Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14f21
         (291 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113512-1|AAM29517.1|  131|Drosophila melanogaster RE59324p pro...   142   7e-35
AE013599-3424|AAF46871.1|  131|Drosophila melanogaster CG3751-PA...   142   7e-35
BT025204-1|ABF17895.1|  784|Drosophila melanogaster FI01112p pro...    27   3.9  
BT022122-1|AAY51517.1|  784|Drosophila melanogaster IP09065p pro...    27   3.9  
AJ250955-1|CAB63944.1|  718|Drosophila melanogaster Sox50E prote...    27   3.9  
AE013599-1843|AAF58279.2|  784|Drosophila melanogaster CG8404-PA...    27   3.9  
AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.      27   5.1  
AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse tran...    27   5.1  

>AY113512-1|AAM29517.1|  131|Drosophila melanogaster RE59324p
           protein.
          Length = 131

 Score =  142 bits (344), Expect = 7e-35
 Identities = 67/77 (87%), Positives = 71/77 (92%)
 Frame = +2

Query: 59  MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFG 238
           MS  TATIRTRKFMTNRLLARKQMVCDVLHPG  +V+KTEIREKLA MYKVTPDVVF FG
Sbjct: 1   MSGTTATIRTRKFMTNRLLARKQMVCDVLHPGLSSVNKTEIREKLAAMYKVTPDVVFAFG 60

Query: 239 FKTNFGGGKSTGFALIY 289
           F+TNFGGG+STGFALIY
Sbjct: 61  FRTNFGGGRSTGFALIY 77


>AE013599-3424|AAF46871.1|  131|Drosophila melanogaster CG3751-PA
           protein.
          Length = 131

 Score =  142 bits (344), Expect = 7e-35
 Identities = 67/77 (87%), Positives = 71/77 (92%)
 Frame = +2

Query: 59  MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFG 238
           MS  TATIRTRKFMTNRLLARKQMVCDVLHPG  +V+KTEIREKLA MYKVTPDVVF FG
Sbjct: 1   MSGTTATIRTRKFMTNRLLARKQMVCDVLHPGLSSVNKTEIREKLAAMYKVTPDVVFAFG 60

Query: 239 FKTNFGGGKSTGFALIY 289
           F+TNFGGG+STGFALIY
Sbjct: 61  FRTNFGGGRSTGFALIY 77


>BT025204-1|ABF17895.1|  784|Drosophila melanogaster FI01112p
           protein.
          Length = 784

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 76  DYSHSQIHDQQIVGAQADGLRCLTSRKTNRQQDRDP*EARQN 201
           DYS S +  ++     A G +CL    TN+  D    EA  N
Sbjct: 585 DYSTSAVEHKETTSDSASGQKCLKYPDTNQNYDDYEAEAYSN 626


>BT022122-1|AAY51517.1|  784|Drosophila melanogaster IP09065p
           protein.
          Length = 784

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 76  DYSHSQIHDQQIVGAQADGLRCLTSRKTNRQQDRDP*EARQN 201
           DYS S +  ++     A G +CL    TN+  D    EA  N
Sbjct: 585 DYSTSAVEHKETTSDSASGQKCLKYPDTNQNYDDYEAEAYSN 626


>AJ250955-1|CAB63944.1|  718|Drosophila melanogaster Sox50E protein
           protein.
          Length = 718

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 76  DYSHSQIHDQQIVGAQADGLRCLTSRKTNRQQDRDP*EARQN 201
           DYS S +  ++     A G +CL    TN+  D    EA  N
Sbjct: 585 DYSTSAVEHKETTSDSASGQKCLKYPDTNQNYDDYEAEAYSN 626


>AE013599-1843|AAF58279.2|  784|Drosophila melanogaster CG8404-PA
           protein.
          Length = 784

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 76  DYSHSQIHDQQIVGAQADGLRCLTSRKTNRQQDRDP*EARQN 201
           DYS S +  ++     A G +CL    TN+  D    EA  N
Sbjct: 585 DYSTSAVEHKETTSDSASGQKCLKYPDTNQNYDDYEAEAYSN 626


>AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.
          Length = 884

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 73  CSFTHXELFSIIRRLHARVS 14
           C  T+ E+FSI++ LH R S
Sbjct: 459 CRVTYPEVFSIVKALHTRKS 478


>AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse
           transcriptase protein.
          Length = 832

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 73  CSFTHXELFSIIRRLHARVS 14
           C  T+ E+FSI++ LH R S
Sbjct: 407 CRVTYPEVFSIVKALHTRKS 426


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,064,871
Number of Sequences: 53049
Number of extensions: 241553
Number of successful extensions: 675
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 485663193
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)