Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14c24
(486 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein. 48 1e-07
AY578796-1|AAT07301.1| 437|Anopheles gambiae Gbb-60A protein. 24 3.2
U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic aci... 23 4.2
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 23 4.2
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 23 7.3
AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein. 23 7.3
AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein. 23 7.3
AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein. 23 7.3
AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein. 23 7.3
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 23 7.3
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 23 7.3
AF117748-1|AAD38334.1| 365|Anopheles gambiae serine protease 14... 22 9.7
>AY578810-1|AAT07315.1| 897|Anopheles gambiae smurf protein.
Length = 897
Score = 48.4 bits (110), Expect = 1e-07
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +3
Query: 153 LPDGWEMRTSRSTGMTYYLNTYTKKSQWERPEAPA 257
LP GWE R++++ G TYY+N YTK +QW RP PA
Sbjct: 163 LPRGWEERSAQN-GRTYYVNHYTKTTQWSRPTEPA 196
Score = 29.9 bits (64), Expect = 0.048
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 129 MSNENEPPLPDGWEMRTSRSTGMTYYLNTYTKKSQWERP 245
++ E PLP GWE R + S G Y+++ + +Q+ P
Sbjct: 368 LTTETLGPLPHGWEQRKTAS-GRVYFVDHNNRTTQFTDP 405
Score = 28.3 bits (60), Expect = 0.15
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 168 EMRTSRSTGMTYYLNTYTKKSQWERPEAPAD 260
E+RT++ G Y+ + TK+S W P P D
Sbjct: 333 EIRTTQQ-GQVYFYHIPTKQSTWHDPRIPRD 362
>AY578796-1|AAT07301.1| 437|Anopheles gambiae Gbb-60A protein.
Length = 437
Score = 23.8 bits (49), Expect = 3.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 201 YYLNTYTKKSQWERPEAPADAGEVR 275
+ LN Y + Q E +APA AG +R
Sbjct: 92 FLLNVYDQLQQ-EETDAPAGAGRIR 115
>U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic acid
binding protein protein.
Length = 388
Score = 23.4 bits (48), Expect = 4.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 421 KLPSSILTARLLSVVVTWVCLG 486
KLP ++ A L +V + W C+G
Sbjct: 45 KLPPELIDAVLSNVDLHWSCIG 66
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 23.4 bits (48), Expect = 4.2
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +3
Query: 222 KKSQWERPEAPADAGEVRCSHILVKHAESRRPTSWREEKI 341
+K QWE P + + I+ + R P W E ++
Sbjct: 362 RKQQWEGARVPMERDANKLQFIVNELFLERPPMEWPETEV 401
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 22.6 bits (46), Expect = 7.3
Identities = 12/68 (17%), Positives = 28/68 (41%)
Frame = +3
Query: 237 ERPEAPADAGEVRCSHILVKHAESRRPTSWREEKITRTKEEALELIKGYRKQIVANDAQF 416
ER P D + + +L +S+ +W + + +E L++ +++ +
Sbjct: 242 ERLNEPVDKWDTPLTSLLFYKLDSKTLVAWEQYSVDFKTDEFTNLVEFLEQRVNILKSSA 301
Query: 417 DEIALKYS 440
I +YS
Sbjct: 302 QNICNQYS 309
>AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 22.6 bits (46), Expect = 7.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 333 EKITRTKEEALELIKGYRKQIV 398
E+ +R EEAL L+ +QIV
Sbjct: 253 EESSRRAEEALNLVPNIERQIV 274
>AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 22.6 bits (46), Expect = 7.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 333 EKITRTKEEALELIKGYRKQIV 398
E+ +R EEAL L+ +QIV
Sbjct: 253 EESSRRAEEALNLVPNIERQIV 274
>AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 22.6 bits (46), Expect = 7.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 333 EKITRTKEEALELIKGYRKQIV 398
E+ +R EEAL L+ +QIV
Sbjct: 253 EESSRRAEEALNLVPNIERQIV 274
>AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 22.6 bits (46), Expect = 7.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 333 EKITRTKEEALELIKGYRKQIV 398
E+ +R EEAL L+ +QIV
Sbjct: 253 EESSRRAEEALNLVPNIERQIV 274
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 22.6 bits (46), Expect = 7.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 333 EKITRTKEEALELIKGYRKQIV 398
E+ +R EEAL L+ +QIV
Sbjct: 1392 EESSRRAEEALNLVPNIERQIV 1413
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 22.6 bits (46), Expect = 7.3
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +3
Query: 315 PTSWREEKITRTKEEALELIKGYRKQIVANDAQFDEIALKYSDCSSAKRG 464
P SW E+ + + + G+R ++A D F+ A+++ + RG
Sbjct: 88 PPSWELERFHVMLDNLVAELDGHRPLVIAGD--FNAWAVEWGSKRTNSRG 135
>AF117748-1|AAD38334.1| 365|Anopheles gambiae serine protease 14A
protein.
Length = 365
Score = 22.2 bits (45), Expect = 9.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 303 QRV*PVYDCSGPHQH 259
Q V P YD +GP+QH
Sbjct: 207 QIVHPGYDKNGPYQH 221
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,759
Number of Sequences: 2352
Number of extensions: 8846
Number of successful extensions: 29
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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