + DEED+ I + C++K
Sbjct: 197 NELKKQPKWHAYLEQLDKSNKRKADYNDVIPLDDEEDIPR-PIGAKASKAQRSCKEK 252
>03_05_0567 -
25672780-25672965,25673043-25673135,25673237-25673297,
25673385-25673495,25673640-25673825,25673909-25675287,
25675393-25675776,25675813-25676061,25676147-25676386
Length = 962
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 226 PPVTPDKSEDSEIKDDLEEY 285
P V PD S DS++ D+ EEY
Sbjct: 28 PTVPPDGSSDSDVGDEDEEY 47
>02_05_0415 +
28787353-28787496,28787658-28788204,28788297-28788392,
28788532-28788645,28788929-28789962,28790053-28790124
Length = 668
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 223 APPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEED 378
A T +S S++ DLE+ +E + V+ E DP EK DEE+
Sbjct: 191 ATKTTTRRSARSKVMVDLEQEVEDMAVALQEVKVQEEDPKDVASDEKCDEEE 242
>05_03_0190 +
9485701-9485806,9487182-9487368,9489662-9489733,
9490089-9490160,9490514-9490585,9490845-9490916,
9491355-9491426,9491503-9491577,9492008-9492073,
9492144-9492188,9492276-9492340,9492429-9492811,
9492878-9493076,9493150-9493308,9493386-9493504,
9493652-9493862,9493993-9494224,9494307-9494457,
9494550-9494870
Length = 892
Score = 27.1 bits (57), Expect = 8.3
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +3
Query: 54 IITGQQNSTYSKIIQSISN---ENCHYL-HVDLVVLAKLTH-QYEALSYNRLYDRFPS 212
I+ G + + + S+SN NC ++ LV +K + Y SYN+L RFPS
Sbjct: 199 IVNGSSSLAFISNLTSLSNMILRNCRISGNLGLVDFSKFANLTYLDFSYNQLSGRFPS 256
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,831,391
Number of Sequences: 37544
Number of extensions: 184595
Number of successful extensions: 685
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1035514020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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