Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14e24
(418 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309 59 2e-09
05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887 58 2e-09
11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733 54 6e-08
01_06_0447 + 29452194-29452361,29453232-29453317,29453403-294536... 48 4e-06
07_03_0117 + 13589997-13590998 46 1e-05
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 46 1e-05
01_05_0410 + 21914995-21915168,21915268-21915353,21915446-219156... 45 2e-05
02_02_0134 + 7082462-7082627,7084199-7084325,7084404-7084611,708... 42 3e-04
02_01_0763 - 5665010-5665202,5665285-5665375,5665460-5666245,566... 41 3e-04
06_03_0691 + 23552437-23552914,23555168-23555953,23556045-235561... 41 5e-04
05_06_0233 + 26599068-26599466,26601214-26601829,26601871-266019... 40 6e-04
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 40 0.001
01_01_1139 - 9024609-9024708,9024832-9024910,9025083-9025252,902... 38 0.002
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 38 0.002
04_04_0048 + 22351788-22352177,22353175-22353711 38 0.004
05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717 35 0.030
03_01_0534 + 3996479-3997458,3997938-3998265 35 0.030
10_07_0101 - 12872296-12873288 34 0.040
01_07_0083 + 40970890-40971015,40971886-40971994,40972679-409727... 33 0.12
03_01_0644 - 4719954-4720022,4720445-4720912,4721009-4721312,472... 32 0.21
05_04_0010 - 17132810-17132935,17133017-17133169,17133202-171332... 31 0.49
01_01_0877 - 6878905-6879600,6880696-6880968 30 0.86
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 29 2.0
12_01_0019 - 135627-135983,136564-136797,137118-137196,137268-13... 28 2.6
11_01_0021 - 143576-143932,144434-144667,144988-145066,145138-14... 28 2.6
07_01_1210 - 11538233-11538349,11538532-11538612,11538697-115387... 28 2.6
02_01_0768 + 5736778-5737341,5737451-5737612,5738678-5738707 28 2.6
03_05_0791 + 27736978-27737217,27737648-27739191,27739512-277397... 28 3.5
05_04_0386 + 20822376-20822982,20823715-20824244,20824315-20825127 27 4.6
03_06_0369 + 33425251-33425778,33425864-33426051,33426152-334262... 27 4.6
09_04_0521 - 18297343-18297840 27 8.0
05_01_0445 + 3547176-3547577,3548625-3549557,3550246-3550524,355... 27 8.0
04_04_0575 - 26342697-26342885,26343030-26343165,26343279-263437... 27 8.0
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 27 8.0
02_05_0243 - 27124559-27124864,27126922-27126990,27127741-271279... 27 8.0
01_05_0099 - 18098169-18098390,18098878-18098972,18099063-180991... 27 8.0
>02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309
Length = 382
Score = 58.8 bits (136), Expect = 2e-09
Identities = 33/54 (61%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Frame = +1
Query: 253 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVR 411
F DFL GG+SAAVSKTA APIERVKLL+Q Q + K + YKGI D F R
Sbjct: 82 FMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGR 135
>05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887
Length = 380
Score = 58.4 bits (135), Expect = 2e-09
Identities = 31/54 (57%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +1
Query: 253 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVR 411
F DF+ GG+SAAVSKTA APIER+KLL+Q Q + K YKGI D F R
Sbjct: 80 FMIDFMMGGVSAAVSKTAAAPIERIKLLIQNQDEMIKSGRLSHPYKGIADCFGR 133
>11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733
Length = 329
Score = 53.6 bits (123), Expect = 6e-08
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +1
Query: 250 AFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRI 414
A A DF GG +A V+KT AP+ERVKLLLQ Q + ++ + + Y+GI DAF R+
Sbjct: 23 AAAADFAMGGAAAVVAKTGAAPVERVKLLLQNQAEMLRRGSLTRPYRGIADAFGRV 78
>01_06_0447 +
29452194-29452361,29453232-29453317,29453403-29453610,
29454252-29454381,29454561-29454745,29454858-29454989,
29455747-29455851
Length = 337
Score = 47.6 bits (108), Expect = 4e-06
Identities = 19/32 (59%), Positives = 28/32 (87%)
Frame = +1
Query: 253 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 348
FAK+ +AGG++ A SKTA+AP+ER+K+LLQ +
Sbjct: 27 FAKEMIAGGVAGAFSKTAIAPLERLKILLQTR 58
>07_03_0117 + 13589997-13590998
Length = 333
Score = 46.0 bits (104), Expect = 1e-05
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +1
Query: 250 AFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGI 393
AFA++ +AGG++ V+KTAVAP+ERV L+ QV + A Q + I
Sbjct: 40 AFAREMVAGGVAGVVAKTAVAPLERVNLMRQVGAAPRGAGAVQMLREI 87
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 46.0 bits (104), Expect = 1e-05
Identities = 19/35 (54%), Positives = 28/35 (80%)
Frame = +1
Query: 247 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQH 351
++ K AGG++ VS+TAVAP+ER+K+LLQVQ+
Sbjct: 41 LSICKSLFAGGVAGGVSRTAVAPLERMKILLQVQN 75
>01_05_0410 +
21914995-21915168,21915268-21915353,21915446-21915656,
21915869-21915998,21916740-21916924,21917014-21917145,
21917329-21917433
Length = 340
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/32 (59%), Positives = 27/32 (84%)
Frame = +1
Query: 253 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 348
+AK+ +AGG + A +KTAVAP+ERVK+LLQ +
Sbjct: 29 YAKELIAGGAAGAFAKTAVAPLERVKILLQTR 60
>02_02_0134 +
7082462-7082627,7084199-7084325,7084404-7084611,
7084864-7084990,7085071-7085255,7085332-7085454,
7085777-7085836,7085980-7086117
Length = 377
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/35 (51%), Positives = 28/35 (80%)
Frame = +1
Query: 244 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 348
P+A ++ +AGG++ V+KTAVAP+ERVK+L Q +
Sbjct: 23 PLA-VRELVAGGVAGGVAKTAVAPLERVKILFQAR 56
>02_01_0763 -
5665010-5665202,5665285-5665375,5665460-5666245,
5667745-5668225
Length = 516
Score = 41.1 bits (92), Expect = 3e-04
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +1
Query: 256 AKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 348
+K +AGG+S A S+TA AP++R+K+++QVQ
Sbjct: 234 SKYLIAGGVSGATSRTATAPLDRLKVIMQVQ 264
Score = 31.5 bits (68), Expect = 0.28
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +1
Query: 220 NKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQ 342
+K N +D + + +AGG++ AV++TA+ PI+ VK LQ
Sbjct: 318 SKGENKSD-IGTSGRLMAGGLAGAVAQTAIYPIDLVKTRLQ 357
>06_03_0691 +
23552437-23552914,23555168-23555953,23556045-23556135,
23556214-23556406
Length = 515
Score = 40.7 bits (91), Expect = 5e-04
Identities = 17/38 (44%), Positives = 29/38 (76%)
Frame = +1
Query: 235 LADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 348
++ V +K +AGGI+ A S+TA AP++R+K+++QVQ
Sbjct: 226 ISKSVNASKYLIAGGIAGAASRTATAPLDRLKVIMQVQ 263
Score = 30.3 bits (65), Expect = 0.65
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +1
Query: 268 LAGGISAAVSKTAVAPIERVKLLLQ 342
+AGG++ AV++TA+ P++ VK LQ
Sbjct: 332 VAGGLAGAVAQTAIYPVDLVKTRLQ 356
>05_06_0233 +
26599068-26599466,26601214-26601829,26601871-26601917,
26602101-26602268
Length = 409
Score = 40.3 bits (90), Expect = 6e-04
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 253 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQ-IAADQRYKGIVDAFVR 411
F +D +AG T VAPIER KLLLQ Q + + +R++G D R
Sbjct: 48 FERDLVAGAAMGGAVHTVVAPIERAKLLLQTQDGNAALLGRARRFRGFADCVAR 101
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +1
Query: 268 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIA 369
LAGG++ AVSKT AP+ R+ +L QVQ + +A
Sbjct: 41 LAGGVAGAVSKTCTAPLARLTILFQVQGMHSDVA 74
>01_01_1139 -
9024609-9024708,9024832-9024910,9025083-9025252,
9025339-9025451,9025518-9025586,9025867-9025944,
9026022-9026084,9026590-9026670,9027166-9027222,
9027352-9027705
Length = 387
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 265 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGI 393
F AG + AV+KT AP++RVKLL+Q V ++ + KGI
Sbjct: 93 FAAGAAAGAVAKTITAPLDRVKLLMQTHSV--RVVGESTKKGI 133
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +1
Query: 271 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRY 384
AGG + AVSKT AP+ R+ +L QV + +AA ++Y
Sbjct: 14 AGGFAGAVSKTCTAPLARLTILFQVAGMHSDVAALKKY 51
>04_04_0048 + 22351788-22352177,22353175-22353711
Length = 308
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 268 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI 414
LAGG+S V++ +P + +K+ +Q RY GI DAF +I
Sbjct: 120 LAGGVSGVVAQVVASPADLIKVRMQADSRLLSQGIQPRYTGIFDAFTKI 168
>05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717
Length = 415
Score = 34.7 bits (76), Expect = 0.030
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1
Query: 259 KDFLAGGISAAVSKTAVAPIERVKLLLQV 345
K ++GGI+ AVS+TAVAP+E ++ L V
Sbjct: 136 KRLISGGIAGAVSRTAVAPLETIRTHLMV 164
>03_01_0534 + 3996479-3997458,3997938-3998265
Length = 435
Score = 34.7 bits (76), Expect = 0.030
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 235 LADPVAFAKDFLAGGISAAVSKTAV-APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR 411
+++P A A AGG+SAA++ V P++ + L V Q ++ RY+G VDAF +
Sbjct: 126 VSEPAATAAASAAGGVSAAIAAQVVWTPVDVISQRLMV-----QTSSTCRYRGGVDAFKK 180
Query: 412 I 414
I
Sbjct: 181 I 181
>10_07_0101 - 12872296-12873288
Length = 330
Score = 34.3 bits (75), Expect = 0.040
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 235 LADPVAFAKDFLAGGISAAVSKTAV-APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR 411
+A+P A A AGG+SAAV+ V P++ V L VQ AA Y+G DA R
Sbjct: 131 VAEPAASAAASAAGGVSAAVAAQVVWTPVDVVSQRLMVQ----TAAAGPPYRGGADALRR 186
Query: 412 I 414
I
Sbjct: 187 I 187
>01_07_0083 +
40970890-40971015,40971886-40971994,40972679-40972790,
40972944-40973100,40973609-40973761,40974143-40974292,
40974803-40974999,40975446-40975473
Length = 343
Score = 32.7 bits (71), Expect = 0.12
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 262 DFLAGGISAAVSKTAVAPIERVKLLLQVQ 348
D LAG IS +S+T +P++ +K+ QVQ
Sbjct: 16 DALAGAISGGISRTVTSPLDVIKIRFQVQ 44
>03_01_0644 -
4719954-4720022,4720445-4720912,4721009-4721312,
4722321-4722745
Length = 421
Score = 31.9 bits (69), Expect = 0.21
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 238 ADPVAFAKDFLAGGISAAVSKTAVAPIERVKL 333
A + K +G ++A VS+T VAP+ER+KL
Sbjct: 122 AGAMNMTKHLWSGAVAAMVSRTVVAPLERLKL 153
>05_04_0010 -
17132810-17132935,17133017-17133169,17133202-17133263,
17133384-17133435,17133794-17133883,17134075-17134170,
17134258-17134311,17134575-17134665,17134996-17135072,
17135770-17135852,17136057-17136111
Length = 312
Score = 30.7 bits (66), Expect = 0.49
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 268 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGI 393
+AGG + V +TA+ PI+ +K LQ QI Y G+
Sbjct: 22 IAGGTAGVVVETALYPIDTIKTRLQAARGGSQIQWKGLYSGL 63
>01_01_0877 - 6878905-6879600,6880696-6880968
Length = 322
Score = 29.9 bits (64), Expect = 0.86
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +1
Query: 229 SNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVD 399
S++++P ++ LAG + A+ ++P+E VK+ LQ++ ++ + G VD
Sbjct: 110 SSMSEPPSYTSVALAGVGTGALQTLILSPVELVKIRLQLEAAGQKHRRPGDHHGPVD 166
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 268 LAGGISAAVSKTAVAPIERVKLLLQV 345
++G ++ AVS+T VAP+E ++ L V
Sbjct: 141 VSGAVAGAVSRTCVAPLETIRTHLMV 166
>12_01_0019 -
135627-135983,136564-136797,137118-137196,137268-137383,
137847-137991,138177-138594,138644-138649,139315-139945
Length = 661
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 259 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVS 357
K LAGG+++A+S + + PI+ +K +Q +S
Sbjct: 377 KSALAGGLASALSTSVMHPIDSMKTRVQASSLS 409
>11_01_0021 -
143576-143932,144434-144667,144988-145066,145138-145253,
145717-145861,146048-146465,147206-147869
Length = 670
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 259 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVS 357
K LAGG+++A+S + + PI+ +K +Q +S
Sbjct: 386 KSALAGGLASALSTSVMHPIDSMKTRVQASSLS 418
>07_01_1210 -
11538233-11538349,11538532-11538612,11538697-11538758,
11539108-11539159,11539779-11539868,11539957-11540052,
11540127-11540180,11540314-11540404,11540731-11540807,
11541089-11541171,11541441-11541492
Length = 284
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 268 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGI 393
+AGG + V +TA+ PI+ +K LQ +I Y G+
Sbjct: 21 IAGGAAGVVVETALYPIDTIKTRLQAAKGGSKIQWKGLYAGL 62
>02_01_0768 + 5736778-5737341,5737451-5737612,5738678-5738707
Length = 251
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 268 LAGGISAAVSKTAVAPIERVKLLLQV 345
++G I+ AVS+T VAP+E ++ L V
Sbjct: 132 VSGAIAGAVSRTFVAPLETIRTHLMV 157
>03_05_0791 +
27736978-27737217,27737648-27739191,27739512-27739763,
27739844-27739954,27740042-27740102,27740373-27740558
Length = 797
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 129 KNQELVFRDPPSACAATPTSTYSPSEDHIIEQNVEPRRSGRVR*GL 266
K + + F DP C T T +P DH+ +N P+ + GL
Sbjct: 604 KKEPIGFLDPTQICQTQHTVTLAPGSDHLKGKN--PKEIAEYKKGL 647
>05_04_0386 + 20822376-20822982,20823715-20824244,20824315-20825127
Length = 649
Score = 27.5 bits (58), Expect = 4.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 134 IFEQEIWSNFVITGAQRVGVCLF*NSIDHV 45
+FEQ I SN ++T A GV NS+ H+
Sbjct: 20 LFEQVIGSNVIVTEAPLTGVTAEGNSVLHI 49
>03_06_0369 +
33425251-33425778,33425864-33426051,33426152-33426251,
33426366-33426578,33426616-33426822,33426908-33427095,
33427234-33427492
Length = 560
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 341 WSSSLTRSMGATAVLETAAEIPPARKSLANATGSARFDIL 222
WS ++ R + +T+V AAE P A + + + RFD L
Sbjct: 40 WSRAVARRLLSTSVAAVAAETPRAEDAPSASGKEERFDWL 79
>09_04_0521 - 18297343-18297840
Length = 165
Score = 26.6 bits (56), Expect = 8.0
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 321 ACQAAAPSTARQQADRRRPALQGYRRC 401
A AA PS A R RPA G+RRC
Sbjct: 69 AAAAAGPSLADTFRARFRPARFGHRRC 95
>05_01_0445 +
3547176-3547577,3548625-3549557,3550246-3550524,
3550624-3550752,3550813-3550869
Length = 599
Score = 26.6 bits (56), Expect = 8.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 157 PHPRVPQLPPRHIHLVKI 210
PHPR P L PR +H +++
Sbjct: 23 PHPRRPGLRPRRLHRLRL 40
>04_04_0575 -
26342697-26342885,26343030-26343165,26343279-26343795,
26344286-26344381,26344933-26345011,26345329-26345712
Length = 466
Score = 26.6 bits (56), Expect = 8.0
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 247 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAAD 375
V++++ LAG + AV P E +KL QV V A D
Sbjct: 194 VSYSEAMLAGIAAGAVESVLCTPFELLKLRSQVGSVKPMKATD 236
>03_01_0085 +
690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 26.6 bits (56), Expect = 8.0
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 223 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVD 399
K +NL DP ++ + KT VA E +KLL VS+ A + +GI++
Sbjct: 383 KQNNLRDPQRKSQIICDSRLHRLFRKTRVAHFEMLKLLEMHFIVSEPSAVNDGSQGIIN 441
>02_05_0243 -
27124559-27124864,27126922-27126990,27127741-27127926,
27128572-27129093
Length = 360
Score = 26.6 bits (56), Expect = 8.0
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 180 PTSTYSPSEDHIIEQNVEPRRSGRV 254
P S Y+ ++ ++ + +PRRSGRV
Sbjct: 248 PLSVYTHTDGELMAEFYQPRRSGRV 272
>01_05_0099 -
18098169-18098390,18098878-18098972,18099063-18099131,
18099277-18099352,18101412-18101524,18104137-18104185,
18104540-18104572,18105446-18105552,18106892-18106990,
18107122-18107203
Length = 314
Score = 26.6 bits (56), Expect = 8.0
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +1
Query: 268 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAA 372
+AGG + +S T + P++ +K LQV + +++
Sbjct: 22 IAGGSAGVISATVLCPLDVIKTRLQVYGLPSNLSS 56
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,095,779
Number of Sequences: 37544
Number of extensions: 242745
Number of successful extensions: 871
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 754585524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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