Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14f01
(604 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical pr... 113 7e-26
U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical pr... 33 0.21
AF000299-10|AAC47986.1| 338|Caenorhabditis elegans Seven tm rec... 30 1.1
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 27 7.8
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z78016-5|CAB01442.2| 479|Caenorhabditis elegans Hypothetical pr... 27 7.8
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 27 7.8
>Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical
protein ZK829.4 protein.
Length = 536
Score = 113 bits (273), Expect = 7e-26
Identities = 51/111 (45%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
Frame = +1
Query: 271 ASHEIPDKLKDIPTSANPKFFHMVEYFFHRACQVVEDKLVEDLKSRTPIEEKKKK-VAGI 447
A ++ D+ K + NP F+ MV+++F++ +V+ KL E+LKS + ++ KK V+GI
Sbjct: 24 AHSQVLDEQKPMEEQVNPSFYKMVDFYFNKGAEVIAPKLAEELKSNSLSQKDKKNLVSGI 83
Query: 448 LKLMEPCDHILEIQFPLRRDSGDYEMILGYRAQHSTHRTPTKGGIRFSTDV 600
L ++P + +L I FP+RRD+G++E+I +RAQHS HRTPTKGGIR+S DV
Sbjct: 84 LGAIKPVNKVLYITFPIRRDNGEFEVIEAWRAQHSEHRTPTKGGIRYSLDV 134
>U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical
protein T28D9.7 protein.
Length = 982
Score = 32.7 bits (71), Expect = 0.21
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Frame = +1
Query: 190 KNSVQNEAL--NTMFRIIPAGVNVCCRTYASHEIPDKLKDIPTSANPKFFHMVEYFFHRA 363
++ V+ E L N F + G C S I + K AN FF + E F+R
Sbjct: 443 EDDVEQEELDENVSFSTVSGGETFSCED-KSRPITSEEK----KANQMFFLLDETAFNR- 496
Query: 364 CQVVEDKLVEDLKSR--TPIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDY 519
V DLKSR +++ +++A IL++ME H+ +R +GD+
Sbjct: 497 -NATRYMSVGDLKSRYGDKVDDVAEEIAVILRIMEKLWHVFMPDSYIRTMTGDF 549
>AF000299-10|AAC47986.1| 338|Caenorhabditis elegans Seven tm
receptor protein 162 protein.
Length = 338
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 558 VCGMLCAIA*YHFVIARIAPQRKLNLKNVIAWF 460
+CG+L + HF+ A QRK NLK W+
Sbjct: 95 ICGVLMPMFVVHFIFRYFAMQRKGNLKYFEGWY 127
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical
protein W06A7.3f protein.
Length = 2488
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 412 PIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 531
PIE +++ + K E CDH+++ Q L R S E I+
Sbjct: 444 PIENSEQETVAV-KATESCDHVVDSQKTLERASSLEEDIM 482
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical
protein W06A7.3c protein.
Length = 2484
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 412 PIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 531
PIE +++ + K E CDH+++ Q L R S E I+
Sbjct: 444 PIENSEQETVAV-KATESCDHVVDSQKTLERASSLEEDIM 482
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical
protein W06A7.3a protein.
Length = 2607
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 412 PIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 531
PIE +++ + K E CDH+++ Q L R S E I+
Sbjct: 444 PIENSEQETVAV-KATESCDHVVDSQKTLERASSLEEDIM 482
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 379 DKLVEDLKSRTPIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 531
+KL E L K +++ + L +P D I FP R S YEM++
Sbjct: 137 EKLNEQLADTNNRPFKDIRISHTIVLDDPFDEDARISFPPRSPSPTYEMLV 187
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 280 EIPDKLKDIPTSANPKFFHM--VEYFFHRACQVVEDKLVEDLKSRTPIEEKKKKVAGILK 453
EI KL + S K H V+ + +ED L + ++R ++++K+KV G LK
Sbjct: 1010 EINRKLMEDLQSEEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELK 1069
Query: 454 LME 462
+ +
Sbjct: 1070 IAQ 1072
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 280 EIPDKLKDIPTSANPKFFHM--VEYFFHRACQVVEDKLVEDLKSRTPIEEKKKKVAGILK 453
EI KL + S K H V+ + +ED L + ++R ++++K+KV G LK
Sbjct: 1010 EINRKLMEDLQSEEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELK 1069
Query: 454 LME 462
+ +
Sbjct: 1070 IAQ 1072
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 379 DKLVEDLKSRTPIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 531
+KL E L K +++ + L +P D I FP R S YEM++
Sbjct: 137 EKLNEQLADTNNRPFKDIRISHTIVLDDPFDEDARISFPPRSPSPTYEMLV 187
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 379 DKLVEDLKSRTPIEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 531
+KL E L K +++ + L +P D I FP R S YEM++
Sbjct: 68 EKLNEQLADTNNRPFKDIRISHTIVLDDPFDEDARISFPPRSPSPTYEMLV 118
>Z78016-5|CAB01442.2| 479|Caenorhabditis elegans Hypothetical
protein R186.5 protein.
Length = 479
Score = 27.5 bits (58), Expect = 7.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 145 WWLIMLSTKIGLGIGSPYTY 86
WW I+ T IG G +P+TY
Sbjct: 368 WWAIVTMTTIGYGDITPHTY 387
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 280 EIPDKLKDIPTSANPKFFHM--VEYFFHRACQVVEDKLVEDLKSRTPIEEKKKKVAGILK 453
EI KL + S K H V+ + +ED L + ++R ++++K+KV G LK
Sbjct: 1013 EINRKLMEDLQSEEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELK 1072
Query: 454 LME 462
+ +
Sbjct: 1073 IAQ 1075
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,705,248
Number of Sequences: 27780
Number of extensions: 317368
Number of successful extensions: 840
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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