Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14f12
         (342 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosom...    80   6e-16
AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p pro...    80   6e-16
AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA ...    80   6e-16
Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein ( Dros...    78   3e-15
M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...    27   6.4  
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...    27   6.4  
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...    27   6.4  
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...    27   6.4  

>S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosomal
           protein rpA2 protein.
          Length = 112

 Score = 80.2 bits (189), Expect = 6e-16
 Identities = 42/79 (53%), Positives = 44/79 (55%)
 Frame = +3

Query: 3   AAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXX 182
           AA V+VEPYWPGLFAKALEGINV+DLITNIGSGV                          
Sbjct: 34  AANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEK 93

Query: 183 XXXXXXXXSDDDMGFGLFD 239
                   SDDDMGFGLFD
Sbjct: 94  KKEEESDQSDDDMGFGLFD 112


>AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p
           protein.
          Length = 112

 Score = 80.2 bits (189), Expect = 6e-16
 Identities = 42/79 (53%), Positives = 44/79 (55%)
 Frame = +3

Query: 3   AAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXX 182
           AA V+VEPYWPGLFAKALEGINV+DLITNIGSGV                          
Sbjct: 34  AANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEK 93

Query: 183 XXXXXXXXSDDDMGFGLFD 239
                   SDDDMGFGLFD
Sbjct: 94  KKEEESDQSDDDMGFGLFD 112


>AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA
           protein.
          Length = 112

 Score = 80.2 bits (189), Expect = 6e-16
 Identities = 42/79 (53%), Positives = 44/79 (55%)
 Frame = +3

Query: 3   AAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXX 182
           AA V+VEPYWPGLFAKALEGINV+DLITNIGSGV                          
Sbjct: 34  AANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEK 93

Query: 183 XXXXXXXXSDDDMGFGLFD 239
                   SDDDMGFGLFD
Sbjct: 94  KKEEESDQSDDDMGFGLFD 112


>Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for A-type ribosomal protein
           rp21C. ).
          Length = 112

 Score = 77.8 bits (183), Expect = 3e-15
 Identities = 41/79 (51%), Positives = 43/79 (54%)
 Frame = +3

Query: 3   AAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXX 182
           AA V+VEPYWPGLFAKALE INV+DLITNIGSGV                          
Sbjct: 34  AANVEVEPYWPGLFAKALEAINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEK 93

Query: 183 XXXXXXXXSDDDMGFGLFD 239
                   SDDDMGFGLFD
Sbjct: 94  KKEEESDQSDDDMGFGLFD 112


>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 210 DDDMGFGLFD 239
           DDDMGFGLFD
Sbjct: 308 DDDMGFGLFD 317


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 210 DDDMGFGLFD 239
           DDDMGFGLFD
Sbjct: 308 DDDMGFGLFD 317


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 210 DDDMGFGLFD 239
           DDDMGFGLFD
Sbjct: 308 DDDMGFGLFD 317


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 210 DDDMGFGLFD 239
           DDDMGFGLFD
Sbjct: 308 DDDMGFGLFD 317


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,114,586
Number of Sequences: 53049
Number of extensions: 115281
Number of successful extensions: 271
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 267
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)