Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14f21
         (291 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U12202-2|AAB08007.1|  130|Homo sapiens ribosomal protein S24 pro...   134   6e-32
U12202-1|AAB08006.1|  133|Homo sapiens ribosomal protein S24 pro...   134   6e-32
M31520-2|AAA36588.1|  133|Homo sapiens ribosomal protein S24 pro...   134   6e-32
BX537975-1|CAD97939.1|  132|Homo sapiens hypothetical protein pr...   134   6e-32
BC071926-1|AAH71926.1|  130|Homo sapiens ribosomal protein S24 p...   134   6e-32
BC000523-1|AAH00523.1|  130|Homo sapiens ribosomal protein S24 p...   134   6e-32
AL512628-3|CAI16468.1|  133|Homo sapiens ribosomal protein S24 p...   134   6e-32
AL512628-2|CAI16467.1|  130|Homo sapiens ribosomal protein S24 p...   134   6e-32
BC126410-1|AAI26411.1|  516|Homo sapiens leucine rich repeat tra...    30   1.2  
BC126408-1|AAI26409.1|  516|Homo sapiens leucine rich repeat tra...    30   1.2  
AY182026-1|AAO67547.1|  516|Homo sapiens leucine-rich repeat tra...    30   1.2  
AB007876-1|BAA24846.2|  529|Homo sapiens KIAA0416 protein.             30   1.2  
BC047905-1|AAH47905.2|  915|Homo sapiens leucine-rich repeat-con...    27   8.3  
AL356953-4|CAI15930.1|  828|Homo sapiens leucine-rich repeat-con...    27   8.3  
AL356953-3|CAI15929.1|  915|Homo sapiens leucine-rich repeat-con...    27   8.3  
AL356953-1|CAI15927.1|  967|Homo sapiens leucine-rich repeat-con...    27   8.3  
AF190501-1|AAG17168.1|  828|Homo sapiens leucine-rich repeat-con...    27   8.3  
AB083616-1|BAB89329.1|  423|Homo sapiens putative G-protein coup...    27   8.3  

>U12202-2|AAB08007.1|  130|Homo sapiens ribosomal protein S24
           protein.
          Length = 130

 Score =  134 bits (323), Expect = 6e-32
 Identities = 61/73 (83%), Positives = 66/73 (90%)
 Frame = +2

Query: 71  TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 250
           T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4   TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63

Query: 251 FGGGKSTGFALIY 289
           FGGGK+TGF +IY
Sbjct: 64  FGGGKTTGFGMIY 76


>U12202-1|AAB08006.1|  133|Homo sapiens ribosomal protein S24
           protein.
          Length = 133

 Score =  134 bits (323), Expect = 6e-32
 Identities = 61/73 (83%), Positives = 66/73 (90%)
 Frame = +2

Query: 71  TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 250
           T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4   TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63

Query: 251 FGGGKSTGFALIY 289
           FGGGK+TGF +IY
Sbjct: 64  FGGGKTTGFGMIY 76


>M31520-2|AAA36588.1|  133|Homo sapiens ribosomal protein S24
           protein.
          Length = 133

 Score =  134 bits (323), Expect = 6e-32
 Identities = 61/73 (83%), Positives = 66/73 (90%)
 Frame = +2

Query: 71  TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 250
           T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4   TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63

Query: 251 FGGGKSTGFALIY 289
           FGGGK+TGF +IY
Sbjct: 64  FGGGKTTGFGMIY 76


>BX537975-1|CAD97939.1|  132|Homo sapiens hypothetical protein
           protein.
          Length = 132

 Score =  134 bits (323), Expect = 6e-32
 Identities = 61/73 (83%), Positives = 66/73 (90%)
 Frame = +2

Query: 71  TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 250
           T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4   TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63

Query: 251 FGGGKSTGFALIY 289
           FGGGK+TGF +IY
Sbjct: 64  FGGGKTTGFGMIY 76


>BC071926-1|AAH71926.1|  130|Homo sapiens ribosomal protein S24
           protein.
          Length = 130

 Score =  134 bits (323), Expect = 6e-32
 Identities = 61/73 (83%), Positives = 66/73 (90%)
 Frame = +2

Query: 71  TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 250
           T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4   TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63

Query: 251 FGGGKSTGFALIY 289
           FGGGK+TGF +IY
Sbjct: 64  FGGGKTTGFGMIY 76


>BC000523-1|AAH00523.1|  130|Homo sapiens ribosomal protein S24
           protein.
          Length = 130

 Score =  134 bits (323), Expect = 6e-32
 Identities = 61/73 (83%), Positives = 66/73 (90%)
 Frame = +2

Query: 71  TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 250
           T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4   TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63

Query: 251 FGGGKSTGFALIY 289
           FGGGK+TGF +IY
Sbjct: 64  FGGGKTTGFGMIY 76


>AL512628-3|CAI16468.1|  133|Homo sapiens ribosomal protein S24
           protein.
          Length = 133

 Score =  134 bits (323), Expect = 6e-32
 Identities = 61/73 (83%), Positives = 66/73 (90%)
 Frame = +2

Query: 71  TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 250
           T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4   TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63

Query: 251 FGGGKSTGFALIY 289
           FGGGK+TGF +IY
Sbjct: 64  FGGGKTTGFGMIY 76


>AL512628-2|CAI16467.1|  130|Homo sapiens ribosomal protein S24
           protein.
          Length = 130

 Score =  134 bits (323), Expect = 6e-32
 Identities = 61/73 (83%), Positives = 66/73 (90%)
 Frame = +2

Query: 71  TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 250
           T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4   TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63

Query: 251 FGGGKSTGFALIY 289
           FGGGK+TGF +IY
Sbjct: 64  FGGGKTTGFGMIY 76


>BC126410-1|AAI26411.1|  516|Homo sapiens leucine rich repeat
           transmembrane neuronal 2 protein.
          Length = 516

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = -1

Query: 282 KANPVDLPPPKFVLKPNTNTTSGVTLYIL-ASFSRISVLLTVGFPGCKTSQTICLRANNL 106
           K   + L   K    PNT  T  + L  L  SF+++S L    F G +  QT+ LR+N+L
Sbjct: 110 KLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSL 169

Query: 105 LVMNLRV 85
             + +R+
Sbjct: 170 RTIPVRL 176


>BC126408-1|AAI26409.1|  516|Homo sapiens leucine rich repeat
           transmembrane neuronal 2 protein.
          Length = 516

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = -1

Query: 282 KANPVDLPPPKFVLKPNTNTTSGVTLYIL-ASFSRISVLLTVGFPGCKTSQTICLRANNL 106
           K   + L   K    PNT  T  + L  L  SF+++S L    F G +  QT+ LR+N+L
Sbjct: 110 KLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSL 169

Query: 105 LVMNLRV 85
             + +R+
Sbjct: 170 RTIPVRL 176


>AY182026-1|AAO67547.1|  516|Homo sapiens leucine-rich repeat
           transmembrane neuronal 2 protein protein.
          Length = 516

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = -1

Query: 282 KANPVDLPPPKFVLKPNTNTTSGVTLYIL-ASFSRISVLLTVGFPGCKTSQTICLRANNL 106
           K   + L   K    PNT  T  + L  L  SF+++S L    F G +  QT+ LR+N+L
Sbjct: 110 KLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSL 169

Query: 105 LVMNLRV 85
             + +R+
Sbjct: 170 RTIPVRL 176


>AB007876-1|BAA24846.2|  529|Homo sapiens KIAA0416 protein.
          Length = 529

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = -1

Query: 282 KANPVDLPPPKFVLKPNTNTTSGVTLYIL-ASFSRISVLLTVGFPGCKTSQTICLRANNL 106
           K   + L   K    PNT  T  + L  L  SF+++S L    F G +  QT+ LR+N+L
Sbjct: 123 KLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSL 182

Query: 105 LVMNLRV 85
             + +R+
Sbjct: 183 RTIPVRL 189


>BC047905-1|AAH47905.2|  915|Homo sapiens leucine-rich
           repeat-containing G protein-coupled receptor 6 protein.
          Length = 915

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -1

Query: 273 PVDLPPPKFVLK--PNTNTTSGVTLYILASFSRIS 175
           PV LPP KFV+      NT +G++  +LAS   ++
Sbjct: 539 PVPLPPVKFVVGAIAGANTLTGISCGLLASVDALT 573


>AL356953-4|CAI15930.1|  828|Homo sapiens leucine-rich
           repeat-containing G protein-coupled receptor 6 protein.
          Length = 828

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -1

Query: 273 PVDLPPPKFVLK--PNTNTTSGVTLYILASFSRIS 175
           PV LPP KFV+      NT +G++  +LAS   ++
Sbjct: 452 PVPLPPVKFVVGAIAGANTLTGISCGLLASVDALT 486


>AL356953-3|CAI15929.1|  915|Homo sapiens leucine-rich
           repeat-containing G protein-coupled receptor 6 protein.
          Length = 915

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -1

Query: 273 PVDLPPPKFVLK--PNTNTTSGVTLYILASFSRIS 175
           PV LPP KFV+      NT +G++  +LAS   ++
Sbjct: 539 PVPLPPVKFVVGAIAGANTLTGISCGLLASVDALT 573


>AL356953-1|CAI15927.1|  967|Homo sapiens leucine-rich
           repeat-containing G protein-coupled receptor 6 protein.
          Length = 967

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -1

Query: 273 PVDLPPPKFVLK--PNTNTTSGVTLYILASFSRIS 175
           PV LPP KFV+      NT +G++  +LAS   ++
Sbjct: 591 PVPLPPVKFVVGAIAGANTLTGISCGLLASVDALT 625


>AF190501-1|AAG17168.1|  828|Homo sapiens leucine-rich
           repeat-containing G protein-coupled receptor 6 protein.
          Length = 828

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -1

Query: 273 PVDLPPPKFVLK--PNTNTTSGVTLYILASFSRIS 175
           PV LPP KFV+      NT +G++  +LAS   ++
Sbjct: 452 PVPLPPVKFVVGAIAGANTLTGISCGLLASVDALT 486


>AB083616-1|BAB89329.1|  423|Homo sapiens putative G-protein coupled
           receptor protein.
          Length = 423

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -1

Query: 273 PVDLPPPKFVLK--PNTNTTSGVTLYILASFSRIS 175
           PV LPP KFV+      NT +G++  +LAS   ++
Sbjct: 47  PVPLPPVKFVVGAIAGANTLTGISCGLLASVDALT 81


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,037,503
Number of Sequences: 237096
Number of extensions: 772777
Number of successful extensions: 1909
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1909
length of database: 76,859,062
effective HSP length: 73
effective length of database: 59,551,054
effective search space used: 1369674242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)