Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14f19
(413 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC043409-1|AAH43409.1| 422|Homo sapiens KCNH5 protein protein. 31 2.0
BC048287-1|AAH48287.1| 760|Homo sapiens SEC63 homolog (S. cerev... 30 2.6
BC047221-1|AAH47221.1| 760|Homo sapiens SEC63 homolog (S. cerev... 30 2.6
AL024507-3|CAI19745.1| 760|Homo sapiens SEC63 homolog (S. cerev... 30 2.6
AJ011779-1|CAB46275.1| 760|Homo sapiens SEC63 protein protein. 30 2.6
AF100141-1|AAC83375.1| 760|Homo sapiens SEC63 protein. 30 2.6
BC038515-1|AAH38515.1| 796|Homo sapiens CCDC110 protein protein. 29 6.1
BC028419-1|AAH28419.1| 833|Homo sapiens coiled-coil domain cont... 29 6.1
AK097605-1|BAC05116.1| 596|Homo sapiens protein ( Homo sapiens ... 29 6.1
AB080722-1|BAC81776.1| 833|Homo sapiens hypothetical protein pr... 29 6.1
M28685-1|AAA52838.1| 52|Homo sapiens IGHV@ protein. 29 8.1
>BC043409-1|AAH43409.1| 422|Homo sapiens KCNH5 protein protein.
Length = 422
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -3
Query: 336 TVGFGNVGTLIIVIKKFILYSILV---HFQMFIVNYC 235
T+GFGN+ V K F + ++V +F FI NYC
Sbjct: 374 TIGFGNIAPTTDVEKMFSVAMMMVGCKYFNFFIENYC 410
>BC048287-1|AAH48287.1| 760|Homo sapiens SEC63 homolog (S.
cerevisiae) protein.
Length = 760
Score = 30.3 bits (65), Expect = 2.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 154 YQSLPAELLRK-RTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSL 2
+Q L + RK R L T +TH + SLYFP ++ W+L + Q+L
Sbjct: 613 WQELQQSIQRKERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTL 663
>BC047221-1|AAH47221.1| 760|Homo sapiens SEC63 homolog (S.
cerevisiae) protein.
Length = 760
Score = 30.3 bits (65), Expect = 2.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 154 YQSLPAELLRK-RTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSL 2
+Q L + RK R L T +TH + SLYFP ++ W+L + Q+L
Sbjct: 613 WQELQQSIQRKERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTL 663
>AL024507-3|CAI19745.1| 760|Homo sapiens SEC63 homolog (S.
cerevisiae protein.
Length = 760
Score = 30.3 bits (65), Expect = 2.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 154 YQSLPAELLRK-RTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSL 2
+Q L + RK R L T +TH + SLYFP ++ W+L + Q+L
Sbjct: 613 WQELQQSIQRKERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTL 663
>AJ011779-1|CAB46275.1| 760|Homo sapiens SEC63 protein protein.
Length = 760
Score = 30.3 bits (65), Expect = 2.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 154 YQSLPAELLRK-RTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSL 2
+Q L + RK R L T +TH + SLYFP ++ W+L + Q+L
Sbjct: 613 WQELQQSIQRKERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTL 663
>AF100141-1|AAC83375.1| 760|Homo sapiens SEC63 protein.
Length = 760
Score = 30.3 bits (65), Expect = 2.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 154 YQSLPAELLRK-RTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSL 2
+Q L + RK R L T +TH + SLYFP ++ W+L + Q+L
Sbjct: 613 WQELQQSIQRKERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTL 663
>BC038515-1|AAH38515.1| 796|Homo sapiens CCDC110 protein protein.
Length = 796
Score = 29.1 bits (62), Expect = 6.1
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 10 DNEQRNMIRTSSHVLNVQENIMTSNCASSPYSCEATS 120
++E +++ ++S +LN E + S C+ + Y C A S
Sbjct: 10 EDEVDSVLLSASKILNSSEGVKESGCSDTEYGCIAES 46
>BC028419-1|AAH28419.1| 833|Homo sapiens coiled-coil domain
containing 110 protein.
Length = 833
Score = 29.1 bits (62), Expect = 6.1
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 10 DNEQRNMIRTSSHVLNVQENIMTSNCASSPYSCEATS 120
++E +++ ++S +LN E + S C+ + Y C A S
Sbjct: 10 EDEVDSVLLSASKILNSSEGVKESGCSDTEYGCIAES 46
>AK097605-1|BAC05116.1| 596|Homo sapiens protein ( Homo sapiens
cDNA FLJ40286 fis, clone TESTI2027840. ).
Length = 596
Score = 29.1 bits (62), Expect = 6.1
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 10 DNEQRNMIRTSSHVLNVQENIMTSNCASSPYSCEATS 120
++E +++ ++S +LN E + S C+ + Y C A S
Sbjct: 10 EDEVDSVLLSASKILNSSEGVKESGCSDTEYGCIAES 46
>AB080722-1|BAC81776.1| 833|Homo sapiens hypothetical protein
protein.
Length = 833
Score = 29.1 bits (62), Expect = 6.1
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 10 DNEQRNMIRTSSHVLNVQENIMTSNCASSPYSCEATS 120
++E +++ ++S +LN E + S C+ + Y C A S
Sbjct: 10 EDEVDSVLLSASKILNSSEGVKESGCSDTEYGCIAES 46
>M28685-1|AAA52838.1| 52|Homo sapiens IGHV@ protein.
Length = 52
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 372 KMVTARTVVIGKTVGFGNVGTLIIVI 295
K +T VVIG+ G G+ GT+I+V+
Sbjct: 10 KTITMIVVVIGRWAGTGDRGTMIVVV 35
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,425,584
Number of Sequences: 237096
Number of extensions: 1274880
Number of successful extensions: 3549
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3549
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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