Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14d19
(582 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46935-6|CAL36509.1| 128|Caenorhabditis elegans Hypothetical pr... 47 8e-06
U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcript... 31 0.60
AL021175-5|CAA15967.1| 357|Caenorhabditis elegans Hypothetical ... 29 2.4
AF000198-6|AAB53056.2| 526|Caenorhabditis elegans Calcium chann... 29 2.4
Z83127-6|CAB05633.1| 327|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z80214-6|CAB02266.1| 327|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z72509-1|CAA96645.1| 339|Caenorhabditis elegans Hypothetical pr... 29 3.2
U41016-4|AAP46275.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.2
U41016-2|AAM51496.1| 899|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical pr... 28 4.2
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 5.6
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 5.6
Z68217-5|CAC70098.1| 166|Caenorhabditis elegans Hypothetical pr... 27 7.4
AL023847-8|CAI46616.1| 262|Caenorhabditis elegans Hypothetical ... 27 7.4
Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z49132-6|CAA88985.1| 406|Caenorhabditis elegans Hypothetical pr... 27 9.7
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 27 9.7
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 27 9.7
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 27 9.7
>Z46935-6|CAL36509.1| 128|Caenorhabditis elegans Hypothetical
protein M106.7 protein.
Length = 128
Score = 47.2 bits (107), Expect = 8e-06
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +1
Query: 352 METIKANSAFLCNYEVMQILQKLK--DNTHKKHKREASLATVTYETVHYLQDTECKNQSA 525
ME +K L N EV+ L LK ++ ++H+R L+TV YET YL + Q+
Sbjct: 1 MEVLKTRETMLTNQEVLSFLNALKKEEDNKQQHERCKQLSTVIYETKKYLNTSPAVTQNE 60
Query: 526 QKIQKFLEAMKKYKLTKVE 582
I + + + +KLT E
Sbjct: 61 AVICELIPKLAPFKLTGAE 79
>U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcription
factor) homologprotein 1 protein.
Length = 759
Score = 31.1 bits (67), Expect = 0.60
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Frame = -2
Query: 425 SFNFWRICITS*LHRNAELAFIVSMFKF------NTYHLVFDFSNVS 303
+FNF+++C++ L R + +V++ + NT HL+ DFS+V+
Sbjct: 105 AFNFYKMCVSRNLTRGRNRSSVVAVCMYITCRLENTAHLLLDFSDVT 151
>AL021175-5|CAA15967.1| 357|Caenorhabditis elegans Hypothetical
protein Y6E2A.6 protein.
Length = 357
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -2
Query: 296 FGLFLKYIHEGPNIENIPHLTLLY--TCFLWLDLYFLDIVYIAYL 168
FG F+ N+E + LL TCF WLD+YF +I+ I Y+
Sbjct: 32 FGTFIIVFKTPKNMEKVKISILLMHLTCF-WLDIYF-NILSIPYM 74
>AF000198-6|AAB53056.2| 526|Caenorhabditis elegans Calcium channel,
beta subunit protein1 protein.
Length = 526
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +1
Query: 259 LGPSWIYFK-NKPKASDTLEKSNTK*YVLNLNMETIKANSAFLCNYEVMQIL 411
L P +Y K + PK L KS K N+N++ + A C E+ +L
Sbjct: 309 LAPIHVYIKISSPKVLQRLIKSRGKSQSRNMNVQMVAAEKLAQCQAELFDVL 360
>Z83127-6|CAB05633.1| 327|Caenorhabditis elegans Hypothetical
protein C27D8.1 protein.
Length = 327
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 475 YETVHYLQDTECKNQSAQKIQKFLEAMKKYKL 570
+ V+ +QD + K QSA K+++ +E K KL
Sbjct: 35 FGAVYLVQDNKSKKQSAMKVERKIEKRKHSKL 66
>Z80214-6|CAB02266.1| 327|Caenorhabditis elegans Hypothetical
protein C27D8.1 protein.
Length = 327
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 475 YETVHYLQDTECKNQSAQKIQKFLEAMKKYKL 570
+ V+ +QD + K QSA K+++ +E K KL
Sbjct: 35 FGAVYLVQDNKSKKQSAMKVERKIEKRKHSKL 66
>Z72509-1|CAA96645.1| 339|Caenorhabditis elegans Hypothetical
protein F32G8.1 protein.
Length = 339
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = -2
Query: 350 FKFNTYHLVFDFSNVSLAFGLFLKYIHEGPNIENIPHLTLLYTCFLWLDLYFLDIV 183
F F+ + LVFD S+ ++ LF KY + NI N+ ++T + L Y L ++
Sbjct: 98 FSFDFFQLVFDASSFAIPATLFYKYT-KVTNI-NMKNITKNQIRMILLSSYLLSLI 151
>U41016-4|AAP46275.1| 809|Caenorhabditis elegans Hypothetical
protein R11G1.6d protein.
Length = 809
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/84 (23%), Positives = 34/84 (40%)
Frame = +1
Query: 286 NKPKASDTLEKSNTK*YVLNLNMETIKANSAFLCNYEVMQILQKLKDNTHKKHKREASLA 465
N+P AS + K + +K CN V Q Q+++ + K+ +
Sbjct: 705 NEPAASRLMRKGKKLHIYNDHTFVAVKVKGGATCN--VCQ--QRIRSSFSKQAYQCRDCK 760
Query: 466 TVTYETVHYLQDTECKNQSAQKIQ 537
V ++T HY D C + K+Q
Sbjct: 761 MVCHKTCHYKTDAFCTQSNVSKLQ 784
>U41016-2|AAM51496.1| 899|Caenorhabditis elegans Hypothetical protein
R11G1.6a protein.
Length = 899
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/84 (23%), Positives = 34/84 (40%)
Frame = +1
Query: 286 NKPKASDTLEKSNTK*YVLNLNMETIKANSAFLCNYEVMQILQKLKDNTHKKHKREASLA 465
N+P AS + K + +K CN V Q Q+++ + K+ +
Sbjct: 795 NEPAASRLMRKGKKLHIYNDHTFVAVKVKGGATCN--VCQ--QRIRSSFSKQAYQCRDCK 850
Query: 466 TVTYETVHYLQDTECKNQSAQKIQ 537
V ++T HY D C + K+Q
Sbjct: 851 MVCHKTCHYKTDAFCTQSNVSKLQ 874
>Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical
protein T01C3.1 protein.
Length = 727
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +1
Query: 418 LKDNTHKKHKREASLATVTYETVHYLQDTECKNQSAQKIQKFLEAMKKYKLTKV 579
++ +T KK + + +AT+TY+T H + ++ K + + ++ YK+T V
Sbjct: 169 MRVSTVKKMEEDCRMATITYKTAH-PKPSKVLTSGTPKSKAKAKTIEGYKVTSV 221
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 27.9 bits (59), Expect = 5.6
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Frame = +1
Query: 283 KNKPKASDTLEKSNTK*YVLNLNMETIKANSAFLCNYEVMQILQKLKDNTHK-KHKREAS 459
++ PKAS N K +VL + ETI + L + E + + D H+ K+ +
Sbjct: 705 RSGPKASKMKTTENMKFHVLLTSYETINMDKTILSSIEWGAL---VVDEAHRLKNNQSLF 761
Query: 460 LATVTYETVHY---LQDTECKNQSAQKIQKFLEAMKKYKLTKVE 582
+ T+HY L T +N + +++ L + K + ++E
Sbjct: 762 FKNLNEYTIHYRVLLTGTPLQN-NLEELFHLLNFLSKERFNQLE 804
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 5.6
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Frame = +1
Query: 283 KNKPKASDTLEKSNTK*YVLNLNMETIKANSAFLCNYEVMQILQKLKDNTHK-KHKREAS 459
++ PKAS N K +VL + ETI + L + E + + D H+ K+ +
Sbjct: 705 RSGPKASKMKTTENMKFHVLLTSYETINMDKTILSSIEWGAL---VVDEAHRLKNNQSLF 761
Query: 460 LATVTYETVHY---LQDTECKNQSAQKIQKFLEAMKKYKLTKVE 582
+ T+HY L T +N + +++ L + K + ++E
Sbjct: 762 FKNLNEYTIHYRVLLTGTPLQN-NLEELFHLLNFLSKERFNQLE 804
>Z68217-5|CAC70098.1| 166|Caenorhabditis elegans Hypothetical
protein F58G6.7 protein.
Length = 166
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 258 YRKYSTFNFTLYLFSMVRFVLFRYCLYCL 172
+R++ N T Y+FS + L +CL L
Sbjct: 20 FREWKPLNTTAYVFSCIEIFLIAFCLEAL 48
>AL023847-8|CAI46616.1| 262|Caenorhabditis elegans Hypothetical
protein Y57A10C.11 protein.
Length = 262
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 347 KFNTYHLVFDFSNVSLAFGLFLKYIHEGPNIENIPHLTLLYTCFL 213
K + L+F + LA L++ I+ I IP LTLLY C +
Sbjct: 15 KLHNVSLLFSIAISCLAMDLYILPIYNNKPI-TIPVLTLLYCCLV 58
>Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical
protein F23H12.6 protein.
Length = 1025
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 419 NFWRICITS*LHRNAELAFIVSMFKFNTYHLVFDFSNVSLAFGLFLKYIHEGP 261
+FWR C + ++ ++M F Y L+ D ++VS L+YIH P
Sbjct: 580 SFWRYCSRGSI-KDVIAKSSINMDGFFIYCLIKDIASVSRHENPGLQYIHHSP 631
>Z49132-6|CAA88985.1| 406|Caenorhabditis elegans Hypothetical
protein ZK666.6 protein.
Length = 406
Score = 27.1 bits (57), Expect = 9.7
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -2
Query: 482 VSYVTVASEASLLCFLCVLSFN-FWRICITS*LHRNAELAFIVSMFKFNTYHLVFDFSNV 306
VSY V S +C L V FN WR +S ++RN A++V+ F N + V +
Sbjct: 247 VSYTDVHSYRYGVCILPV-GFNAVWRAAKSSCMNRN---AYLVTEFDSNKHDYVLTAVSN 302
Query: 305 SLAFGLFLKYIHEG 264
F + L Y H G
Sbjct: 303 YTGFSVPLTY-HNG 315
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 454 ASLATVTYETVHYLQDTECKNQSAQKIQK-FLEAMKKYKLTK 576
A +A + ET+ ++D + +NQS + Q+ LE++K++ TK
Sbjct: 679 AGMAAIV-ETIQSIEDGKTENQSIRVAQRHLLESVKRFHETK 719
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 454 ASLATVTYETVHYLQDTECKNQSAQKIQK-FLEAMKKYKLTK 576
A +A + ET+ ++D + +NQS + Q+ LE++K++ TK
Sbjct: 679 AGMAAIV-ETIQSIEDGKTENQSIRVAQRHLLESVKRFHETK 719
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 454 ASLATVTYETVHYLQDTECKNQSAQKIQK-FLEAMKKYKLTK 576
A +A + ET+ ++D + +NQS + Q+ LE++K++ TK
Sbjct: 679 AGMAAIV-ETIQSIEDGKTENQSIRVAQRHLLESVKRFHETK 719
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,979,404
Number of Sequences: 27780
Number of extensions: 238902
Number of successful extensions: 694
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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