Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14d09
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   2.8  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   3.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.4  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 188 IVAGYDWENGTDYNKILDSYANSGFQATNFGKTIVEINNMLK 313
           I++G  +   T + +IL    NSG+  T FG  I   N+ ++
Sbjct: 237 IISGSIFMTTTSFYRIL----NSGYNLTTFGSFIFNANSAIE 274


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -1

Query: 624 LSXGTNKLPILFIPRVLNTFPLKLKSPT*VGAMHFIKSSS 505
           L+ GTN+   L +    N   +++ +PT  GA H +++ S
Sbjct: 147 LNWGTNESYNLDLTTTGNQIGVQISAPTIFGARHGLETLS 186


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 17/75 (22%), Positives = 28/75 (37%)
 Frame = +2

Query: 176 AETPIVAGYDWENGTDYNKILDSYANSGFQATNFGKTIVEINNMLKSRAVPLTEENSDCY 355
           A   + AG+DW        I  S  +   QA  +G      + +L S  +     +    
Sbjct: 74  ARLAVEAGFDWVYYESRAHIHCSVKSESSQAAKYGGCFSGESTVLTSTGLRRNLSSLQIG 133

Query: 356 EEDQFIKKKTNCTIF 400
           E+ Q +   TN  +F
Sbjct: 134 EKIQALDPSTNELVF 148


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 104 VEKPVKVAPNIAVNAVLQPSQDL 172
           +EKP KV PN   +  + P   L
Sbjct: 99  IEKPRKVLPNFKTDEPICPDGKL 121


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 31  LIYIRVLWIIDLENNKN 81
           LI ++++WI+ L  N+N
Sbjct: 443 LIALKLVWIVALFKNEN 459


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 13  IFSIGTLIYIRVLWIIDLEN 72
           + ++  L+YI  +WI  L N
Sbjct: 723 MIAVSGLVYIATVWICTLMN 742


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,344
Number of Sequences: 336
Number of extensions: 3309
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)