Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14d05
(501 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ370039-1|ABD18600.1| 168|Anopheles gambiae putative TIL domai... 30 0.038
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 29 0.12
AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase ... 28 0.21
Y17700-1|CAA76820.1| 122|Anopheles gambiae hypothetical protein... 27 0.47
AY330174-1|AAQ16280.1| 178|Anopheles gambiae odorant-binding pr... 27 0.47
AJ618918-1|CAF01997.1| 228|Anopheles gambiae putative odorant-b... 27 0.47
AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 25 1.4
CR954257-5|CAJ14156.1| 227|Anopheles gambiae predicted protein ... 25 1.9
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 25 1.9
AY994094-1|AAX86007.1| 41|Anopheles gambiae metallothionein 2 ... 24 3.3
AY994093-1|AAX86006.1| 45|Anopheles gambiae metallothionein 1 ... 24 3.3
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 24 3.3
DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domai... 23 4.4
CR954257-7|CAJ14158.1| 284|Anopheles gambiae signal sequence re... 23 4.4
DQ370036-1|ABD18597.1| 103|Anopheles gambiae putative TIL domai... 23 5.8
DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 23 7.7
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 23 7.7
>DQ370039-1|ABD18600.1| 168|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 168
Score = 30.3 bits (65), Expect = 0.038
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 339 CKTGWIYEAKTDSCVPKCTS 398
CK G++ E+K C+PKC++
Sbjct: 72 CKPGFVRESKEGKCIPKCSN 91
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 28.7 bits (61), Expect = 0.12
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3
Query: 238 RCLMTGTSTVATPFPSFMASQNNDRSPMTNNRTDK 134
+ L G++ V + PSF+ + + +P T NRT+K
Sbjct: 338 KALSDGSAAVGSTIPSFLNVIDTNEAPPTYNRTNK 372
>AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase
protein.
Length = 808
Score = 27.9 bits (59), Expect = 0.21
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 232 LMTGTSTVATPFPSFMASQNNDRSPMTNNRTDK 134
L+ G++ V + PSF+ D P T N+T+K
Sbjct: 332 LVNGSAAVGSAVPSFLNIIATDEDPPTYNKTNK 364
>Y17700-1|CAA76820.1| 122|Anopheles gambiae hypothetical protein
protein.
Length = 122
Score = 26.6 bits (56), Expect = 0.47
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 252 YNKKRCRGKTNSGSCVITESYVSI-EKSQSCK 344
+N+K C G T +CV++E + E Q C+
Sbjct: 47 WNEKECNGSTKLAACVVSEHEQAYRELKQRCQ 78
>AY330174-1|AAQ16280.1| 178|Anopheles gambiae odorant-binding
protein AgamOBP47 protein.
Length = 178
Score = 26.6 bits (56), Expect = 0.47
Identities = 11/46 (23%), Positives = 17/46 (36%)
Frame = +3
Query: 282 NSGSCVITESYVSIEKSQSCKTGWIYEAKTDSCVPKCTSGCVNGTC 419
N+ C +T V +C + WI + K + GC C
Sbjct: 19 NAAECCVTPFLVEPSAFMTCHSKWIGQTKRQMAMEGIPRGCCVAEC 64
>AJ618918-1|CAF01997.1| 228|Anopheles gambiae putative
odorant-binding protein OBPjj2 protein.
Length = 228
Score = 26.6 bits (56), Expect = 0.47
Identities = 11/46 (23%), Positives = 17/46 (36%)
Frame = +3
Query: 282 NSGSCVITESYVSIEKSQSCKTGWIYEAKTDSCVPKCTSGCVNGTC 419
N+ C +T V +C + WI + K + GC C
Sbjct: 69 NAAECCVTPFLVEPSAFMTCHSKWIGQTKRQMAMEGIPRGCCVAEC 114
>AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein
protein.
Length = 468
Score = 25.0 bits (52), Expect = 1.4
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +3
Query: 378 CVPKCTSGCVNGTCEAPEVC-TCPEPLVLRRGHCVE 482
C+ TSG + TCEA C +C P + CV+
Sbjct: 429 CIRCGTSGHLAATCEAEVRCASCAGPHRMGSAQCVQ 464
>CR954257-5|CAJ14156.1| 227|Anopheles gambiae predicted protein
protein.
Length = 227
Score = 24.6 bits (51), Expect = 1.9
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +3
Query: 339 CKTGWIYEAKTDSCVPKCTSG 401
C+ G++Y DSC P G
Sbjct: 84 CRPGYVYSPPQDSCYPLFQQG 104
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 24.6 bits (51), Expect = 1.9
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 415 LARRPRCAPVQSLWSSDADTAWSPRVHQP 501
L P P+ W +D SP+++QP
Sbjct: 82 LPHTPTNQPIVPFWQADLKPELSPKLYQP 110
>AY994094-1|AAX86007.1| 41|Anopheles gambiae metallothionein 2
protein.
Length = 41
Score = 23.8 bits (49), Expect = 3.3
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +3
Query: 387 KCTSGCVNGTCEAPEVCTCPEPLVLRRGHC 476
KCTS C CTCP + G C
Sbjct: 11 KCTSPNCGAGCGCESRCTCPCKDGAKEGCC 40
>AY994093-1|AAX86006.1| 45|Anopheles gambiae metallothionein 1
protein.
Length = 45
Score = 23.8 bits (49), Expect = 3.3
Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
Frame = +3
Query: 387 KCTSGCVNG-TCEAPEVCTC 443
KCTSGC +G C C C
Sbjct: 11 KCTSGCGSGQPCATDCKCAC 30
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.8 bits (49), Expect = 3.3
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2
Query: 182 CHKRWERSCHR 214
C K+W R CHR
Sbjct: 786 CRKQWLRRCHR 796
>DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domain
protein protein.
Length = 285
Score = 23.4 bits (48), Expect = 4.4
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Frame = +3
Query: 339 CKTGWIYEAKTDSCVPKCTSGCVNGT-CEA--PEVCTCPEPLVLRR--GHCV 479
CK G++ E + +CVP T+ T C A C C + V + G C+
Sbjct: 60 CKKGFVRETQFGNCVPVDTTYNPTTTKCAAGFTSGCVCKKGFVRKTEFGKCI 111
>CR954257-7|CAJ14158.1| 284|Anopheles gambiae signal sequence
receptor protein.
Length = 284
Score = 23.4 bits (48), Expect = 4.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 254 VDQTSALPYDRYVHGGNSFPIFYGITKQ*SFA 159
+ SA+PY+R V G+ + Y SFA
Sbjct: 126 IQNFSAVPYNREVKPGHEATVAYSFLPTESFA 157
>DQ370036-1|ABD18597.1| 103|Anopheles gambiae putative TIL domain
protein protein.
Length = 103
Score = 23.0 bits (47), Expect = 5.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 468 GHCVEPTCS 494
G CVEPTCS
Sbjct: 48 GPCVEPTCS 56
>DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein.
Length = 847
Score = 22.6 bits (46), Expect = 7.7
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 466 ADTAWSPRVHQP 501
A + W+PR HQP
Sbjct: 510 AASEWNPRAHQP 521
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 22.6 bits (46), Expect = 7.7
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -3
Query: 469 PRLRTRGSGQVHTSGASQVPFTHPLVHFGTQLS 371
P LRT G+ H S F H +G +L+
Sbjct: 452 PLLRTLDLGENHISNIDNASFRHMAHLYGLRLT 484
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,817
Number of Sequences: 2352
Number of extensions: 11457
Number of successful extensions: 34
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -