Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14f21
(291 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal pro... 110 1e-25
Z29115-2|CAA82363.1| 91|Caenorhabditis elegans Hypothetical pr... 42 6e-05
Z81036-2|CAD30433.1| 431|Caenorhabditis elegans Hypothetical pr... 26 5.2
Z81036-1|CAB02742.1| 473|Caenorhabditis elegans Hypothetical pr... 26 5.2
U97549-9|AAB52849.2| 472|Caenorhabditis elegans Hypothetical pr... 26 5.2
AF291851-1|AAK55968.1| 103|Caenorhabditis elegans G protein sig... 26 5.2
AF016686-13|AAB66233.1| 470|Caenorhabditis elegans Hypothetical... 26 5.2
Z81513-3|CAB04185.3| 476|Caenorhabditis elegans Hypothetical pr... 25 6.8
U10438-14|ABB88242.1| 441|Caenorhabditis elegans Hypothetical p... 25 6.8
AL033514-24|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical... 25 6.8
AC024817-41|AAY86306.1| 152|Caenorhabditis elegans Hypothetical... 25 6.8
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 25 9.1
U55366-8|AAZ91347.1| 287|Caenorhabditis elegans Serpentine rece... 25 9.1
>AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 24 protein.
Length = 131
Score = 110 bits (265), Expect = 1e-25
Identities = 48/71 (67%), Positives = 59/71 (83%)
Frame = +2
Query: 77 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 256
TIRTRK +TN+LL RKQMV +V+HPG+PTV K +IREK+AK+YK TPD V FGF++ G
Sbjct: 6 TIRTRKVLTNKLLYRKQMVVEVIHPGRPTVPKADIREKIAKLYKTTPDTVIPFGFESKIG 65
Query: 257 GGKSTGFALIY 289
GGKS GFAL+Y
Sbjct: 66 GGKSKGFALVY 76
>Z29115-2|CAA82363.1| 91|Caenorhabditis elegans Hypothetical
protein T26G10.3 protein.
Length = 91
Score = 42.3 bits (95), Expect = 6e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2
Query: 128 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVV 226
MV +V+ PG+PT K +IREK+A Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>Z81036-2|CAD30433.1| 431|Caenorhabditis elegans Hypothetical
protein C16C2.2b protein.
Length = 431
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 193 RQNVQGYSRCSVRIRFQDKLRRW 261
RQN QGY R+RF K + W
Sbjct: 201 RQNAQGYRCLMDRLRFAIKTKPW 223
>Z81036-1|CAB02742.1| 473|Caenorhabditis elegans Hypothetical
protein C16C2.2a protein.
Length = 473
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 193 RQNVQGYSRCSVRIRFQDKLRRW 261
RQN QGY R+RF K + W
Sbjct: 201 RQNAQGYRCLMDRLRFAIKTKPW 223
>U97549-9|AAB52849.2| 472|Caenorhabditis elegans Hypothetical
protein F15A8.7 protein.
Length = 472
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 74 ATIRTRKFMTNRLLARKQMVCDVLHPG 154
A + T +F+ R+L+ + +V DVL PG
Sbjct: 336 AEVLTPRFLEPRVLSPEALVIDVLSPG 362
>AF291851-1|AAK55968.1| 103|Caenorhabditis elegans G protein
signaling regulator EAT-16 protein.
Length = 103
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 193 RQNVQGYSRCSVRIRFQDKLRRW 261
RQN QGY R+RF K + W
Sbjct: 1 RQNAQGYRCLMDRLRFAIKTKPW 23
>AF016686-13|AAB66233.1| 470|Caenorhabditis elegans Hypothetical
protein R07C3.3 protein.
Length = 470
Score = 25.8 bits (54), Expect = 5.2
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +1
Query: 13 QRHVRVDAELLKIIXNE*RNSDY 81
++H++ D + LK+ N+ +NSDY
Sbjct: 260 KKHLKWDLKSLKLFRNDSKNSDY 282
>Z81513-3|CAB04185.3| 476|Caenorhabditis elegans Hypothetical
protein F26D2.3a protein.
Length = 476
Score = 25.4 bits (53), Expect = 6.8
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 16 RHVRVDAELLKIIXNE*RNSDY 81
+H + D + L++ NE RNSDY
Sbjct: 266 KHSKWDLKSLRLFRNESRNSDY 287
>U10438-14|ABB88242.1| 441|Caenorhabditis elegans Hypothetical
protein B0280.11 protein.
Length = 441
Score = 25.4 bits (53), Expect = 6.8
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 131 VCDVLHPGK-PTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGF 277
+CD GK PTVS I A ++ D +N+G G++ F
Sbjct: 302 ICDFWPDGKIPTVSYGRIAATAASVFDSDIDSDATCAIVSNYGAGRAGSF 351
>AL033514-24|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical
protein Y75B8A.24 protein.
Length = 2121
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 103 QQIVGAQADGLRCLTSRKTNRQQDRD 180
QQIV AQAD L C S + +D++
Sbjct: 143 QQIVSAQADALACAVSSIYDVLEDQE 168
>AC024817-41|AAY86306.1| 152|Caenorhabditis elegans Hypothetical
protein Y54G2A.50 protein.
Length = 152
Score = 25.4 bits (53), Expect = 6.8
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2
Query: 221 VVFVFGFKTNFGGGK 265
+VF+FGF+ FG G+
Sbjct: 115 IVFIFGFERRFGDGR 129
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 25.0 bits (52), Expect = 9.1
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 128 SACAPTICWS*IC 90
SAC P+ CW+ IC
Sbjct: 361 SACTPSPCWNGIC 373
>U55366-8|AAZ91347.1| 287|Caenorhabditis elegans Serpentine
receptor, class x protein73 protein.
Length = 287
Score = 25.0 bits (52), Expect = 9.1
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = -1
Query: 144 KTS-QTICL-RA-NNLLVMNLRVRIVAVPSLIXNY 49
KTS ICL RA NN++V+ ++ PSL+ +Y
Sbjct: 4 KTSFNVICLTRAVNNIIVLVFNFLVITFPSLLLSY 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,633,653
Number of Sequences: 27780
Number of extensions: 120550
Number of successful extensions: 388
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 280685548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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