Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14e11
(524 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018706-1|AAH18706.1| 480|Homo sapiens TNS4 protein protein. 32 1.1
AK027856-1|BAB55413.1| 480|Homo sapiens protein ( Homo sapiens ... 31 2.5
AF417488-1|AAN32666.1| 715|Homo sapiens C-terminal tensin-like ... 31 2.5
AF090139-1|AAC35985.1| 105|Homo sapiens immunoglobulin heavy ch... 31 2.5
AF090138-1|AAC35984.1| 105|Homo sapiens immunoglobulin heavy ch... 31 2.5
DQ427109-1|ABD72605.1| 1048|Homo sapiens OTUD4: OTU domain conta... 30 4.3
BC118653-1|AAI18654.1| 1049|Homo sapiens OTU domain containing 4... 30 4.3
BC118572-1|AAI18573.1| 1049|Homo sapiens OTU domain containing 4... 30 4.3
AK096878-1|BAC04881.1| 317|Homo sapiens protein ( Homo sapiens ... 30 5.7
AJ578053-1|CAE17331.1| 317|Homo sapiens VITO1 protein protein. 30 5.7
AY003868-1|AAK11833.1| 105|Homo sapiens immunoglobulin mu heavy... 29 7.6
>BC018706-1|AAH18706.1| 480|Homo sapiens TNS4 protein protein.
Length = 480
Score = 32.3 bits (70), Expect = 1.1
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +1
Query: 109 LKSATMGSSPINFHGSISLMRMAPKPSAL*HPNMTRNMTRLYFRPPLPKDSVSDLPSFLT 288
L+S SS ++ GS+SL A +P +T R PPL K+ S P +T
Sbjct: 72 LESPANSSSSLHSLGSVSLCTRPSDFQAPRNPTLTMGQPRTPHSPPLAKEHASSCPPSIT 131
Query: 289 DFLL 300
+ ++
Sbjct: 132 NSMV 135
>AK027856-1|BAB55413.1| 480|Homo sapiens protein ( Homo sapiens
cDNA FLJ14950 fis, clone PLACE2000371, weakly similar to
TENSIN. ).
Length = 480
Score = 31.1 bits (67), Expect = 2.5
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +1
Query: 109 LKSATMGSSPINFHGSISLMRMAPKPSAL*HPNMTRNMTRLYFRPPLPKDSVSDLPSFLT 288
L+S SS ++ GS+SL A +P +T R PPL K+ S P +T
Sbjct: 72 LESPANSSSSLHSLGSVSLCTRPSDFQAPRNPTLTMGQPRTPHSPPLAKEHASICPPSIT 131
Query: 289 DFLL 300
+ ++
Sbjct: 132 NSMV 135
>AF417488-1|AAN32666.1| 715|Homo sapiens C-terminal tensin-like
protein protein.
Length = 715
Score = 31.1 bits (67), Expect = 2.5
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +1
Query: 109 LKSATMGSSPINFHGSISLMRMAPKPSAL*HPNMTRNMTRLYFRPPLPKDSVSDLPSFLT 288
L+S SS ++ GS+SL A +P +T R PPL K+ S P +T
Sbjct: 307 LESPANSSSSLHSLGSVSLCTRPSDFQAPRNPTLTMGQPRTPHSPPLAKEHASICPPSIT 366
Query: 289 DFLL 300
+ ++
Sbjct: 367 NSMV 370
>AF090139-1|AAC35985.1| 105|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 105
Score = 31.1 bits (67), Expect = 2.5
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 120 HNGEFSNQF-PWVDLPYENGAQTLSVIAPKHDSKYDPTLLS 239
H G FSN F W+ P G + + I P + Y+P+L S
Sbjct: 25 HGGSFSNYFWSWIRQPPGKGLEWIGEINPSGRTDYNPSLKS 65
>AF090138-1|AAC35984.1| 105|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 105
Score = 31.1 bits (67), Expect = 2.5
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 120 HNGEFSNQF-PWVDLPYENGAQTLSVIAPKHDSKYDPTLLS 239
H G FSN F W+ P G + + I P + Y+P+L S
Sbjct: 25 HGGSFSNYFWSWIRQPPGKGLEWIGEINPSGRTDYNPSLKS 65
>DQ427109-1|ABD72605.1| 1048|Homo sapiens OTUD4: OTU domain
containing 4 protein.
Length = 1048
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +3
Query: 57 DYKTVAALMMEPRDPDSFEIRHNGEFSNQFPWVDLPYENGAQTLSVIAPKHDSK 218
DY A L E D + HNG+F N + ENG + + KH SK
Sbjct: 209 DYSIAAGLQYEVGDKCQVRLDHNGKFLNA-DVQGIHSENGPVLVEELGKKHTSK 261
>BC118653-1|AAI18654.1| 1049|Homo sapiens OTU domain containing 4
protein.
Length = 1049
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +3
Query: 57 DYKTVAALMMEPRDPDSFEIRHNGEFSNQFPWVDLPYENGAQTLSVIAPKHDSK 218
DY A L E D + HNG+F N + ENG + + KH SK
Sbjct: 210 DYSIAAGLQYEVGDKCQVRLDHNGKFLNA-DVQGIHSENGPVLVEELGKKHTSK 262
>BC118572-1|AAI18573.1| 1049|Homo sapiens OTU domain containing 4
protein.
Length = 1049
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +3
Query: 57 DYKTVAALMMEPRDPDSFEIRHNGEFSNQFPWVDLPYENGAQTLSVIAPKHDSK 218
DY A L E D + HNG+F N + ENG + + KH SK
Sbjct: 210 DYSIAAGLQYEVGDKCQVRLDHNGKFLNA-DVQGIHSENGPVLVEELGKKHTSK 262
>AK096878-1|BAC04881.1| 317|Homo sapiens protein ( Homo sapiens
cDNA FLJ39559 fis, clone SKMUS2000701, weakly similar to
VESTIGIAL PROTEIN. ).
Length = 317
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 162 PYENGAQTLSVIAPKHDSKYDPTLLSASIAKRLRFRPSFLPYRLSPSDEVLG 317
PY A V AP D +Y P L+ A+ + R + P SP E+ G
Sbjct: 220 PYPRPAAVHEVYAPHFDPRYGPLLMPAASGRPARLATAPAPAPGSPPCELSG 271
>AJ578053-1|CAE17331.1| 317|Homo sapiens VITO1 protein protein.
Length = 317
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 162 PYENGAQTLSVIAPKHDSKYDPTLLSASIAKRLRFRPSFLPYRLSPSDEVLG 317
PY A V AP D +Y P L+ A+ + R + P SP E+ G
Sbjct: 220 PYPRPAAVHEVYAPHFDPRYGPLLMPAASGRPARLATAPAPAPGSPPCELSG 271
>AY003868-1|AAK11833.1| 105|Homo sapiens immunoglobulin mu heavy
chain variable region protein.
Length = 105
Score = 29.5 bits (63), Expect = 7.6
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 120 HNGEFSNQF-PWVDLPYENGAQTLSVIAPKHDSKYDPTLLS 239
+ G FS+ + W+ P G + + I+P +KY+P+L S
Sbjct: 2 YGGSFSDYYWRWIRQPPGKGVEWIGEISPSGGTKYNPSLKS 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,148,042
Number of Sequences: 237096
Number of extensions: 2112213
Number of successful extensions: 5384
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5384
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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