Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14d09
         (627 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    25   2.6  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    23   7.9  

>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
 Frame = -2

Query: 275 NSWPEI-----RS*RKNRVFYCNQFHF----PSRSPRLSVFLQVNLGSVAEPHLRQYLGL 123
           N WP+I     ++ R++R    N   F    P+R  R++ + ++    VA      YLG 
Sbjct: 146 NRWPQIVAQIYQNTRRDRQHIANLLEFIRIVPARDDRVAFYHELKKHMVASKDYESYLGA 205

Query: 122 L 120
           L
Sbjct: 206 L 206


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/39 (28%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = -1

Query: 495 AVVTITSTSLFLTKKQIVSLSPEDIMLEVYP-RNIVQLV 382
           ++ T+ +TS+F++   I +++ +   + VYP R+ +QL+
Sbjct: 118 SIGTLQATSIFVSTISITAIALDRYQVIVYPTRDSLQLM 156


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,255
Number of Sequences: 2352
Number of extensions: 13262
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)