Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14d11
(447 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0665 - 10268959-10269148,10269344-10269936,10270572-102710... 104 4e-23
12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-31... 98 2e-21
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29... 96 1e-20
07_03_1774 + 29425486-29425831,29426018-29426235,29426337-294271... 66 1e-11
11_04_0388 + 17076157-17076254,17076762-17076813,17077672-170778... 61 5e-10
03_06_0476 + 34199577-34199638,34200267-34200397,34200535-342006... 40 0.001
06_01_1006 + 7836366-7836460,7836568-7836626,7836877-7836961,783... 37 0.006
07_03_0951 - 22836167-22836358,22836455-22837213 33 0.079
11_01_0366 + 2793732-2793838,2793944-2794979 31 0.42
07_01_1060 + 9330217-9330219,9330490-9330561,9330773-9330917,933... 29 2.3
10_05_0042 + 8481227-8481764,8482291-8482418,8483349-8483933,848... 28 3.9
07_01_1064 + 9385330-9385432,9386181-9386236,9386938-9387082,938... 28 3.9
03_05_1051 + 29978655-29979875 28 3.9
03_01_0232 + 1824517-1825506 28 3.9
09_02_0569 - 10752756-10753164,10753229-10753644,10754149-107553... 27 5.2
06_03_1188 + 28269231-28270358 27 5.2
05_05_0305 - 23970692-23970825,23972323-23973703 27 5.2
06_01_1057 + 8441881-8442278,8442464-8442548,8442637-8442867 27 6.9
05_03_0684 - 16944937-16945959,16946074-16946469,16948055-16948330 27 6.9
02_03_0239 + 16738066-16738272 27 6.9
11_01_0346 - 2589111-2589220,2589613-2589852,2589956-2590028,259... 27 9.1
07_03_0476 - 18547223-18548187,18548743-18549958 27 9.1
06_03_0160 + 17366392-17367525,17367856-17368206 27 9.1
01_06_1631 - 38760452-38760466,38760696-38760788,38760838-38761539 27 9.1
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699... 27 9.1
01_01_1191 + 9487835-9488467,9492584-9492787 27 9.1
>03_02_0665 -
10268959-10269148,10269344-10269936,10270572-10271004,
10271172-10272040,10272121-10272915,10273612-10273829,
10274931-10275230,10276834-10277161
Length = 1241
Score = 104 bits (249), Expect = 4e-23
Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 10/117 (8%)
Frame = +1
Query: 124 ADNSVDPPAKKRKLNT----------GEAHSNNSAMANNGARVEDEIDESLYSRQLYVLG 273
A++S D PAKK ++ GEA ++ NG+ V EIDE L+SRQL V G
Sbjct: 127 AESSSDAPAKKARVGASASEAEAMVAGEAGGGGGGVSGNGSEVA-EIDEDLHSRQLAVYG 185
Query: 274 HDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCTVADLSSQFYLSE 444
+ MRR+ +S+VL+SGL GLG EIAKN+ L GVKS+TLHD N + DLS F+LSE
Sbjct: 186 RETMRRLFASNVLVSGLNGLGAEIAKNLALAGVKSITLHDMGNVEMWDLSGNFFLSE 242
>12_01_0038 -
312152-312748,312930-313362,313572-314440,314535-314584,
314589-315192,315674-315718,316100-316317,317020-317332,
318681-318716
Length = 1054
Score = 98.3 bits (234), Expect = 2e-21
Identities = 46/72 (63%), Positives = 58/72 (80%)
Frame = +1
Query: 229 EIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCT 408
EIDE L+SRQL V G + M+R+ +S+VL+SGL GLG EIAKN++L GVKSVTLHDD N
Sbjct: 78 EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLNGLGAEIAKNLVLAGVKSVTLHDDDNVE 137
Query: 409 VADLSSQFYLSE 444
+ DLSS F+L+E
Sbjct: 138 LWDLSSNFFLTE 149
>11_01_0039 -
290960-291086,291615-291714,291809-292013,292466-292513,
295071-295646,295828-296260,296470-297338,297433-298227,
298709-298753,299135-299352,300055-300364,302715-302984
Length = 1331
Score = 96.3 bits (229), Expect = 1e-20
Identities = 45/72 (62%), Positives = 57/72 (79%)
Frame = +1
Query: 229 EIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCT 408
EIDE L+SRQL V G + M+R+ +S+VL+SGL GLG EIAKN++L GVKSV LHDD N
Sbjct: 155 EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLNGLGAEIAKNLVLAGVKSVNLHDDDNVE 214
Query: 409 VADLSSQFYLSE 444
+ DLSS F+L+E
Sbjct: 215 LWDLSSNFFLTE 226
>07_03_1774 +
29425486-29425831,29426018-29426235,29426337-29427131,
29427206-29428074,29428317-29428749,29429263-29429859
Length = 1085
Score = 66.1 bits (154), Expect = 1e-11
Identities = 54/133 (40%), Positives = 67/133 (50%), Gaps = 33/133 (24%)
Frame = +1
Query: 145 PAKKRKLNTGEAHSNNSA---MANNGAR---VEDEIDESLYSRQLYVLGHDAMRRMASSD 306
P KR T + + +A NG+ V EIDE L+SRQL V G + MRR+ +S
Sbjct: 16 PTNKRAAGTDDDRPTDPKRPKVAQNGSTNGVVVPEIDEDLHSRQLAVYGRETMRRLFASH 75
Query: 307 VLISGLGGLGVE-------------------IAKNVIL--------GGVKSVTLHDDKNC 405
VL+SGL GLG E IA N +L GVKSVTLHD KN
Sbjct: 76 VLVSGLNGLGAEIGSSFYPLTLFVLCFFLFQIAFNCLLITTKNLALAGVKSVTLHDVKNV 135
Query: 406 TVADLSSQFYLSE 444
+ DLS+ F+LSE
Sbjct: 136 EMWDLSANFFLSE 148
>11_04_0388 +
17076157-17076254,17076762-17076813,17077672-17077867,
17078242-17078321,17078465-17078581,17078895-17078950,
17079238-17079268,17079292-17079342,17080411-17080477,
17080621-17080724,17080802-17080909,17081874-17081987
Length = 357
Score = 60.9 bits (141), Expect = 5e-10
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Frame = +1
Query: 211 GARVEDEI---DESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSV 381
G E+E+ + +LY RQ+ V G DA +R++ + VL+ G+ G E KN++L GV S+
Sbjct: 4 GGGAEEELTAQETALYDRQIRVWGVDAQKRLSKAHVLVCGMNGTTTEFCKNIVLAGVGSL 63
Query: 382 TLHDDKNCTVADLSSQFYL 438
+L DD T DL++ F +
Sbjct: 64 SLMDDHLVTEDDLNANFLI 82
>03_06_0476 +
34199577-34199638,34200267-34200397,34200535-34200698,
34201007-34201117,34201308-34201387,34201489-34201639,
34201736-34201829,34202421-34202509,34203672-34203745,
34203859-34204021,34204445-34204530,34205011-34205094,
34205186-34205366,34205837-34205887
Length = 506
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 247 YSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHD-DKNC 405
Y RQL + G + + + + G G E KN++LGGV SVT+ D D C
Sbjct: 16 YDRQLRIWGDQGQAALEKASICLLTCGPTGTEAMKNLVLGGVGSVTVVDVDAEC 69
>06_01_1006 +
7836366-7836460,7836568-7836626,7836877-7836961,
7837349-7837496,7837774-7837986,7838403-7838537,
7838659-7838790,7838884-7839099,7839212-7839336,
7839787-7839844,7839977-7840087
Length = 458
Score = 37.1 bits (82), Expect = 0.006
Identities = 17/68 (25%), Positives = 37/68 (54%)
Frame = +1
Query: 220 VEDEIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDK 399
++DE+ +R + G ++ +++ S V++ GLGG+G A ++ GV + L D
Sbjct: 69 LDDEVVSEQLTRNIQFFGMESQKKVTGSFVVVIGLGGVGSHAASMLLRSGVGRLLLVDFD 128
Query: 400 NCTVADLS 423
+++ L+
Sbjct: 129 QVSLSSLN 136
>07_03_0951 - 22836167-22836358,22836455-22837213
Length = 316
Score = 33.5 bits (73), Expect = 0.079
Identities = 27/82 (32%), Positives = 36/82 (43%)
Frame = -2
Query: 347 AISTPKPPRPDIRTSELAIRRIASWPST*SWREYRLSSISSSTRAPLFAIAELFECASPV 168
A+S P P P +S RR SW S R + S+ S T AP +ELF S
Sbjct: 61 ALSPPPTPTPSQPSSSYHRRRRESWESAAGSRHTSIRSVGSDT-AP----SELFPTMSRE 115
Query: 167 FSFRFFAGGSTELSATSALDIG 102
FS A + +A +A + G
Sbjct: 116 FSAMVAAAANANAAAAAAANGG 137
>11_01_0366 + 2793732-2793838,2793944-2794979
Length = 380
Score = 31.1 bits (67), Expect = 0.42
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 256 QLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGG-VKSVTL 387
+L + HD R ++ VL+ G G +GVE+A +++ K VTL
Sbjct: 115 RLQMFEHDKARIASAGSVLVVGGGPIGVELAAEIVMASPEKRVTL 159
>07_01_1060 +
9330217-9330219,9330490-9330561,9330773-9330917,
9331006-9331133,9331689-9331803,9331881-9331984,
9332356-9332568,9332637-9332657
Length = 266
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1
Query: 307 VLISGLGGLGVEIAKNVILGGVK 375
VLI G G +GVEIAK + GVK
Sbjct: 117 VLILGFGAIGVEIAKRIRPFGVK 139
>10_05_0042 +
8481227-8481764,8482291-8482418,8483349-8483933,
8484033-8484061,8485221-8485612,8486038-8486454,
8486587-8486668,8487116-8487686
Length = 913
Score = 27.9 bits (59), Expect = 3.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 30 KQFEENFFLIVNATKILAKLCAF 98
K +EN F IVN +K + +LC F
Sbjct: 676 KSTDENLFTIVNDSKFMRRLCDF 698
>07_01_1064 +
9385330-9385432,9386181-9386236,9386938-9387082,
9387126-9387298,9388058-9388129,9388222-9388336,
9388418-9388521,9388604-9388645,9388932-9389144,
9389621-9389689
Length = 363
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1
Query: 307 VLISGLGGLGVEIAKNVILGGVK 375
VLI G G +GVEIAK + GVK
Sbjct: 184 VLILGFGAIGVEIAKRLRPFGVK 206
>03_05_1051 + 29978655-29979875
Length = 406
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 232 FHLPRALHCSPLPSCSNALLLYL 164
FH R HCSP C N LL L
Sbjct: 156 FHRGRQFHCSPDAQCYNTLLAAL 178
>03_01_0232 + 1824517-1825506
Length = 329
Score = 27.9 bits (59), Expect = 3.9
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = -2
Query: 311 RTSELAIRRIASWPST*SWREYRLSSISSSTRAPLFAIAELFECASPVFSFRFFAGGSTE 132
R S+ + R+AS S+R ++ S S A L CA+ S FFA G
Sbjct: 161 RRSDRDLSRLASTLRDLSYRSSSAAATSDSGEAALAEAVGAATCAAAAASASFFA-GLAS 219
Query: 131 LSATSA 114
SA+SA
Sbjct: 220 ASASSA 225
>09_02_0569 -
10752756-10753164,10753229-10753644,10754149-10755349,
10756770-10756991,10757615-10757767,10757883-10758034,
10758142-10758222,10758353-10758598,10759394-10759516
Length = 1000
Score = 27.5 bits (58), Expect = 5.2
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 386 KVTDFTPPRITFFAISTPKPPRPDIRTS 303
K D PPR A S+P PP P +R S
Sbjct: 11 KPFDVYPPRPLAAAASSPPPPPPPLRVS 38
>06_03_1188 + 28269231-28270358
Length = 375
Score = 27.5 bits (58), Expect = 5.2
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +1
Query: 91 ARSCPM-SSAEVADNSVDPPAKKRKL-NTGE 177
A SC SS EV D++ PPAK+RK+ + GE
Sbjct: 291 AASCKRDSSEEVFDDAPAPPAKRRKVFDAGE 321
>05_05_0305 - 23970692-23970825,23972323-23973703
Length = 504
Score = 27.5 bits (58), Expect = 5.2
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 339 RNSEKRYPWWCKVGNFA*RQKLHRG*SFLAVLPFRD 446
RNSE+R+ + GN A + LHR V FRD
Sbjct: 290 RNSEERHDQKLERGNLALERSLHRKNEIRVVRGFRD 325
>06_01_1057 + 8441881-8442278,8442464-8442548,8442637-8442867
Length = 237
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -2
Query: 197 AELFECASPVFSFRFFAGGSTELSATSALDIGHERAQFCQNFGCVD 60
A + S S R A +TE S TSA D R + + GC D
Sbjct: 84 AATYTSTSASASPRLLATNTTEASLTSATDCASRRIRPLRGRGCAD 129
>05_03_0684 - 16944937-16945959,16946074-16946469,16948055-16948330
Length = 564
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -2
Query: 353 FFAISTPKPPRPDIRTSELAIRRIASWP 270
F A P PP +I T A+R+ WP
Sbjct: 529 FTAFPLPLPPNEEIMTLGQALRKCIQWP 556
>02_03_0239 + 16738066-16738272
Length = 68
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 268 LGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGV 372
LGH+ + R + ++G GGL + K ++G V
Sbjct: 3 LGHEGLSRRRGGEAEVAGCGGLVGALEKRPVMGVV 37
>11_01_0346 - 2589111-2589220,2589613-2589852,2589956-2590028,
2590301-2590606,2590698-2590912,2591461-2591755,
2591901-2592065,2592142-2592738,2593029-2593115,
2593203-2593523,2594047-2596071
Length = 1477
Score = 26.6 bits (56), Expect = 9.1
Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
Frame = +1
Query: 16 TNVALNNLKKISS*LSTQPKFWQNCARSCPMSSAEVADNSV-DPPAKKRKLNTGEAHSNN 192
T + L++L+ + P +Q R + +D + + K + L T + +
Sbjct: 1295 TTIGLHDLRSCLGIIPQDPTLFQGTVRYNLDPLGQFSDQQIWEVLDKCQLLETVQEKEHG 1354
Query: 193 SAMANNGARVEDEIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGV 372
G VED + S+ RQL+ LG +RR +L+ ++ A + IL
Sbjct: 1355 LDSLGRGV-VEDGSNWSMGQRQLFCLGRALLRRCR---ILVLDEATASIDNATDAIL--- 1407
Query: 373 KSVTLHDDKNCTV 411
+ + K+CTV
Sbjct: 1408 QKTIRTEFKDCTV 1420
>07_03_0476 - 18547223-18548187,18548743-18549958
Length = 726
Score = 26.6 bits (56), Expect = 9.1
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = -2
Query: 368 PPRITFFAISTPKPPRPDIRTSELAIRRIASWPST*SWREYRLSSISSSTRAPLFAIA 195
PP+ A S P P PD RT LA I PS +R++ ++ PL + A
Sbjct: 175 PPQDEAAAASPPPPRCPDSRTGCLASLTIKLLPSA---NAFRVTDFATEHNHPLASAA 229
>06_03_0160 + 17366392-17367525,17367856-17368206
Length = 494
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 76 FWQNCARSCPMSSAEVADNSVD 141
FW+N R CP ++A N VD
Sbjct: 348 FWKNGNRDCPPELLQLAQNFVD 369
>01_06_1631 - 38760452-38760466,38760696-38760788,38760838-38761539
Length = 269
Score = 26.6 bits (56), Expect = 9.1
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 229 EIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLG-VEIAKNVILGG 369
E+D+ S +V+G+ RM SSD L +GLGG +E+A ++ L G
Sbjct: 44 EVDKIFQSIAEFVVGNGKKPRMQSSD-LRTGLGGQHCLEMAHSLDLCG 90
>01_06_0893 - 32766994-32768841,32769596-32769782,32769860-32769987,
32770080-32770283,32770373-32770523,32771424-32771533,
32772534-32772903,32773031-32773189,32773719-32773848,
32773921-32773989,32774066-32774154,32774319-32774439,
32775878-32776148
Length = 1278
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 22 VALNNLKKISS*LSTQPKFWQNCARSCPMSSAEVADNSVDPP 147
+ +NL S+ L F QN A S P+SS A +++ PP
Sbjct: 982 IGKSNLDTASASLDHSTSFGQNVALSQPLSSYASAASAMVPP 1023
>01_01_1191 + 9487835-9488467,9492584-9492787
Length = 278
Score = 26.6 bits (56), Expect = 9.1
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 193 SAMANNGARVEDEID--ESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILG 366
+A N RV E+ E+ + ++ + + VL+ G G G+EIA ++ +G
Sbjct: 141 AAAGENDERVVPEVPGMETFPGKVVHAADYRSAEGFKGKSVLVVGGGNSGMEIAYDLAVG 200
Query: 367 G 369
G
Sbjct: 201 G 201
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,975,348
Number of Sequences: 37544
Number of extensions: 279103
Number of successful extensions: 1022
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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