Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14d05
(501 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 36 0.017
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 35 0.038
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 35 0.038
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 34 0.050
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 33 0.12
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 33 0.12
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 33 0.12
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 33 0.12
U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile (un... 31 0.36
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 31 0.47
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 30 0.82
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 30 1.1
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 30 1.1
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 29 2.5
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 28 3.3
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 28 3.3
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 28 4.4
U80836-9|AAB37895.1| 303|Caenorhabditis elegans Hypothetical pr... 28 4.4
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 28 4.4
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 28 4.4
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 28 4.4
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 27 5.8
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 27 5.8
U41994-7|AAY55868.1| 155|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical p... 27 7.6
U58756-8|AAY44005.1| 183|Caenorhabditis elegans Hypothetical pr... 27 7.6
AC024863-2|AAP31420.1| 366|Caenorhabditis elegans Prion-like-(q... 27 7.6
AC024863-1|AAF60877.1| 481|Caenorhabditis elegans Prion-like-(q... 27 7.6
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.017
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 330 SQSCKTGWIYEAKTDSCVPKCTSGCVNGTCEAPEVCTCPE--PLVLRRGHCVEPTCSP 497
SQSC + + ++CVP C C + +A TC P + + +C+ P C P
Sbjct: 183 SQSCIQKYEITVEQETCVPACMPACSSACVQAVTCSTCTNNCPSICSQANCI-PQCMP 239
Score = 31.5 bits (68), Expect = 0.36
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 10/114 (8%)
Frame = +3
Query: 150 FVIGERSLFCDAIKDGKGVATVDVPVIRQRTRL---VYNKKRCRGKTNSGSCVI--TESY 314
++I ++F ++ D + + P ++ L V +K++C SG+C +
Sbjct: 3 YLIAAFAVFQLSLGDEFSTSALTSPYLKMNGSLITRVRSKRQCCAMCPSGNCGCGSCSGF 62
Query: 315 VSI-EKSQSCKTGWIYEAKT----DSCVPKCTSGCVNGTCEAPEVCTCPEPLVL 461
V+ ++ Q T AKT D C+PKC S C+N P PL L
Sbjct: 63 VTCPDRCQPMCTQACVMAKTSVCVDQCMPKCDSACINLVRSGPSCDQQCMPLCL 116
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 375 SCVPKCTSGCVNGTCEAPEVC 437
+C+P CTS CV C P+ C
Sbjct: 309 ACMPSCTSSCVQSMC--PQQC 327
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 34.7 bits (76), Expect = 0.038
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 252 YNKKRCRGKTNSGSCVITESYVSIEKSQSCKTGWIYEAKTDSCVPKCTSGCVN-GTCEAP 428
Y+ KRC + + + E S + C GW E D P C GC N G C AP
Sbjct: 136 YHGKRCNRYCIANAKLHWEC--STHGVRRCSAGWSGE---DCSNPICAGGCSNRGRCVAP 190
Query: 429 EVCTCPE 449
C+C +
Sbjct: 191 NQCSCAD 197
Score = 31.9 bits (69), Expect = 0.27
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 336 SCKTGWIYEAKTDSCVPKCTSGCVNGTC--EAPEVCTCPEPLV 458
SC G+ + + C+P+ +GCVNG C E P C C + +
Sbjct: 194 SCADGF-NGTRCEQCLPR--AGCVNGDCVNETPNTCKCRDGFI 233
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 34.7 bits (76), Expect = 0.038
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 252 YNKKRCRGKTNSGSCVITESYVSIEKSQSCKTGWIYEAKTDSCVPKCTSGCVN-GTCEAP 428
Y+ KRC + + + E S + C GW E D P C GC N G C AP
Sbjct: 136 YHGKRCNRYCIANAKLHWEC--STHGVRRCSAGWSGE---DCSNPICAGGCSNRGRCVAP 190
Query: 429 EVCTCPE 449
C+C +
Sbjct: 191 NQCSCAD 197
Score = 31.9 bits (69), Expect = 0.27
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 336 SCKTGWIYEAKTDSCVPKCTSGCVNGTC--EAPEVCTCPEPLV 458
SC G+ + + C+P+ +GCVNG C E P C C + +
Sbjct: 194 SCADGF-NGTRCEQCLPR--AGCVNGDCVNETPNTCKCRDGFI 233
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 34.3 bits (75), Expect = 0.050
Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
Frame = +3
Query: 240 TRLVYNKKRCRGKT-----NSGSCVITESYVSIEK-SQSCKTGWIYEAKTDSCVPKCTSG 401
T N C GK+ NS +C + +S + S SC +G Y A C SG
Sbjct: 472 TTTASNTNVCSGKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTASG 531
Query: 402 CVNGTCEAPEVCTCPEPLV 458
C T AP T P V
Sbjct: 532 CSVTTTRAPTTTTKSAPTV 550
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 333 QSCKTGWIYEAKTDSCVPKCTSGCVNGTCEAPEVCTC 443
+ C G+ Y+ K C+P C C G C P C C
Sbjct: 103 KQCCDGY-YQTKDHFCLPDCNPPCKKGKCIEPGKCEC 138
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 333 QSCKTGWIYEAKTDSCVPKCTSGCVNGTCEAPEVCTC 443
+ C G+ Y+ K C+P C C G C P C C
Sbjct: 103 KQCCDGY-YQTKDHFCLPDCNPPCKKGKCIEPGKCEC 138
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 333 QSCKTGWIYEAKTDSCVPKCTSGCVNGTCEAPEVCTC 443
+ C G+ Y+ K C+P C C G C P C C
Sbjct: 103 KQCCDGY-YQTKDHFCLPDCNPPCKKGKCIEPGKCEC 138
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 333 QSCKTGWIYEAKTDSCVPKCTSGCVNGTCEAPEVCTC 443
+ C G+ Y+ K C+P C C G C P C C
Sbjct: 103 KQCCDGY-YQTKDHFCLPDCNPPCKKGKCIEPGKCEC 138
>U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile
(unfertilizable) protein1 protein.
Length = 551
Score = 31.5 bits (68), Expect = 0.36
Identities = 30/97 (30%), Positives = 37/97 (38%), Gaps = 7/97 (7%)
Frame = +3
Query: 177 CDAIK-DGKGVATVDVPVIRQRTRLVYNKKRCRGKTNS----GSCVITESYVSIEKSQSC 341
CD + G A D RT++ KK C + GSC I ES+ K +C
Sbjct: 287 CDCQRCSGTDKALCDDGTCIMRTQVCDGKKDCTDGMDEEDCPGSCTI-ESFSPKLKMVTC 345
Query: 342 KTGWIY-EAKTDS-CVPKCTSGCVNGTCEAPEVCTCP 446
G Y EA+ S C C N C TCP
Sbjct: 346 SDGKQYTEAEACSGSFESCDHDCPNSKCHPKLAFTCP 382
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 31.1 bits (67), Expect = 0.47
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +3
Query: 402 CVNGT-CEAP-EVCTCPEPLVLRRGHCVEPTCS 494
CV G+ C P +C CP L R G CV P S
Sbjct: 307 CVGGSICTLPIGICLCPGDLEAREGECVLPAAS 339
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 30.3 bits (65), Expect = 0.82
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 339 CKTGWIYEAKTDSC-VPKCTSGCVNGTCEAPEVCTCPE 449
C+ GW + C +P C S +NG C P C+C E
Sbjct: 877 CEDGW----QGSRCQIPLCNSCSLNGICTRPGFCSCFE 910
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +3
Query: 330 SQSCKTGWIYEA-KTDSCVPKCTSGCVNGTCEAPEVCTCPEPLVLRRGHCVEPTCS 494
S C GW+ E SC+ S C +G C +C C + + C P C+
Sbjct: 842 SCECDAGWMGETCSVTSCID---SQCTHGHCGTNGLCKCEDG--WQGSRCQIPLCN 892
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +3
Query: 267 CRGKTNSGSCVITESYVSIEKSQSCKTGWIYEAKTDS-CVPKCTSGCVNGTCEAP-EVCT 440
C K + C + E + C G + S C KC C NG C+ CT
Sbjct: 635 CAHKCSCKLCDPSTGSCRCEDPEKCSDGPCPDGFYGSQCNLKCRMDCPNGRCDPVFGYCT 694
Query: 441 CPEPL 455
CP+ L
Sbjct: 695 CPDGL 699
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +3
Query: 267 CRGKTNSGSCVITESYVSIEKSQSCKTGWIYEAKTDS-CVPKCTSGCVNGTCEAP-EVCT 440
C K + C + E + C G + S C KC C NG C+ CT
Sbjct: 635 CAHKCSCKLCDPSTGSCRCEDPEKCSDGPCPDGFYGSQCNLKCRMDCPNGRCDPVFGYCT 694
Query: 441 CPEPL 455
CP+ L
Sbjct: 695 CPDGL 699
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 321 IEKSQSCKTG---WIYEAKTDSCVPKCTSGCVNGTCEAPEVCTC 443
++KS SC Y+ + C P C C N AP V C
Sbjct: 62 VQKSCSCAQPVQQQTYQIQASQCAPACQQSCQNQCQSAPSVSQC 105
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 321 IEKSQSCKTG---WIYEAKTDSCVPKCTSGCVNGTCEAPEVCTC 443
++KS SC Y+ + C P C C N AP V C
Sbjct: 62 VQKSCSCAQPVQQQTYQIQASQCAPACQQSCQNQCQSAPSVSQC 105
>Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical
protein F07H5.8 protein.
Length = 872
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 378 CVPKCTSGCVNGTCEAPEVCTCPEPLVLRRGHCVEPTCSPA 500
C P C C++ T + P V T P P + C +P C P+
Sbjct: 654 CQPACDPQCISFTLKLP-VMTTPPPTPSCQPQC-QPACQPS 692
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/44 (29%), Positives = 17/44 (38%)
Frame = +3
Query: 369 TDSCVPKCTSGCVNGTCEAPEVCTCPEPLVLRRGHCVEPTCSPA 500
T +CVP+C C + T P+ C P C PA
Sbjct: 615 TKTCVPQCQPACTQECVQQATTYTISIPMTTAAPSCA-PQCQPA 657
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical protein
F15B9.7 protein.
Length = 2577
Score = 28.7 bits (61), Expect = 2.5
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Frame = +3
Query: 270 RGKTNSGSCVITESYVSIEKSQSCKTGWIYEAKTDSCVPKCT--SGCVNGTCEAPEV--- 434
+GKT +G CV+ C I A++D+C+P C+ + C +GTC +
Sbjct: 1725 KGKTRAG-CVVPNR---------CSVDSICPAESDTCLPVCSVANVCSSGTCVSSNTTAG 1774
Query: 435 --CTCP 446
C CP
Sbjct: 1775 YECICP 1780
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 28.7 bits (61), Expect = 2.5
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Frame = +3
Query: 270 RGKTNSGSCVITESYVSIEKSQSCKTGWIYEAKTDSCVPKCT--SGCVNGTCEAPEV--- 434
+GKT +G CV+ C I A++D+C+P C+ + C +GTC +
Sbjct: 1725 KGKTRAG-CVVPNR---------CSVDSICPAESDTCLPVCSVANVCSSGTCVSSNTTAG 1774
Query: 435 --CTCP 446
C CP
Sbjct: 1775 YECICP 1780
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
Frame = +3
Query: 336 SCKTGWIYEAKTDSCVPKCTSGCVNG------TCEAPEVCTCPEPLVLRRGHCVEPTCSP 497
SC+ + +A +C P C+S CV + P+ + + CV+ C+P
Sbjct: 228 SCQPSCVQQACAPACQPMCSSQCVEQQQAQIVVVQQPQQQCTSSCMPACQSSCVQQACAP 287
Query: 498 A 500
A
Sbjct: 288 A 288
Score = 27.9 bits (59), Expect = 4.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 336 SCKTGWIYEAKTDSCVPKCTSGCV 407
+C++ + +A +C PKC+S CV
Sbjct: 275 ACQSSCVQQACAPACQPKCSSQCV 298
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 432 VCTCPEPLVLRRGHCV 479
+CTC EPLVL+ CV
Sbjct: 1221 LCTCNEPLVLKENKCV 1236
>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
protein F48E3.8b protein.
Length = 1299
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 432 VCTCPEPLVLRRGHCV 479
+CTC EPLVL+ CV
Sbjct: 932 LCTCNEPLVLKENKCV 947
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +3
Query: 336 SCKTGWIYEAKTDSCVPKCTSGCVNGTCEAPEVCTCPEPLVLRRGHCVEPTCSP 497
SC + Y+ +T C+P C C + C++ C +P + C +C+P
Sbjct: 58 SCASSQQYQLQTSQCMPACQQSC-SQQCQSNTNTQC-QPTC--QQSCQTSSCNP 107
>U80836-9|AAB37895.1| 303|Caenorhabditis elegans Hypothetical
protein B0432.10 protein.
Length = 303
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 288 GSCVITESYVSIEKSQSCKTGWI 356
G CV+ + Y+ EKSQS +GW+
Sbjct: 26 GKCVVQKDYLEDEKSQS-SSGWL 47
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +3
Query: 357 YEAKTDSCVPKCTSGCVNGTCEAPEVCTC 443
Y+ +T C P C C N AP + C
Sbjct: 75 YQVQTSQCAPACQQSCQNQCQFAPSMNEC 103
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +3
Query: 357 YEAKTDSCVPKCTSGCVNGTCEAPEVCTC 443
Y+ +T C P C C N AP + C
Sbjct: 76 YQVQTSQCAPACQQSCQNQCQFAPSMNEC 104
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 357 YEAKTDSCVP-KCTSGCVNGTCEAPEVCTCPEPLVLRRGHCV-EPTC 491
+E ++SC KC + C C VC ++G+CV +P C
Sbjct: 636 FERGSNSCPTCKCKNPCKEVKCPQGSVCVMSSIQCYQKGNCVPQPRC 682
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical protein
W05B2.2 protein.
Length = 1278
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 360 EAKTDSCVPKCTSGCVNGTCEAPEVCTCPEPLVLRRGHCVEPT 488
E+ SC+PK +G CEA E C P + +R C + T
Sbjct: 1215 ESNMGSCLPKLFAGETG--CEADEQCGAPATCMEQRCACPKGT 1255
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 363 AKTDSCVPKCTSGCVNGTCEAPEVCTCPEPLVLRRGHCVE 482
++T C +C SG + C+ + C L GHCV+
Sbjct: 262 SRTTQC--ECPSGFMGADCKELQARPCDREPCLNGGHCVD 299
>U41994-7|AAY55868.1| 155|Caenorhabditis elegans Hypothetical
protein F59A6.10 protein.
Length = 155
Score = 27.5 bits (58), Expect = 5.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 375 SCVPKCTSGCVNGTCEAPEVC 437
+C+P +GC C AP+VC
Sbjct: 51 ACLPVEANGCARMECSAPKVC 71
>Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical
protein Y69H2.11 protein.
Length = 887
Score = 27.1 bits (57), Expect = 7.6
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
Frame = +3
Query: 282 NSGSCVITESYVSIEKSQSCKTGWI---YEAKTDSCVPKCTSGCVNGTCEAPEV----CT 440
N+G C T ++ + +C GW + D C+P S N TC+ P+ CT
Sbjct: 384 NNGKCASTIDGITTNYTCTCDDGWTGTNCDTMIDFCIPNPCS--YNSTCK-PKFKGYDCT 440
Query: 441 C 443
C
Sbjct: 441 C 441
>U58756-8|AAY44005.1| 183|Caenorhabditis elegans Hypothetical
protein F58F9.11 protein.
Length = 183
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 285 SGSCVITESYVSIEKSQSCKTGWIYEAKTDSCVPKCTSGCVNGTCEAPEV 434
+G C S SI + +C TG ++ D+ +C++ C TC P V
Sbjct: 12 AGICRADRSTCSI--NVTCPTGGLWSEWADAEGVECSASCAQRTCCIPYV 59
>AC024863-2|AAP31420.1| 366|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 89,
isoform b protein.
Length = 366
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +1
Query: 61 GFNCDKLCKRSRRNANIELCCVEM--FYQFC-YSSSAN-DHC 174
G +CD CK S NAN+ C F+ C Y ++ D+C
Sbjct: 290 GPSCDLTCKASHVNANVAACVSNSTGFFSICNYITNGQVDNC 331
>AC024863-1|AAF60877.1| 481|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 89,
isoform a protein.
Length = 481
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +1
Query: 61 GFNCDKLCKRSRRNANIELCCVEM--FYQFC-YSSSAN-DHC 174
G +CD CK S NAN+ C F+ C Y ++ D+C
Sbjct: 290 GPSCDLTCKASHVNANVAACVSNSTGFFSICNYITNGQVDNC 331
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,658,115
Number of Sequences: 27780
Number of extensions: 243381
Number of successful extensions: 960
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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