Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14e19
(408 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 30 0.74
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 29 1.3
U41271-3|AAP31439.1| 577|Caenorhabditis elegans Hypothetical pr... 29 1.7
U41271-2|AAA82444.3| 713|Caenorhabditis elegans Hypothetical pr... 29 1.7
U28730-4|AAO38621.1| 228|Caenorhabditis elegans Hypothetical pr... 28 3.0
U28730-3|AAO38622.1| 243|Caenorhabditis elegans Hypothetical pr... 28 3.0
DQ340628-1|ABC65816.1| 228|Caenorhabditis elegans chondroitin p... 28 3.0
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 27 3.9
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 27 3.9
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 27 3.9
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z81038-6|CAB02756.1| 233|Caenorhabditis elegans Hypothetical pr... 27 5.2
DQ340627-1|ABC65815.1| 233|Caenorhabditis elegans chondroitin p... 27 5.2
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 26 9.1
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 26 9.1
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 29.9 bits (64), Expect = 0.74
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = -3
Query: 352 RCPNCNQVCR-RAQFQDLCKNLLHCRILRSCRCARICT*NCA--CCI*MNPI*RCATIVG 182
+C C C+ + +L + +S +C C +C C + PI +CAT
Sbjct: 470 QCQQCQSACQFPVVAPQVVAVILEASVSQSAQCEPQCQQSCQQQCIQQLQPIQQCATACT 529
Query: 181 RLCGTFCS 158
+ C CS
Sbjct: 530 QSCSQSCS 537
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -3
Query: 340 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 224
C C R + C+ C R+C C R CT CC
Sbjct: 64 CGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPCC 102
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = -3
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCAC 227
P C CR C+ C R C C R C C C
Sbjct: 71 PRCCCCCRPKCCCTCCRT---CCCTRCCTCCRPCCCGCGC 107
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -3
Query: 340 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 224
C C R + C+ C R+C C R CT CC
Sbjct: 66 CGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPCC 104
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = -3
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCAC 227
P C CR C+ C R C C R C C C
Sbjct: 73 PRCCCCCRPKCCCTCCRT---CCCTRCCTCCRPCCCGCGC 109
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -3
Query: 340 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 224
C C R + C+ C R+C C R CT CC
Sbjct: 69 CGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPCC 107
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = -3
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCAC 227
P C CR C+ C R C C R C C C
Sbjct: 76 PRCCCCCRPKCCCTCCRT---CCCTRCCTCCRPCCCGCGC 112
>U41271-3|AAP31439.1| 577|Caenorhabditis elegans Hypothetical
protein C46H3.2b protein.
Length = 577
Score = 28.7 bits (61), Expect = 1.7
Identities = 18/76 (23%), Positives = 36/76 (47%)
Frame = +1
Query: 148 DPDDYKKYHINVQQWSHIVKWDSFKCNTHSFKYRYVHNDTNAKFYNVIDFCKGLEIAHDD 327
+PD KK ++ W I +W S N +S + ++H A++ + + + ++ D
Sbjct: 243 NPDHRKKLMSDIHSWKIIDQWPSVVPN-NSLR-EWLHAIALAEYIPMFESQRYTSVS--D 298
Query: 328 ILDCNWDSGSSLPFKR 375
+LD W+ + KR
Sbjct: 299 VLDLQWEDFEDIGVKR 314
>U41271-2|AAA82444.3| 713|Caenorhabditis elegans Hypothetical
protein C46H3.2a protein.
Length = 713
Score = 28.7 bits (61), Expect = 1.7
Identities = 18/76 (23%), Positives = 36/76 (47%)
Frame = +1
Query: 148 DPDDYKKYHINVQQWSHIVKWDSFKCNTHSFKYRYVHNDTNAKFYNVIDFCKGLEIAHDD 327
+PD KK ++ W I +W S N +S + ++H A++ + + + ++ D
Sbjct: 379 NPDHRKKLMSDIHSWKIIDQWPSVVPN-NSLR-EWLHAIALAEYIPMFESQRYTSVS--D 434
Query: 328 ILDCNWDSGSSLPFKR 375
+LD W+ + KR
Sbjct: 435 VLDLQWEDFEDIGVKR 450
>U28730-4|AAO38621.1| 228|Caenorhabditis elegans Hypothetical
protein K10B2.3a protein.
Length = 228
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 353 PLSQLQSSMSSCAISRPLQKSITL*NFAFVSLCTYLYLKLC 231
PL S +++CA S S+ ++ + CTYL+ +C
Sbjct: 177 PLVNGWSQLANCAASYKSPASLETASYTYFYPCTYLFYSIC 217
>U28730-3|AAO38622.1| 243|Caenorhabditis elegans Hypothetical
protein K10B2.3b protein.
Length = 243
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 353 PLSQLQSSMSSCAISRPLQKSITL*NFAFVSLCTYLYLKLC 231
PL S +++CA S S+ ++ + CTYL+ +C
Sbjct: 192 PLVNGWSQLANCAASYKSPASLETASYTYFYPCTYLFYSIC 232
>DQ340628-1|ABC65816.1| 228|Caenorhabditis elegans chondroitin
proteoglycan-6 protein.
Length = 228
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 353 PLSQLQSSMSSCAISRPLQKSITL*NFAFVSLCTYLYLKLC 231
PL S +++CA S S+ ++ + CTYL+ +C
Sbjct: 177 PLVNGWSQLANCAASYKSPASLETASYTYFYPCTYLFYSIC 217
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -3
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCAC 227
P C CRR C C R C C R C C C
Sbjct: 91 PRCCCCCRRC-----CTCCRTCCCTRCCTCCRPCCCGCGC 125
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -3
Query: 340 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 224
C C R + C+ C R+C C R CT CC
Sbjct: 84 CGCCCCRPRCCCCCRRC--CTCCRTCCCTRCCTCCRPCC 120
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -3
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCAC 227
P C CRR C C R C C R C C C
Sbjct: 89 PRCCCCCRRC-----CTCCRTCCCTRCCTCCRPCCCGCGC 123
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -3
Query: 340 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 224
C C R + C+ C R+C C R CT CC
Sbjct: 82 CGCCCCRPRCCCCCRRC--CTCCRTCCCTRCCTCCRPCC 118
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -3
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCAC 227
P C CRR C C R C C R C C C
Sbjct: 90 PKCCCCCRRC-----CTCCRTCCCTRCCTCCRPCCCGCGC 124
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -3
Query: 340 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 224
C C R + C+ C R+C C R CT CC
Sbjct: 83 CGCCCCRPKCCCCCRRC--CTCCRTCCCTRCCTCCRPCC 119
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -3
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCAC 227
P C CRR C C R C C R C C C
Sbjct: 90 PRCCCCCRRC-----CTCCRTCCCTRCCTCCRPCCCGCGC 124
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -3
Query: 340 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 224
C C R + C+ C R+C C R CT CC
Sbjct: 83 CGCCCCRPRCCCCCRRC--CTCCRTCCCTRCCTCCRPCC 119
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -3
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCAC 227
P C CRR C C R C C R C C C
Sbjct: 91 PRCCCCCRRC-----CTCCRTCCCTRCCTCCRPCCCGCGC 125
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -3
Query: 340 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 224
C C R + C+ C R+C C R CT CC
Sbjct: 84 CGCCCCRPRCCCCCRRC--CTCCRTCCCTRCCTCCRPCC 120
>Z81038-6|CAB02756.1| 233|Caenorhabditis elegans Hypothetical
protein C25A1.8 protein.
Length = 233
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 353 PLSQLQSSMSSCAISRPLQKSITL*NFAFVSLCTYLYLKLC 231
PL SS+++CA S S+ ++ + CTY+ +C
Sbjct: 182 PLFNGWSSLANCAASYKSPSSLESASYTYFYPCTYMLYSIC 222
>DQ340627-1|ABC65815.1| 233|Caenorhabditis elegans chondroitin
proteoglycan-5 protein.
Length = 233
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 353 PLSQLQSSMSSCAISRPLQKSITL*NFAFVSLCTYLYLKLC 231
PL SS+++CA S S+ ++ + CTY+ +C
Sbjct: 182 PLFNGWSSLANCAASYKSPSSLESASYTYFYPCTYMLYSIC 222
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 26.2 bits (55), Expect = 9.1
Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = -3
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NC--ACCI*MNPI*RCATIVGRLC 173
P C Q C + + +++ + S +CA C C C + P+ +C + C
Sbjct: 173 PQCQQQCVQQCAPTVAPQVINVNLGISAQCAPQCQQQCQQQCLLQQVPVQQCYQECTQPC 232
Query: 172 GTFC 161
T C
Sbjct: 233 QTTC 236
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 26.2 bits (55), Expect = 9.1
Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = -3
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NC--ACCI*MNPI*RCATIVGRLC 173
P C Q C + + +++ + S +CA C C C + P+ +C + C
Sbjct: 174 PQCQQQCVQQCAPTVAPQVINVNLGISAQCAPQCQQQCQQQCLLQQVPVQQCYQECTQPC 233
Query: 172 GTFC 161
T C
Sbjct: 234 QTTC 237
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,417,228
Number of Sequences: 27780
Number of extensions: 137032
Number of successful extensions: 532
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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