Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14c24
(486 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1483 - 33907259-33907383,33909295-33909848,33909891-33909916 77 6e-15
01_06_1796 - 39932487-39932633,39933150-39933201,39933370-399334... 43 1e-04
01_03_0256 + 14288885-14288936,14289362-14291335,14291648-142916... 38 0.003
12_01_0794 + 7285100-7285369,7285931-7286338 36 0.023
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 36 0.023
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 36 0.023
11_03_0142 + 10675764-10675991,10676533-10676943 35 0.040
09_04_0095 - 14556508-14556550,14556824-14556966,14557703-145577... 33 0.12
07_03_1741 + 29156076-29156316,29156554-29156676,29156784-291568... 33 0.16
01_05_0199 - 19174971-19175105,19176302-19176628,19176813-191769... 31 0.37
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 31 0.65
12_01_0370 - 2835071-2835285,2835427-2836045 30 1.1
02_02_0654 - 12662931-12663200,12663296-12663550,12664097-126642... 29 1.5
02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,606... 29 1.5
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 29 2.0
11_01_0349 - 2614682-2614721,2614881-2614955,2615346-2615538,261... 29 2.0
01_05_0660 - 24071523-24071780,24071873-24072127,24072209-240723... 29 2.0
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 29 2.0
01_05_0662 - 24103475-24103735,24103831-24104085,24104280-241044... 29 2.6
01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,403... 29 2.6
11_06_0223 - 21419128-21419397,21419493-21419747,21420243-214204... 28 3.5
01_05_0659 - 24061318-24061575,24061664-24061918,24062001-240621... 28 3.5
09_06_0023 - 20299435-20299528,20299666-20299757,20299873-202999... 28 4.6
07_03_0635 + 20151861-20152249,20152589-20152709,20154914-201549... 28 4.6
03_01_0645 - 4731037-4731543,4731706-4731933 28 4.6
01_06_0556 + 30207124-30207581,30207692-30207901,30208016-302081... 28 4.6
09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,991... 27 6.0
07_03_0431 - 18152041-18152085,18152368-18152685,18152927-181534... 27 6.0
01_05_0658 - 24043655-24043945,24044003-24044257,24044359-240445... 27 6.0
10_08_0706 + 20034534-20034860,20034988-20035368 27 8.0
09_02_0501 - 9955987-9956244,9956329-9956583,9956713-9956884,995... 27 8.0
>04_04_1483 - 33907259-33907383,33909295-33909848,33909891-33909916
Length = 234
Score = 77.4 bits (182), Expect = 6e-15
Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 6/87 (6%)
Frame = +3
Query: 240 RPEAPADAGE--VRCSHILVKHAESRRPTSWREEK----ITRTKEEALELIKGYRKQIVA 401
RP A GE +R SHIL+KH SRR SWR+ + T+++A +L + R++IVA
Sbjct: 111 RPST-AGGGEKKLRASHILIKHEGSRRKASWRDPEGVAISATTRDDAADLARALREKIVA 169
Query: 402 NDAQFDEIALKYSDCSSAKRGGDLGMF 482
+ +F+++A + SDC+SAKRGGDLG F
Sbjct: 170 GERKFEDVATEESDCNSAKRGGDLGPF 196
>01_06_1796 -
39932487-39932633,39933150-39933201,39933370-39933495,
39933645-39933743,39934039-39934258,39934599-39934764,
39935108-39935161,39935527-39935657,39935747-39935818,
39936524-39936602,39936705-39936783,39936868-39936902,
39936986-39937111
Length = 461
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +3
Query: 153 LPDGWEMRTSRSTGMTYYLNTYTKKSQWERPEA 251
LP+ WE +STG YY NT T+ +QWE P A
Sbjct: 235 LPENWEEALDQSTGQKYYYNTNTQATQWEPPTA 267
Score = 36.7 bits (81), Expect = 0.010
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 153 LPDGWEMRTSRSTGMTYYLNTYTKKSQWERPEAP 254
LP GW ++G +Y+ N T +QW+RP AP
Sbjct: 188 LPPGWVEAKDPTSGASYFYNQSTGTTQWDRPGAP 221
>01_03_0256 +
14288885-14288936,14289362-14291335,14291648-14291673,
14291855-14292025,14292560-14292647,14292711-14292802,
14292920-14293384,14293860-14294633,14294890-14295087,
14296940-14297374,14297455-14297688,14298042-14298323
Length = 1596
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 132 SNENEPPLPDGWEMRTSRSTGMTYYLNTYTKKSQWERP--EAP 254
+ N LP GWE R TG ++Y++ T+ + WE P EAP
Sbjct: 519 NGRNPRTLPPGWEERFDSVTGKSFYIDHNTRTTTWEHPCQEAP 561
>12_01_0794 + 7285100-7285369,7285931-7286338
Length = 225
Score = 35.5 bits (78), Expect = 0.023
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +3
Query: 150 PLPDGWEMRTSRSTGMTYYLNTYTKKSQWERPE 248
PLP WE +G YYLN T K W RP+
Sbjct: 78 PLPLDWEQCLDLQSGRMYYLNRKTLKKSWIRPK 110
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 35.5 bits (78), Expect = 0.023
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 141 NEPPLPDGWEMRTSRSTGMTYYLNTYTKKSQWERPEAPAD 260
++P LP W +TG YY N T +Q+E+P P D
Sbjct: 15 DDPSLPKPWRGLVDGTTGYLYYWNPETNITQYEKPLPPED 54
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 35.5 bits (78), Expect = 0.023
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 144 EPPLPDGWEMRTSRSTGMTYYLNTYTKKSQWERPEAP 254
+P LP W +TG Y+ N TK Q++RP AP
Sbjct: 20 DPTLPKPWRGLIDGNTGYLYFWNPETKAVQYDRPTAP 56
>11_03_0142 + 10675764-10675991,10676533-10676943
Length = 212
Score = 34.7 bits (76), Expect = 0.040
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 150 PLPDGWEMRTSRSTGMTYYLNTYTKKSQWERP 245
PLP WE +G YYLN T + W RP
Sbjct: 64 PLPMDWEQCLDLHSGRMYYLNRKTMRKSWVRP 95
>09_04_0095 -
14556508-14556550,14556824-14556966,14557703-14557744,
14557940-14558049,14558369-14558519
Length = 162
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 423 IALKYSDCSSAKRGGDLGMF 482
IA +YS+C S K+GGDLG F
Sbjct: 102 IAQEYSECPSGKKGGDLGWF 121
>07_03_1741 +
29156076-29156316,29156554-29156676,29156784-29156875,
29157577-29157677,29157752-29157862,29158254-29158362,
29158589-29158639,29158758-29158838
Length = 302
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 354 EEALELIKGYRKQIVANDAQFDEIALKYSDCSSAKRGGDLG 476
E+ + L+ K I+ A ++A++YS C S + GG LG
Sbjct: 105 EQDVRLLVDLEKNIITGGADLSDLAVEYSLCPSKENGGMLG 145
>01_05_0199 -
19174971-19175105,19176302-19176628,19176813-19176915,
19178852-19178916,19179941-19180048,19180213-19180305,
19180395-19180442,19180801-19180899,19180980-19181096,
19181186-19181239,19181312-19181404,19181776-19181881,
19182050-19182084,19182173-19182259,19182385-19182462,
19182528-19182596,19182682-19182780,19183644-19183685,
19184498-19184570,19184654-19184982,19185070-19185127,
19185217-19185269,19186075-19186144,19186276-19186337,
19186452-19186540,19186906-19187011,19187110-19187178,
19187295-19187330
Length = 900
Score = 31.5 bits (68), Expect = 0.37
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 135 NENEPPLPDGWEMRTSRSTGMTYYLNTYTKKSQWERP 245
N +E D W+ TS + G YY N T++S WE+P
Sbjct: 102 NSSETSSSD-WQEHTS-ADGKKYYYNKKTRQSSWEKP 136
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 165 WEMRTSRSTGMTYYLNTYTKKSQWERPEAPADAGEVRCSHILVKHAESRRP 317
W+ T++ G YY N TK+S+W P+ E++ + L + A + RP
Sbjct: 152 WKEFTTQE-GRKYYYNKVTKQSKWTIPD------ELKIARELAEKASNPRP 195
>08_02_0520 - 18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 30.7 bits (66), Expect = 0.65
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 253 RQMLVRSAAVIYWLNTLK-AVAQLPGAKRRSRAQRKRLWS*SKAIANRLLQMTHSLMKLP 429
R+M + + LN L+ A+ LPG S QRKRL + +AN + M P
Sbjct: 1014 RKMFIEQVMELVELNPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSI----IFMDEP 1069
Query: 430 SSILTARLLSVVVTWV 477
+S L AR ++V+ V
Sbjct: 1070 TSGLDARAAAIVMRTV 1085
>12_01_0370 - 2835071-2835285,2835427-2836045
Length = 277
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 156 PDGWEMRTSRSTGMTYYLNTYTKKSQWERPEAPADAGEVRCSHILVKHAESRRP 317
P W + T + Y+ + Y ++ +E+P P+D G++ I +HAE P
Sbjct: 11 PQAWPWGVAMYTNLHYH-HHYEREHLFEKPLTPSDVGKLNRLVIPKQHAERYFP 63
>02_02_0654 -
12662931-12663200,12663296-12663550,12664097-12664268,
12664354-12664581,12664727-12664860,12665018-12665101,
12665332-12665538,12665641-12665973,12666175-12666281,
12666439-12666593,12666778-12666810,12666924-12666972,
12667152-12667312,12667413-12668313,12668391-12668481,
12668558-12668749
Length = 1123
Score = 29.5 bits (63), Expect = 1.5
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 253 RQMLVRSAAVIYWLNTL-KAVAQLPGAKRRSRAQRKRLWS*SKAIANRLLQMTHSLMKLP 429
R+M V + L+ L A+ LPG S QRKRL + +AN + M P
Sbjct: 673 RKMFVEEVMALVELDVLCNAMVGLPGVSGLSTEQRKRLTIAVELVANPSI----IFMDEP 728
Query: 430 SSILTARLLSVVVTWVCL 483
+S L AR ++V+ + L
Sbjct: 729 TSGLDARAAAIVMRTLLL 746
>02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,
6069207-6069291,6069421-6069580,6069667-6069743,
6069848-6069898,6069979-6070069,6070167-6070468,
6070549-6070830,6070911-6071388,6071457-6071560,
6071647-6071809,6071895-6072017,6072099-6072217,
6072304-6072636,6072713-6073003,6073088-6073171,
6073260-6073393,6073478-6073705,6073795-6073966,
6074062-6074316,6074408-6074668
Length = 1444
Score = 29.5 bits (63), Expect = 1.5
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 253 RQMLVRSAAVIYWLNTLK-AVAQLPGAKRRSRAQRKRLWS*SKAIANRLLQMTHSLMKLP 429
R+M V + L +L+ A+ LPG S QRKRL + +AN + M P
Sbjct: 969 RKMFVEEVMELVELTSLRGALVGLPGVNGLSTEQRKRLTIAVELVANPSI----IFMDEP 1024
Query: 430 SSILTARLLSVVVTWV 477
+S L AR ++V+ V
Sbjct: 1025 TSGLDARAAAIVMRTV 1040
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 141 NEPPLPDGWEMRTSRSTGMTYYLNTYTKKSQWERPEA 251
++P LP W+ ST YY N T ++Q+ERP A
Sbjct: 18 DDPTLPAPWKGLIDGST--LYYWNPDTNETQYERPVA 52
>11_01_0349 -
2614682-2614721,2614881-2614955,2615346-2615538,
2615654-2616287
Length = 313
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 156 PDGWEMRTSRSTGMTYYLNTYTKKSQWERPEAPADAGEVRCSHILVKHAESRRP 317
P W + Y+ + Y K+ +E+P P+D G++ I +HAE P
Sbjct: 13 PQSWPWGVAMYANFHYH-HHYEKEHMFEKPLTPSDVGKLNRLVIPKQHAERYFP 65
>01_05_0660 - 24071523-24071780,24071873-24072127,24072209-24072380,
24072458-24072685,24072785-24072918,24073005-24073088,
24073231-24073521,24073599-24073931,24074016-24074266,
24074354-24074620,24074707-24074867,24074978-24075294,
24075386-24075667,24075753-24076054,24076147-24076237,
24076326-24076379,24076497-24076573,24076700-24076859,
24077129-24077213,24077421-24077630,24077736-24078097
Length = 1457
Score = 29.1 bits (62), Expect = 2.0
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 253 RQMLVRSAAVIYWLNTLK-AVAQLPGAKRRSRAQRKRLWS*SKAIANRLLQMTHSLMKLP 429
R+M + + L +L+ A+ LPG S QRKRL + +AN + M P
Sbjct: 983 RKMFIEEVMELVELKSLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSI----IFMDEP 1038
Query: 430 SSILTARLLSVVVTWV 477
+S L AR ++V+ V
Sbjct: 1039 TSGLDARAAAIVMRTV 1054
>01_03_0179 + 13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 29.1 bits (62), Expect = 2.0
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 253 RQMLVRSAAVIYWLNTLK-AVAQLPGAKRRSRAQRKRLWS*SKAIANRLLQMTHSLMKLP 429
R+M + + L +L+ A+ LPG S QRKRL + +AN + M P
Sbjct: 1013 RKMFIEEVMELVELTSLRGALVGLPGVNGLSTEQRKRLTVAVELVANPSI----IFMDEP 1068
Query: 430 SSILTARLLSVVVTWV 477
+S L AR ++V+ V
Sbjct: 1069 TSGLDARAAAIVMRTV 1084
>01_05_0662 - 24103475-24103735,24103831-24104085,24104280-24104451,
24104535-24104762,24104864-24104997,24105101-24105184,
24105273-24105563,24105660-24105992,24106081-24106334,
24106435-24106591,24106674-24106777,24106879-24107039,
24107216-24107529,24107614-24107895,24107991-24108292,
24108367-24108457,24108566-24108619,24108785-24108861,
24108963-24109207,24109322-24109410,24110811-24111254
Length = 1443
Score = 28.7 bits (61), Expect = 2.6
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 253 RQMLVRSAAVIYWLNTLK-AVAQLPGAKRRSRAQRKRLWS*SKAIANRLLQMTHSLMKLP 429
R+M + + L +L+ A+ LPG S QRKRL + +AN + M P
Sbjct: 968 RKMFIEEVMDLVELTSLRGALVGLPGVSGLSTEQRKRLTIAVELVANPSI----IFMDEP 1023
Query: 430 SSILTARLLSVVVTWV 477
+S L AR ++V+ V
Sbjct: 1024 TSGLDARAAAIVMRTV 1039
>01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,
4034616-4034839,4035168-4035332,4035591-4035881,
4035971-4036303,4036391-4036485,4036570-4036689,
4036778-4036934,4037176-4037279,4037383-4037543,
4037636-4037952,4038655-4038936,4039020-4039321,
4039453-4039543,4040227-4040280,4040367-4040684,
4041008-4041092,4041178-4041266,4041474-4041594,
4042136-4042431
Length = 1434
Score = 28.7 bits (61), Expect = 2.6
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 253 RQMLVRSAAVIYWLNTLK-AVAQLPGAKRRSRAQRKRLWS*SKAIANRLLQMTHSLMKLP 429
R++ V + LN L A+ LPG S QRKRL + +AN + M P
Sbjct: 974 RRVFVEEVMELVELNALSGALVGLPGVNGLSTEQRKRLTIAVELVANPSI----VFMDEP 1029
Query: 430 SSILTARLLSVVVTWV 477
+S L AR ++V+ V
Sbjct: 1030 TSGLDARSAAIVMRTV 1045
>11_06_0223 - 21419128-21419397,21419493-21419747,21420243-21420414,
21420530-21420757,21420916-21421049,21421309-21421392,
21421554-21421760,21421871-21422203,21422343-21422449,
21422823-21422988,21423127-21423230,21423347-21423507,
21423595-21424495,21424642-21424732,21424837-21425127,
21425491-21425575,21425665-21425747,21427653-21427773,
21427785-21428260
Length = 1422
Score = 28.3 bits (60), Expect = 3.5
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 253 RQMLVRSAAVIYWLNTLK-AVAQLPGAKRRSRAQRKRLWS*SKAIANRLLQMTHSLMKLP 429
R+M V + L+ L+ A+ LPG S QRKRL + +AN + M P
Sbjct: 972 RKMFVDEVMSLVELDVLRNALVGLPGVSGLSTEQRKRLTIAVELVANPSV----IFMDEP 1027
Query: 430 SSILTARLLSVVVTWVCL 483
+S L AR ++V+ + L
Sbjct: 1028 TSGLDARAAAIVMRTLLL 1045
>01_05_0659 - 24061318-24061575,24061664-24061918,24062001-24062172,
24062258-24062381,24062442-24062485,24063601-24063734,
24063822-24063905,24064100-24064390,24064713-24065045,
24065145-24065389,24065644-24065910,24065997-24066157,
24066253-24066569,24066665-24066946,24067024-24067325,
24067398-24067488,24067796-24067849,24067963-24068039,
24068159-24068318,24068653-24068737,24069029-24069238,
24069344-24069732
Length = 1444
Score = 28.3 bits (60), Expect = 3.5
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 253 RQMLVRSAAVIYWLNTLK-AVAQLPGAKRRSRAQRKRLWS*SKAIANRLLQMTHSLMKLP 429
R+M + + L L+ A+ LPG S QRKRL + +AN + M P
Sbjct: 990 RKMFIEEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSI----IFMDEP 1045
Query: 430 SSILTARLLSVVVTWV 477
+S L AR ++V+ V
Sbjct: 1046 TSGLDARAAAIVMRTV 1061
>09_06_0023 -
20299435-20299528,20299666-20299757,20299873-20299955,
20300066-20300147,20300235-20300462,20300646-20300747,
20300834-20300969,20301105-20301514
Length = 408
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 369 LIKGYRKQIVANDAQFDEIALKYSDCSSAKRGGDLG 476
+++ Y +Q+ A D + I L+Y + A R GD+G
Sbjct: 218 VLENYFRQVQAADPEMRVILLRYFNPIGAHRSGDIG 253
>07_03_0635 + 20151861-20152249,20152589-20152709,20154914-20154996,
20155819-20155903,20155987-20156277,20156555-20156645,
20157380-20158280,20158401-20158561,20158759-20158862,
20159040-20159205,20159283-20159378,20159694-20159800,
20160443-20160775,20161393-20161599,20161774-20161857,
20162887-20163020,20163166-20163393,20163541-20163712,
20164301-20164555,20164647-20164919
Length = 1426
Score = 27.9 bits (59), Expect = 4.6
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 253 RQMLVRSAAVIYWLNTLK-AVAQLPGAKRRSRAQRKRLWS*SKAIANRLLQMTHSLMKLP 429
R++ V + L+ L+ A+ LPG S QRKRL + +AN + M P
Sbjct: 975 RKVFVEEVMSLVELDVLRDALVGLPGVSGLSTEQRKRLTIAVELVANPSI----IFMDEP 1030
Query: 430 SSILTARLLSVVVTWVCL 483
+S L AR ++V+ + L
Sbjct: 1031 TSGLDARAAAIVMRTLLL 1048
>03_01_0645 - 4731037-4731543,4731706-4731933
Length = 244
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 150 PLPDGWEMRTSRSTGMTYYLNTYTKKSQWERPEAPADAGEVRCSH 284
PLP W+ +G +Y NT T K P A A SH
Sbjct: 64 PLPLEWQRCLDIKSGQIHYYNTRTHKRTSRDPRAEAPPAPAPESH 108
>01_06_0556 + 30207124-30207581,30207692-30207901,30208016-30208100,
30208517-30208676,30208768-30208844,30208985-30209032,
30209504-30209594,30209703-30210004,30210214-30210495,
30210695-30211011,30211113-30211273,30211556-30211665,
30211752-30211902,30212438-30212578,30212688-30212857,
30213485-30213817,30213981-30214271,30214356-30214439,
30214620-30214753,30214946-30215173,30215273-30215444,
30215621-30215875,30215963-30216232
Length = 1509
Score = 27.9 bits (59), Expect = 4.6
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 217 IPRSLNGSVLKHRQMLVRSAAVIYWLNTLK-AVAQLPGAKRRSRAQRKRLWS*SKAIANR 393
+P+ +N + +++ V + L LK A+ LPG S QRKRL + +AN
Sbjct: 1022 LPKEVND---QEKKIFVDEVMELVELTGLKDAIVGLPGVNGLSTEQRKRLTIAVELVANP 1078
Query: 394 LLQMTHSLMKLPSSILTARLLSVVVTWV 477
+ M P+S L AR ++V+ V
Sbjct: 1079 SI----IFMDEPTSGLDARAAAIVMRTV 1102
>09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,
9919056-9919283,9919628-9919761,9919842-9919925,
9920007-9920297,9920569-9920901,9921029-9921171,
9921266-9921379,9921470-9921626,9921709-9921812,
9921914-9922074,9922158-9922474,9922574-9922855,
9923205-9923506,9923603-9923693,9923864-9923917,
9924052-9924128,9924213-9924372,9924473-9924557,
9924635-9924723,9925791-9925925
Length = 1341
Score = 27.5 bits (58), Expect = 6.0
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 253 RQMLVRSAAVIYWLNTLK-AVAQLPGAKRRSRAQRKRLWS*SKAIANRLLQMTHSLMKLP 429
R+M + + L+ LK ++ LPG S QRKRL + +AN + M P
Sbjct: 867 RKMFIDEVMELVELSPLKDSLVGLPGVSGLSTEQRKRLTIAVELVANPSI----IFMDEP 922
Query: 430 SSILTARLLSVVV 468
+S L AR ++V+
Sbjct: 923 TSGLDARAAAIVM 935
>07_03_0431 -
18152041-18152085,18152368-18152685,18152927-18153482,
18153886-18154577,18155234-18155614,18156159-18156241,
18156618-18156786,18157498-18157543,18158301-18158389,
18158476-18158591,18159137-18159443
Length = 933
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 276 CSHILVKHAESRRPTSWREEKITRTKEEALELIKGYRKQIVANDAQFD 419
CS ++ +HA R E K +R +EE + + +V + AQ D
Sbjct: 55 CSDVVAEHAGRRSKRGGGEAKSSRVEEEQRNIRAWMDRAVVKSCAQMD 102
>01_05_0658 - 24043655-24043945,24044003-24044257,24044359-24044530,
24044617-24044844,24045688-24045821,24045908-24045991,
24046202-24046492,24046571-24046903,24047002-24047246,
24047476-24047742,24048305-24048465,24048556-24048872,
24048966-24049247,24049325-24049626,24049699-24049789,
24049881-24049934,24050028-24050104,24050192-24050367,
24051331-24051540,24051626-24052029
Length = 1457
Score = 27.5 bits (58), Expect = 6.0
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 253 RQMLVRSAAVIYWLNTLK-AVAQLPGAKRRSRAQRKRLWS*SKAIANRLLQMTHSLMKLP 429
R+M + + L L+ A+ LPG S QRKRL + +AN + M P
Sbjct: 972 RKMFIEEVMELVELKPLRDALVGLPGVNGLSIEQRKRLTIAVELVANPSI----IFMDEP 1027
Query: 430 SSILTARLLSVVVTWV 477
+S L AR ++V+ V
Sbjct: 1028 TSGLDARAAAIVMRTV 1043
>10_08_0706 + 20034534-20034860,20034988-20035368
Length = 235
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = +3
Query: 243 PEAPADAGEVRCSHILVKHAESRRPTSWREEKITRTKEEALELIKGYRKQIVANDAQFDE 422
P P+D E + + + + SW + + +T+EE E +K + +A F+E
Sbjct: 87 PLLPSDPYERAVARFWAAYIDDKLLKSWLQASMGKTEEEKAEALKETFTAVANLEAAFEE 146
>09_02_0501 - 9955987-9956244,9956329-9956583,9956713-9956884,
9957000-9957227,9959102-9959235,9959319-9959402,
9959539-9959829,9960076-9960405,9960526-9960668,
9960970-9961126,9961210-9961313,9961423-9961583,
9961664-9961980,9962094-9962375,9962471-9962772,
9962848-9962938,9963262-9963338,9963428-9963587,
9963682-9963766,9963838-9963949,9964864-9964943,
9968644-9968981
Length = 1386
Score = 27.1 bits (57), Expect = 8.0
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 253 RQMLVRSAAVIYWLNTLK-AVAQLPGAKRRSRAQRKRLWS*SKAIANRLLQMTHSLMKLP 429
R+M++ + L LK A+ LPG S QRKRL + +AN + + P
Sbjct: 912 RKMIIEEVMELVELYPLKDALVGLPGVSGLSIEQRKRLTIAVELVANPSI----IFLDEP 967
Query: 430 SSILTARLLSVVV 468
+S L AR ++V+
Sbjct: 968 TSGLDARAAAIVM 980
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,195,905
Number of Sequences: 37544
Number of extensions: 233894
Number of successful extensions: 698
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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