BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14f16
(448 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC127118-1|AAI27119.1| 1524|Homo sapiens SAMD9L protein protein. 32 1.0
BC038974-1|AAH38974.1| 522|Homo sapiens SAMD9L protein protein. 32 1.0
BC029108-1|AAH29108.1| 692|Homo sapiens SAMD9L protein protein. 32 1.0
AL834232-1|CAD38910.1| 499|Homo sapiens hypothetical protein pr... 32 1.0
AK097204-1|BAC04975.1| 695|Homo sapiens protein ( Homo sapiens ... 32 1.0
AF474973-1|AAQ05771.1| 1584|Homo sapiens UEF1 protein. 32 1.0
AB095926-1|BAC23102.1| 1587|Homo sapiens KIAA2005 protein protein. 32 1.0
>BC127118-1|AAI27119.1| 1524|Homo sapiens SAMD9L protein protein.
Length = 1524
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 KTCLDIALDNLKLLRRKTNIKEVA-VMLNKKTTECLQ 405
K C D +D + LL+ + KE+A +ML+KK + C +
Sbjct: 1265 KRCFDFFIDYMVLLKMRYTQKEIAEIMLSKKVSRCFR 1301
>BC038974-1|AAH38974.1| 522|Homo sapiens SAMD9L protein protein.
Length = 522
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 KTCLDIALDNLKLLRRKTNIKEVA-VMLNKKTTECLQ 405
K C D +D + LL+ + KE+A +ML+KK + C +
Sbjct: 376 KRCFDFFIDYMVLLKMRYTQKEIAEIMLSKKVSRCFR 412
>BC029108-1|AAH29108.1| 692|Homo sapiens SAMD9L protein protein.
Length = 692
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 KTCLDIALDNLKLLRRKTNIKEVA-VMLNKKTTECLQ 405
K C D +D + LL+ + KE+A +ML+KK + C +
Sbjct: 439 KRCFDFFIDYMVLLKMRYTQKEIAEIMLSKKVSRCFR 475
>AL834232-1|CAD38910.1| 499|Homo sapiens hypothetical protein
protein.
Length = 499
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 KTCLDIALDNLKLLRRKTNIKEVA-VMLNKKTTECLQ 405
K C D +D + LL+ + KE+A +ML+KK + C +
Sbjct: 180 KRCFDFFIDYMVLLKMRYTQKEIAEIMLSKKVSRCFR 216
>AK097204-1|BAC04975.1| 695|Homo sapiens protein ( Homo sapiens
cDNA FLJ39885 fis, clone SPLEN2016356. ).
Length = 695
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 KTCLDIALDNLKLLRRKTNIKEVA-VMLNKKTTECLQ 405
K C D +D + LL+ + KE+A +ML+KK + C +
Sbjct: 376 KRCFDFFIDYMVLLKMRYTQKEIAEIMLSKKVSRCFR 412
>AF474973-1|AAQ05771.1| 1584|Homo sapiens UEF1 protein.
Length = 1584
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 KTCLDIALDNLKLLRRKTNIKEVA-VMLNKKTTECLQ 405
K C D +D + LL+ + KE+A +ML+KK + C +
Sbjct: 1265 KRCFDFFIDYMVLLKMRYTQKEIAEIMLSKKVSRCFR 1301
>AB095926-1|BAC23102.1| 1587|Homo sapiens KIAA2005 protein protein.
Length = 1587
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 298 KTCLDIALDNLKLLRRKTNIKEVA-VMLNKKTTECLQ 405
K C D +D + LL+ + KE+A +ML+KK + C +
Sbjct: 1268 KRCFDFFIDYMVLLKMRYTQKEIAEIMLSKKVSRCFR 1304
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,698,554
Number of Sequences: 237096
Number of extensions: 1152865
Number of successful extensions: 2025
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2025
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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