Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14f16
         (448 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   3.7  
AY752907-1|AAV30081.1|   97|Anopheles gambiae peroxidase 13A pro...    22   8.6  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   8.6  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    22   8.6  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 3.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -3

Query: 167 YLLPLGHGACSNRSYCVLFATVVQKKVA 84
           Y  P+ HGA +NR  C      VQ+K A
Sbjct: 804 YAAPVWHGALTNRE-CRSLLKRVQRKAA 830


>AY752907-1|AAV30081.1|   97|Anopheles gambiae peroxidase 13A
           protein.
          Length = 97

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = +1

Query: 178 PKYFKLTPTTLYNNNMSILNVVEACDLAHTFL 273
           P +  + P  +YN++MS   ++ +  +  TF+
Sbjct: 58  PAFLTMLPPDMYNDSMSAEILLSSPAMQQTFI 89


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 325  NLKLLRRKTNIKEVAVMLNKKTTECLQLKQKI 420
            +LKL R   ++KEV      + T+ +Q K+K+
Sbjct: 1427 SLKLRRGAKDLKEVENEYPVRRTDSIQSKRKV 1458


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 22.2 bits (45), Expect = 8.6
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 164 NRRINPNTSNLPQLLFIITT*AF 232
           NRR+N     +PQ++F++   A+
Sbjct: 549 NRRVNILLEFIPQMMFLVLLFAY 571


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,364
Number of Sequences: 2352
Number of extensions: 8150
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37843779
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)