Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14f14
         (540 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal ...    24   2.8  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   3.7  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   5.0  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   6.5  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   8.7  

>AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal
           carrier protein A5 protein.
          Length = 211

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 382 PDAPENQYSTFRSWKSFRASQTNLPKLRMDSLD 480
           PDAP       RSWK +     N+P   +D+ D
Sbjct: 95  PDAPSRSNPEMRSWKHWLVG--NIPGADVDAGD 125


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
 Frame = +1

Query: 199 PGCFPTENSDGSTSEESVKITRNLTEKRKNYVRRVSSRVAYLDKKPITQKYRHQTSVCS- 375
           PGCF             +K     +++ ++YV+       +L    + QK+R + S  S 
Sbjct: 461 PGCFSLFRGRALMENSVMKKYTTKSDQARHYVQYDQGEDRWLCTLLLKQKFRVEYSAASD 520

Query: 376 ---YKPDAPENQYSTFRSW 423
              + P+     Y+  R W
Sbjct: 521 AYTHAPEGFNEFYNQRRRW 539


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 11/43 (25%), Positives = 24/43 (55%)
 Frame = +3

Query: 180 QHGRE*TRVLPNRELRRQYQRRICQNNQEPNRETQELRPQGLQ 308
           + GR+  +    R+ ++Q+Q+R  Q  Q+  ++ Q+ + Q  Q
Sbjct: 211 RRGRQGPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQQQ 253


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 14/61 (22%), Positives = 26/61 (42%)
 Frame = +1

Query: 322 LDKKPITQKYRHQTSVCSYKPDAPENQYSTFRSWKSFRASQTNLPKLRMDSLDSKCNLTD 501
           LD+    ++++ Q  V   KP  P    S+FR       +     +L +D L+     +D
Sbjct: 464 LDRSCFPEQWKKQRLVLLPKPGKPPGDPSSFRPICLLNNAGKTFERLLLDRLNEHLEDSD 523

Query: 502 S 504
           +
Sbjct: 524 N 524


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 97  SLEELRPIKKEELNRLMNEIYETVTAACNMDE 192
           SLE+++    EEL R++NE    V     ++E
Sbjct: 215 SLEKMKTDSTEELARIVNEANRLVRGLERLNE 246


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.311    0.127    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,119
Number of Sequences: 2352
Number of extensions: 10296
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)