Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14d22
         (481 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical pr...    29   2.3  
AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ...    27   9.3  

>Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical
           protein ZK666.7 protein.
          Length = 403

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -3

Query: 476 TKILFTLSVIVVVTSGSQPLAWHIGLS 396
           TK  FTL VI  +T+ +QP  ++IGLS
Sbjct: 295 TKHDFTLQVIENITAFTQPYTYYIGLS 321


>AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical
           protein Y87G2A.5 protein.
          Length = 1050

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 480 DDQNFVHVVGYCCCHVWITTTGM 412
           DDQ + H+VG  C H +I T  +
Sbjct: 333 DDQRYKHLVGKQCIHPFIPTRNL 355


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,702,814
Number of Sequences: 27780
Number of extensions: 202448
Number of successful extensions: 367
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)