Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14f23
(495 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical pr... 56 1e-08
Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin ... 56 1e-08
Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical pr... 33 0.086
Z73911-8|CAL64005.1| 367|Caenorhabditis elegans Hypothetical pr... 31 0.61
Z73911-7|CAA98142.2| 483|Caenorhabditis elegans Hypothetical pr... 31 0.61
AL132904-25|CAB81956.2| 434|Caenorhabditis elegans Hypothetical... 30 0.80
Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical p... 29 2.4
Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical p... 28 3.2
AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome re... 28 4.3
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 27 5.7
X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic int... 27 5.7
U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate fi... 27 5.7
U28991-10|AAK68306.2| 487|Caenorhabditis elegans Hypothetical p... 27 7.5
U28991-9|AAU05576.1| 484|Caenorhabditis elegans Hypothetical pr... 27 7.5
U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr... 27 9.9
U41022-2|AAA82339.2| 373|Caenorhabditis elegans Hypothetical pr... 27 9.9
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 27 9.9
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF016688-1|AAB66077.3| 700|Caenorhabditis elegans Hypothetical ... 27 9.9
AC024801-7|AAK95892.2| 606|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical
protein F44A6.1b protein.
Length = 467
Score = 56.4 bits (130), Expect = 1e-08
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +1
Query: 292 YHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHKCEDKV 441
Y +YL+EVV+ LESDP F ERL+ EED+K+G IA+ +D + + DK+
Sbjct: 71 YTKYLEEVVKILESDPKFNERLKNMKEEDIKAGNIADHIDDLPQEVFDKL 120
>Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical
protein F44A6.1a protein.
Length = 453
Score = 56.4 bits (130), Expect = 1e-08
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +1
Query: 292 YHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHKCEDKV 441
Y +YL+EVV+ LESDP F ERL+ EED+K+G IA+ +D + + DK+
Sbjct: 71 YTKYLEEVVKILESDPKFNERLKNMKEEDIKAGNIADHIDDLPQEVFDKL 120
>AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin
protein.
Length = 456
Score = 56.4 bits (130), Expect = 1e-08
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +1
Query: 292 YHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHKCEDKV 441
Y +YL+EVV+ LESDP F ERL+ EED+K+G IA+ +D + + DK+
Sbjct: 74 YTKYLEEVVKILESDPKFNERLKNMKEEDIKAGNIADHIDDLPQEVFDKL 123
>Z81132-6|CAB03437.1| 315|Caenorhabditis elegans Hypothetical
protein T26E4.8 protein.
Length = 315
Score = 33.5 bits (73), Expect = 0.086
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -1
Query: 135 LHVSNDSFRLILIVLFLNRCCFVAQL*YTIFQFH 34
LH++N+ F L+L++LF N CF+ ++ FH
Sbjct: 195 LHITNEEFLLLLVLLFSNPGCFLEAGIQSLLNFH 228
>Z73911-8|CAL64005.1| 367|Caenorhabditis elegans Hypothetical
protein T12A7.2b protein.
Length = 367
Score = 30.7 bits (66), Expect = 0.61
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 59 NWATKQHLFKNNTINIKRKLSLLTCRFSRPCKINSSI*G 175
NW + +F+ N+ + + L C F RPC I I G
Sbjct: 126 NWVGEHCIFRCNSGVVNKTSGLCECLFGRPCTIQKCING 164
>Z73911-7|CAA98142.2| 483|Caenorhabditis elegans Hypothetical
protein T12A7.2a protein.
Length = 483
Score = 30.7 bits (66), Expect = 0.61
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 59 NWATKQHLFKNNTINIKRKLSLLTCRFSRPCKINSSI*G 175
NW + +F+ N+ + + L C F RPC I I G
Sbjct: 126 NWVGEHCIFRCNSGVVNKTSGLCECLFGRPCTIQKCING 164
>AL132904-25|CAB81956.2| 434|Caenorhabditis elegans Hypothetical
protein Y111B2A.5a protein.
Length = 434
Score = 30.3 bits (65), Expect = 0.80
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Frame = +1
Query: 271 DLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHKCE------ 432
++E+ +E +K + +A E ++LEKA++E + + EQ F+N K E
Sbjct: 304 EMEDQLEAK--VKALKEAKEESSKLEKKLEKAEKERIALEVLEEQNRFLNEKLEKLMEKE 361
Query: 433 --DKVG*NQATRTREITTLS 486
D+ G +QAT + +++S
Sbjct: 362 NSDQTGASQATAELQNSSIS 381
>Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical
protein ZK1098.1 protein.
Length = 724
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 265 KDDLEEYMEYHRYLKEVVQALESDPDF-RERLEKADEEDVKSGKIAEQLDFVNHKCEDKV 441
K+DLE++++ H +KE ++ ++ F +E L A ++ + + +DFV + ++K
Sbjct: 299 KEDLEKFLQEHPKMKESLKYQKASDIFSKEPLWIAVNDEDRKEIFRDCIDFVARRDKEK- 357
Query: 442 G*NQATRTREITTLSY 489
+ R R+I S+
Sbjct: 358 --KEEDRKRDIAAFSH 371
>Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical
protein Y57G11C.20 protein.
Length = 649
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 244 KSEDSE--IKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKS 387
K+ED E + + E++E HR + +ALE + R + E D+ED ++
Sbjct: 335 KNEDRERATQKERREHLERHRQAEARAKALEKEKHERLQQEAKDKEDERA 384
>Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +1
Query: 319 QALESDPDFRERLEKAD--EEDVKSGKIAEQLDF 414
Q L+S P E+LE A E+D+KS K+AE+LDF
Sbjct: 459 QILKS-PSKEEQLEIATVTEQDLKSLKLAEKLDF 491
>Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +1
Query: 319 QALESDPDFRERLEKAD--EEDVKSGKIAEQLDF 414
Q L+S P E+LE A E+D+KS K+AE+LDF
Sbjct: 459 QILKS-PSKEEQLEIATVTEQDLKSLKLAEKLDF 491
>AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 1 protein.
Length = 981
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 202 VFLHCSYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEV 315
V L+ P+TPD I+ L+ Y++++RYL+ V
Sbjct: 216 VCLYLLSCAPLTPDPDNIILIRTALQLYLKFNRYLEAV 253
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 27.5 bits (58), Expect = 5.7
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +1
Query: 202 VFLHCSYAPPVTPDKSEDSEIKDDLEEYMEYHRY--LKEVVQALESDPDFRERLEKADEE 375
V H AP P ++ D EIK +++ MEY R ++E + E E +K +EE
Sbjct: 394 VIEHSQSAPNYFPHRTRD-EIKREVQ--MEYERRWRIEEEERLEEIRRKKEEERKKKEEE 450
Query: 376 DVKSGKIAEQLDFVNHKCEDK 438
D K K E K E+K
Sbjct: 451 DEKRRKAEESERVRKLKEEEK 471
>X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 575
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 235 TPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESD 336
T +K E SE+ D L Y+E R+L+ + +E D
Sbjct: 68 TREKKEMSELNDRLASYIEKVRFLEAQNRKMEKD 101
>U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate
filament, a protein 4 protein.
Length = 558
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 235 TPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESD 336
T +K E SE+ D L Y+E R+L+ + +E D
Sbjct: 49 TREKKEMSELNDRLASYIEKVRFLEAQNRKMEKD 82
>U28991-10|AAK68306.2| 487|Caenorhabditis elegans Hypothetical
protein F08F8.10a protein.
Length = 487
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +3
Query: 66 QQNSTYSKIIQSISNE 113
QQ+STYS I+QSIS++
Sbjct: 240 QQSSTYSPIVQSISSQ 255
>U28991-9|AAU05576.1| 484|Caenorhabditis elegans Hypothetical
protein F08F8.10b protein.
Length = 484
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +3
Query: 66 QQNSTYSKIIQSISNE 113
QQ+STYS I+QSIS++
Sbjct: 237 QQSSTYSPIVQSISSQ 252
>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical
protein M03A8.2 protein.
Length = 2275
Score = 26.6 bits (56), Expect = 9.9
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Frame = +1
Query: 193 CMIVFLHCSYAPPVTPDKSEDSE--IKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKA 366
C +V H +TP+ + ++ I+ L +Y E LESDP+F+ L +
Sbjct: 582 CRVVATHFDMLEYLTPESAPENSTPIRIGLLDYSEQEN--------LESDPNFKMVLSTS 633
Query: 367 DEE------DVKSGKIAEQLDF 414
E+ D+ G + +LDF
Sbjct: 634 SEQKGLTKVDILLGAVKTELDF 655
>U41022-2|AAA82339.2| 373|Caenorhabditis elegans Hypothetical
protein K08B5.1 protein.
Length = 373
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 169 MRLLVTIGCMIVFLHCSYAPPVTPDKSEDSEIKDD-LEEYMEYHRY 303
M ++ + C++VFL S TP+ +ED+ + L E +EY Y
Sbjct: 245 MAPVIIVICLMVFLAESILLLATPEYNEDTVVTHQVLNEVIEYSFY 290
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical
protein T23F2.2b protein.
Length = 1538
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 262 IKDDLEEYMEYHRYLKEVVQALESDPD-FRERLEKADEEDVK 384
+K+++E + K ++ LE D + FR+ LEKAD++ +K
Sbjct: 485 MKNEIESLRQTFSDAKIRIRELEEDANIFRKDLEKADDDRLK 526
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical
protein T23F2.2a protein.
Length = 1534
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 262 IKDDLEEYMEYHRYLKEVVQALESDPD-FRERLEKADEEDVK 384
+K+++E + K ++ LE D + FR+ LEKAD++ +K
Sbjct: 485 MKNEIESLRQTFSDAKIRIRELEEDANIFRKDLEKADDDRLK 526
>AF016688-1|AAB66077.3| 700|Caenorhabditis elegans Hypothetical
protein F18A12.5 protein.
Length = 700
Score = 26.6 bits (56), Expect = 9.9
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +1
Query: 244 KSEDSEIKDDLEEYMEYHRYLKEVVQ 321
+ + E+ DDL++Y ++ +LKE Q
Sbjct: 241 QQDRKELSDDLKDYSDFKNHLKEFYQ 266
>AC024801-7|AAK95892.2| 606|Caenorhabditis elegans Hypothetical
protein Y50D7A.2 protein.
Length = 606
Score = 26.6 bits (56), Expect = 9.9
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Frame = +1
Query: 154 N*LINMRLLVTIGCMIVFLHCSYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALES 333
N ++ M LV G ++ F Y V E I +E M+Y E ALE+
Sbjct: 367 NLVLEMASLVPDGMVVFFTSYLYMENVIGVWYEQHII----DELMKYKLLFIETNDALET 422
Query: 334 DPDFRERLEKADEE------DVKSGKIAEQLDFVNH 423
+ +E D V GK++E +DF +H
Sbjct: 423 SAALEKYVEACDSGRGAVLFSVARGKVSEGIDFSHH 458
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,790,765
Number of Sequences: 27780
Number of extensions: 178528
Number of successful extensions: 880
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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