Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14d11
(447 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p... 94 5e-20
Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p... 93 1e-19
U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membran... 46 2e-05
U13875-1|AAA21162.2| 541|Caenorhabditis elegans Yeast ula (ubiq... 44 7e-05
Z72502-6|CAA96591.1| 343|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical pr... 36 0.010
AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical ... 36 0.018
Z82096-6|CAD98732.2| 124|Caenorhabditis elegans Hypothetical pr... 32 0.17
U60979-2|AAC47278.1| 119|Caenorhabditis elegans CES-2 region pi... 32 0.17
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 31 0.50
AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylat... 30 0.67
U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical p... 30 0.88
Z74038-8|CAD21642.1| 540|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z72507-16|CAC35887.1| 540|Caenorhabditis elegans Hypothetical p... 29 1.2
AF047661-1|AAK71388.2| 915|Caenorhabditis elegans Hypothetical ... 29 1.2
Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear recep... 29 2.0
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z81484-4|CAE17763.1| 191|Caenorhabditis elegans Hypothetical pr... 28 3.6
U41017-5|AAC48216.2| 495|Caenorhabditis elegans C.elegans homeo... 28 3.6
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 28 3.6
AJ427855-1|CAD20808.1| 495|Caenorhabditis elegans CEH-21 protei... 28 3.6
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 28 3.6
AF023470-1|AAB86814.1| 183|Caenorhabditis elegans CEH-21 protein. 28 3.6
Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical p... 27 4.7
Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical pr... 27 4.7
AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical ... 27 4.7
AF100306-1|AAC68921.1| 423|Caenorhabditis elegans Hypothetical ... 27 4.7
AF016659-1|AAB66047.3| 1251|Caenorhabditis elegans Hypothetical ... 27 4.7
AC024882-13|AAF60926.1| 342|Caenorhabditis elegans Seven tm rec... 27 4.7
Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 27 6.2
U55365-5|AAN84867.2| 350|Caenorhabditis elegans Serpentine rece... 27 6.2
U41543-11|AAP40530.1| 362|Caenorhabditis elegans Hypothetical p... 27 6.2
U41543-9|AAB37021.2| 453|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL132951-2|CAC44305.1| 561|Caenorhabditis elegans Hypothetical ... 27 6.2
>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
protein C47E12.5a protein.
Length = 1113
Score = 93.9 bits (223), Expect = 5e-20
Identities = 44/91 (48%), Positives = 63/91 (69%)
Frame = +1
Query: 172 GEAHSNNSAMANNGARVEDEIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAK 351
GE ++ G ++ +D++LYSRQ+Y LG AM + ++ VLISGLG +GVEIAK
Sbjct: 83 GEKMDTSNNAGGVGGNSDELLDKNLYSRQIYTLGESAMVNLRTASVLISGLGSVGVEIAK 142
Query: 352 NVILGGVKSVTLHDDKNCTVADLSSQFYLSE 444
N+ILGGV+ VT+HD K +DLS+Q+YL +
Sbjct: 143 NLILGGVRHVTIHDTKLAKWSDLSAQYYLRD 173
>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
protein C47E12.5b protein.
Length = 1028
Score = 92.7 bits (220), Expect = 1e-19
Identities = 45/87 (51%), Positives = 63/87 (72%)
Frame = +1
Query: 184 SNNSAMANNGARVEDEIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVIL 363
SNN+ G ++ +D++LYSRQ+Y LG AM + ++ VLISGLG +GVEIAKN+IL
Sbjct: 4 SNNAGGV--GGNSDELLDKNLYSRQIYTLGESAMVNLRTASVLISGLGSVGVEIAKNLIL 61
Query: 364 GGVKSVTLHDDKNCTVADLSSQFYLSE 444
GGV+ VT+HD K +DLS+Q+YL +
Sbjct: 62 GGVRHVTIHDTKLAKWSDLSAQYYLRD 88
>U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membrane
ruffles in embryoprotein 1 protein.
Length = 430
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +1
Query: 238 ESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCTVAD 417
+S Y +V G + + ++ +L+ G GGLG E+ KN+ L G +++ + D V++
Sbjct: 22 DSAYKVPWFVPGPENFEALQNTKILVIGAGGLGCELLKNLALSGFRTIEVIDMDTIDVSN 81
Query: 418 LSSQFYLSET 447
L+ QF E+
Sbjct: 82 LNRQFLFRES 91
>U13875-1|AAA21162.2| 541|Caenorhabditis elegans Yeast ula
(ubiquitin activating)homolog protein 1 protein.
Length = 541
Score = 43.6 bits (98), Expect = 7e-05
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +1
Query: 247 YSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCTVADLSS 426
Y RQ+ + G + + S+ + G L EI K+++L GV+S + DD AD+
Sbjct: 10 YDRQVRLWGEEGQASIGSTSACVLGSDSLATEILKSLVLAGVQSFYVVDDAKVEQADIGQ 69
Query: 427 QFYL 438
F+L
Sbjct: 70 NFFL 73
>Z72502-6|CAA96591.1| 343|Caenorhabditis elegans Hypothetical
protein C08B6.9 protein.
Length = 343
Score = 42.7 bits (96), Expect = 1e-04
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +1
Query: 235 DESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCTVA 414
++++Y RQ+ + G +A ++ +S VLI G LG E+AK + L GV + L D +
Sbjct: 7 EQAIYDRQIRLWGMEAQNKIRNSKVLIIGGKQLGAEVAKTLSLAGVDEMHLVDHRLVDTE 66
Query: 415 DLSSQF 432
++ F
Sbjct: 67 EIGMNF 72
>Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical
protein W02A11.4 protein.
Length = 582
Score = 36.3 bits (80), Expect = 0.010
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +1
Query: 289 RMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCTVADLSSQF 432
++ S +L+ G GG+G E+ KN+ + G + V + D +++L+ QF
Sbjct: 10 KIVQSKILVIGAGGIGCELLKNLAVTGFRKVHVIDLDTIDISNLNRQF 57
>AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical
protein F42G8.6 protein.
Length = 402
Score = 35.5 bits (78), Expect = 0.018
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 235 DESLYSRQLYV--LGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCT 408
D YSRQL V G + + + +VLI G GGLG +A + G+ ++ + D + +
Sbjct: 14 DAGRYSRQLLVDDFGVSGQKNLKNLNVLIVGAGGLGCPVATYLGAAGIGTIGIVDYDHIS 73
Query: 409 VADLSSQFYLSE 444
+ +L Q E
Sbjct: 74 LDNLHRQVAYKE 85
>Z82096-6|CAD98732.2| 124|Caenorhabditis elegans Hypothetical
protein ZK909.6 protein.
Length = 124
Score = 32.3 bits (70), Expect = 0.17
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 85 NCARSCPMS-SAEVADNSVDPPAKKRKLNTGEAHSNNSAMANNGARVEDEIDESLY 249
N +SC +AE ++ PP+ L T A S N NG V+D ++ +Y
Sbjct: 63 NIRKSCVQKQNAEKSEEETSPPSSDADLPTSLADSFNDTTPYNGTIVDDRMEVKIY 118
>U60979-2|AAC47278.1| 119|Caenorhabditis elegans CES-2 region
pioneer protein.
Length = 119
Score = 32.3 bits (70), Expect = 0.17
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 85 NCARSCPMS-SAEVADNSVDPPAKKRKLNTGEAHSNNSAMANNGARVEDEIDESLY 249
N +SC +AE ++ PP+ L T A S N NG V+D ++ +Y
Sbjct: 58 NIRKSCVQKQNAEKSEEETSPPSSDADLPTSLADSFNDTTPYNGTIVDDRMEVKIY 113
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily
assigned gene nameprotein 162 protein.
Length = 2643
Score = 30.7 bits (66), Expect = 0.50
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 137 LTPRRKSGN*IQEKRIRTTRQWRTMERAWKMKSTRVCTRA 256
+TP+RK GN + +I +R E AWK K +C A
Sbjct: 517 VTPQRKQGN--ENIQILEVLHFRRNEHAWKNKGKNICKAA 554
>AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylating
with usp/ubp andotu domains protein 2 protein.
Length = 551
Score = 30.3 bits (65), Expect = 0.67
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +1
Query: 145 PAKKRKLNTGEAHSNNSAMANNGARVEDEIDESLYSRQLYVLGHDAMRRMASSDVLISGL 324
P + +LN +AHSNNS + + GA E+ + E + +R+ L D MA D + G+
Sbjct: 237 PVECSELNKNDAHSNNSRL-HIGAD-EEVVQEDVTARK--QLFFDVFSNMADFDNTLVGM 292
Query: 325 G 327
G
Sbjct: 293 G 293
>U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical
protein T03F1.1 protein.
Length = 419
Score = 29.9 bits (64), Expect = 0.88
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +1
Query: 232 IDESLYSRQLYV--LGH-DAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKN 402
+D + YSR + + +G + R+ V + G+GG+G +A+ + G+ + L D
Sbjct: 59 VDSNPYSRLMALQRMGIVNEYERIREKTVAVVGVGGVGSVVAEMLTRCGIGKLILFDYDK 118
Query: 403 CTVADLSSQFY 435
+A+++ FY
Sbjct: 119 VEIANMNRLFY 129
>Z74038-8|CAD21642.1| 540|Caenorhabditis elegans Hypothetical
protein F17C11.12 protein.
Length = 540
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -2
Query: 230 SSSTRAPLFAIAELFECASPVFSFRFFAGGSTELSATSALDIGHERAQFCQNFGCV 63
+++T + L I L CA + + S EL T+ I + AQ C FG V
Sbjct: 417 TTATFSVLIRIGVLLSCAMTSQAIIVASIASNELMPTAIRSISYSTAQLCSRFGIV 472
>Z72507-16|CAC35887.1| 540|Caenorhabditis elegans Hypothetical
protein F17C11.12 protein.
Length = 540
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -2
Query: 230 SSSTRAPLFAIAELFECASPVFSFRFFAGGSTELSATSALDIGHERAQFCQNFGCV 63
+++T + L I L CA + + S EL T+ I + AQ C FG V
Sbjct: 417 TTATFSVLIRIGVLLSCAMTSQAIIVASIASNELMPTAIRSISYSTAQLCSRFGIV 472
>AF047661-1|AAK71388.2| 915|Caenorhabditis elegans Hypothetical
protein M70.3a protein.
Length = 915
Score = 29.5 bits (63), Expect = 1.2
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = -3
Query: 250 STDSRRFHLPRALHCSPLPSCSNALLLYLVSAFSPGGQRNYRRLQH*TSGTNAHNFAR 77
S+ S F S + SNA + + S SP Q + H T +NAHN R
Sbjct: 20 SSGSAPFKQSETAKTSDFTAFSNAHNIIIASGSSPSKQSETAKTSHFTDFSNAHNVIR 77
>Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical
protein C45G3.1 protein.
Length = 1186
Score = 28.7 bits (61), Expect = 2.0
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = -2
Query: 317 DIRTSELAIRRIASWPST*SWREYRLSSISSSTR-APLFAIAELFECASPVFSFRFFAGG 141
D+R +E A + S P++ + R SISSS +P+ + E + + + +
Sbjct: 36 DLRATERAF--LESSPTSMNMRTPLNPSISSSVSDSPILSYDE--KANKQIIALATWCNT 91
Query: 140 STELSATSALDIGHERAQFCQN 75
EL + +D+G +A+ C+N
Sbjct: 92 MMELDVSEEMDLGESKAEACRN 113
>Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical
protein F54D1.4 protein.
Length = 536
Score = 28.7 bits (61), Expect = 2.0
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -2
Query: 374 FTPPRITFFAISTPKPPRPDIRTSELAIRRIASWPST*S--WREYRLSSISSSTRAPLFA 201
F+PP ++ IS P PP+ T + +S+P+ S YR +S+SS + PL
Sbjct: 421 FSPPSLSPCQISAPPPPQQQY-TDYSQMPSTSSYPANSSPFQSPYRPNSLSSFPKIPLEM 479
Query: 200 IAELFECASP 171
+ E P
Sbjct: 480 TKSIEEFLRP 489
>AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear receptor
NHR-7 protein.
Length = 536
Score = 28.7 bits (61), Expect = 2.0
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -2
Query: 374 FTPPRITFFAISTPKPPRPDIRTSELAIRRIASWPST*S--WREYRLSSISSSTRAPLFA 201
F+PP ++ IS P PP+ T + +S+P+ S YR +S+SS + PL
Sbjct: 421 FSPPSLSPCQISAPPPPQQQY-TDYSQMPSTSSYPANSSPFQSPYRPNSLSSFPKIPLEM 479
Query: 200 IAELFECASP 171
+ E P
Sbjct: 480 TKSIEEFLRP 489
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 28.3 bits (60), Expect = 2.7
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 226 DEIDESLYSRQLYVLGHD--AMRRMASSDVLISGLGGLGVEIAKNVIL--GGVKSVTLHD 393
D++ SL ++ VL D +RR +S +L+SG GLG ++ G ++ ++
Sbjct: 304 DDLLASLGEKEREVLHMDNGKIRRPSSKMLLLSGPAGLGKSTLARIVARQAGYSTIDVNA 363
Query: 394 DKNCTVADLS 423
TVADL+
Sbjct: 364 SDARTVADLN 373
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 144 PGEKAETKYRRSAFEQLGNGEQW 212
PG KAE+K+R+ F + NG +W
Sbjct: 1141 PGNKAESKFRQ--FNKFENGNEW 1161
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 144 PGEKAETKYRRSAFEQLGNGEQW 212
PG KAE+K+R+ F + NG +W
Sbjct: 1141 PGNKAESKFRQ--FNKFENGNEW 1161
>Z81484-4|CAE17763.1| 191|Caenorhabditis elegans Hypothetical
protein C47A10.12 protein.
Length = 191
Score = 27.9 bits (59), Expect = 3.6
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = -3
Query: 217 ALHCSPLPSCSNALLLYLVSAFSPGGQRNYRRLQH*TSGTNAHNFARILVALTIKKKFSS 38
AL+C+PL SC +++S + GQ N ++Q SGT A V +I++ +
Sbjct: 54 ALYCAPLYSCKEDKHNWIMSGEATWGQWNI-QIQWCPSGTTA-------VGYSIRRSNNH 105
Query: 37 NCLKQ 23
+C+ Q
Sbjct: 106 SCIAQ 110
>U41017-5|AAC48216.2| 495|Caenorhabditis elegans C.elegans homeobox
protein 21 protein.
Length = 495
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 154 KRKLNTGEAHSNNSAMANNGARVEDEIDE 240
+R+L + S +S NGA EDE+DE
Sbjct: 443 RRRLRIDQQISRSSRSTGNGADTEDELDE 471
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 144 PGEKAETKYRRSAFEQLGNGEQW 212
PG KAE+K+R+ F + NG +W
Sbjct: 1141 PGNKAESKFRQ--FNKFENGNEW 1161
>AJ427855-1|CAD20808.1| 495|Caenorhabditis elegans CEH-21 protein
protein.
Length = 495
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 154 KRKLNTGEAHSNNSAMANNGARVEDEIDE 240
+R+L + S +S NGA EDE+DE
Sbjct: 443 RRRLRIDQQISRSSRSTGNGADTEDELDE 471
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 144 PGEKAETKYRRSAFEQLGNGEQW 212
PG KAE+K+R+ F + NG +W
Sbjct: 1141 PGNKAESKFRQ--FNKFENGNEW 1161
>AF023470-1|AAB86814.1| 183|Caenorhabditis elegans CEH-21 protein.
Length = 183
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 154 KRKLNTGEAHSNNSAMANNGARVEDEIDE 240
+R+L + S +S NGA EDE+DE
Sbjct: 131 RRRLRIDQQISRSSRSTGNGADTEDELDE 159
>Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 27.5 bits (58), Expect = 4.7
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 283 MRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCTVA 414
+ R + VLI G G LG IA+ +I GV+ ++ D N TV+
Sbjct: 319 LERYSQLKVLILGAGTLGCNIARCLIGWGVRHISFLD--NSTVS 360
>Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical
protein F59F3.5 protein.
Length = 1199
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 143 PRRKSGN*IQEKRIRTTRQWRTMERAWKMKSTRVCTRASSTC 268
P+R+ E IRT+ +W+ E + +K+ R C S C
Sbjct: 66 PKREEHAGFPEIGIRTSAEWKKNEYWFLLKNVRQCDTGSYYC 107
>AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 27.5 bits (58), Expect = 4.7
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 283 MRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCTVA 414
+ R + VLI G G LG IA+ +I GV+ ++ D N TV+
Sbjct: 319 LERYSQLKVLILGAGTLGCNIARCLIGWGVRHISFLD--NSTVS 360
>AF100306-1|AAC68921.1| 423|Caenorhabditis elegans Hypothetical
protein T24C4.2 protein.
Length = 423
Score = 27.5 bits (58), Expect = 4.7
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 103 PMSSAEVADNSV-DPPAKKRKLNTGEAHSNNSAMANNGARVEDEIDESLY 249
P+ E +D +V +P AKK K + G+A + S + + E DE++Y
Sbjct: 4 PVLKNEDSDLAVREPAAKKSKKSNGKAQAVKSESSESMFMTEATTDENIY 53
>AF016659-1|AAB66047.3| 1251|Caenorhabditis elegans Hypothetical
protein F40E12.2 protein.
Length = 1251
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 297 RHSTHSVVAQHVELARVQTLVDFIFHARSIVRH 199
+HS + + + + TLVDF F A IVRH
Sbjct: 1115 KHSDSKIEKKWQSMHAMYTLVDFSFLAECIVRH 1147
>AC024882-13|AAF60926.1| 342|Caenorhabditis elegans Seven tm
receptor protein 164 protein.
Length = 342
Score = 27.5 bits (58), Expect = 4.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 190 CSNALLLYLVSAFSPGGQRNYRRL 119
C N+LL+YL+ SP NYR L
Sbjct: 21 CLNSLLIYLILTKSPKKMGNYRYL 44
>Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3
Query: 250 STDSRRFHLPRALHCSPLPSCSNALLLYLVSAFSPGGQ 137
ST ++ H+ R + S +C +LY V GGQ
Sbjct: 113 STAAQSHHIQRTVQPSKCSACDTLSILYTVQCIDCGGQ 150
>Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3
Query: 250 STDSRRFHLPRALHCSPLPSCSNALLLYLVSAFSPGGQ 137
ST ++ H+ R + S +C +LY V GGQ
Sbjct: 342 STAAQSHHIQRTVQPSKCSACDTLSILYTVQCIDCGGQ 379
>Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3
Query: 250 STDSRRFHLPRALHCSPLPSCSNALLLYLVSAFSPGGQ 137
ST ++ H+ R + S +C +LY V GGQ
Sbjct: 113 STAAQSHHIQRTVQPSKCSACDTLSILYTVQCIDCGGQ 150
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3
Query: 250 STDSRRFHLPRALHCSPLPSCSNALLLYLVSAFSPGGQ 137
ST ++ H+ R + S +C +LY V GGQ
Sbjct: 342 STAAQSHHIQRTVQPSKCSACDTLSILYTVQCIDCGGQ 379
>U55365-5|AAN84867.2| 350|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 11 protein.
Length = 350
Score = 27.1 bits (57), Expect = 6.2
Identities = 18/82 (21%), Positives = 36/82 (43%)
Frame = +1
Query: 169 TGEAHSNNSAMANNGARVEDEIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIA 348
TG N N + + + Q Y + + +R + +++I +G + V +
Sbjct: 183 TGYLKHYNKVQYNKNHAILSSVITTYSLTQRYQITEN-IRILRMLNLIIFYMGFMNVVLV 241
Query: 349 KNVILGGVKSVTLHDDKNCTVA 414
+V+L G+K +T C+VA
Sbjct: 242 LSVMLSGLKEITPEQQAICSVA 263
>U41543-11|AAP40530.1| 362|Caenorhabditis elegans Hypothetical
protein F46H5.2b protein.
Length = 362
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +1
Query: 103 PMSSAEVADNSVDPPAKK---RKLNTGEAHSNNSAMANNGARVEDEI 234
P+SS V D + P+ K K + + M++NG V+D++
Sbjct: 296 PLSSVSVGDQEENSPSVKDAEEKTTDNDEEMQDVEMSDNGTEVDDDL 342
>U41543-9|AAB37021.2| 453|Caenorhabditis elegans Hypothetical
protein F46H5.2a protein.
Length = 453
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +1
Query: 103 PMSSAEVADNSVDPPAKK---RKLNTGEAHSNNSAMANNGARVEDEI 234
P+SS V D + P+ K K + + M++NG V+D++
Sbjct: 387 PLSSVSVGDQEENSPSVKDAEEKTTDNDEEMQDVEMSDNGTEVDDDL 433
>AL132951-2|CAC44305.1| 561|Caenorhabditis elegans Hypothetical
protein Y67H2A.4a protein.
Length = 561
Score = 27.1 bits (57), Expect = 6.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1
Query: 378 RLYTTKDNVFRYFDT 334
RLY+T D +FRYF T
Sbjct: 200 RLYSTPDKIFRYFAT 214
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,793,953
Number of Sequences: 27780
Number of extensions: 224397
Number of successful extensions: 881
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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