Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14c10
         (580 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060798-1|AAL28346.1|  203|Drosophila melanogaster GH26351p pro...   227   1e-59
AE014296-3046|AAF49241.2|  203|Drosophila melanogaster CG4108-PA...   227   1e-59
BT003747-1|AAO41408.1|  256|Drosophila melanogaster RH72336p pro...    65   6e-11
AE014297-3911|AAF56559.1|  256|Drosophila melanogaster CG14542-P...    65   6e-11
AY094715-1|AAM11068.1|  243|Drosophila melanogaster GH16325p pro...    64   1e-10

>AY060798-1|AAL28346.1|  203|Drosophila melanogaster GH26351p
           protein.
          Length = 203

 Score =  227 bits (554), Expect = 1e-59
 Identities = 116/149 (77%), Positives = 125/149 (83%)
 Frame = +3

Query: 132 MSSSAMEKHLFNLKFAVKELERNSXXXXXXXXXXXXXXXXAIQKGNMEGARIHAENAIRQ 311
           MS+S+MEKHLFNLKFAVKELERNS                AIQKGNM+ ARIHAENAIRQ
Sbjct: 1   MSTSSMEKHLFNLKFAVKELERNSKKCEKEEKLEKAKAKKAIQKGNMDVARIHAENAIRQ 60

Query: 312 KNQALNYLRMSARVDAVSSRVQTALTTRKVTNSMAGVVKAMDAAMKSMNLEKISTLMDKF 491
           KNQA+NYLRMSARVDAV+SRVQ+ALTTRKVT SMAGVVKAMDAAMK MNLEKIS+LM+KF
Sbjct: 61  KNQAVNYLRMSARVDAVASRVQSALTTRKVTGSMAGVVKAMDAAMKGMNLEKISSLMEKF 120

Query: 492 ESQFEDLDVQSSYMENAMSQTTTTTVPQG 578
           ESQFEDLDVQSS ME  MS T TT+VPQG
Sbjct: 121 ESQFEDLDVQSSVMEGTMSDTVTTSVPQG 149


>AE014296-3046|AAF49241.2|  203|Drosophila melanogaster CG4108-PA
           protein.
          Length = 203

 Score =  227 bits (554), Expect = 1e-59
 Identities = 116/149 (77%), Positives = 125/149 (83%)
 Frame = +3

Query: 132 MSSSAMEKHLFNLKFAVKELERNSXXXXXXXXXXXXXXXXAIQKGNMEGARIHAENAIRQ 311
           MS+S+MEKHLFNLKFAVKELERNS                AIQKGNM+ ARIHAENAIRQ
Sbjct: 1   MSTSSMEKHLFNLKFAVKELERNSKKCEKEEKLEKAKAKKAIQKGNMDVARIHAENAIRQ 60

Query: 312 KNQALNYLRMSARVDAVSSRVQTALTTRKVTNSMAGVVKAMDAAMKSMNLEKISTLMDKF 491
           KNQA+NYLRMSARVDAV+SRVQ+ALTTRKVT SMAGVVKAMDAAMK MNLEKIS+LM+KF
Sbjct: 61  KNQAVNYLRMSARVDAVASRVQSALTTRKVTGSMAGVVKAMDAAMKGMNLEKISSLMEKF 120

Query: 492 ESQFEDLDVQSSYMENAMSQTTTTTVPQG 578
           ESQFEDLDVQSS ME  MS T TT+VPQG
Sbjct: 121 ESQFEDLDVQSSVMEGTMSDTVTTSVPQG 149


>BT003747-1|AAO41408.1|  256|Drosophila melanogaster RH72336p
           protein.
          Length = 256

 Score = 65.3 bits (152), Expect = 6e-11
 Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
 Frame = +3

Query: 123 GNEMSSSAM-EKHLFNLKFAVKELERNSXXXXXXXXXXXXXXXXAIQKGNMEGARIHAEN 299
           G ++S   M  K+   L  A+++L+R                    ++G M+  +I A++
Sbjct: 6   GKKISPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKIIADIKKMAKEGQMDAVKIMAKD 65

Query: 300 AIRQKNQALNYLRMSARVDAVSSRVQTALTTRKVTNSMAGVVKAMDAAMKSMNLEKISTL 479
            +R +  A  ++ M A + AVS ++QT  +   +  +M GV KAM    + +NL +I  +
Sbjct: 66  LVRTRRYAKKFMLMKANIQAVSLKIQTLKSQNTMAQAMKGVTKAMQNMNRQLNLPQIQKI 125

Query: 480 MDKFESQFEDLDVQSSYMENAM 545
           +  FE Q E +D++   + +A+
Sbjct: 126 LQDFEKQSEMMDMKEEMINDAI 147


>AE014297-3911|AAF56559.1|  256|Drosophila melanogaster CG14542-PA
           protein.
          Length = 256

 Score = 65.3 bits (152), Expect = 6e-11
 Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
 Frame = +3

Query: 123 GNEMSSSAM-EKHLFNLKFAVKELERNSXXXXXXXXXXXXXXXXAIQKGNMEGARIHAEN 299
           G ++S   M  K+   L  A+++L+R                    ++G M+  +I A++
Sbjct: 6   GKKISPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKIIADIKKMAKEGQMDAVKIMAKD 65

Query: 300 AIRQKNQALNYLRMSARVDAVSSRVQTALTTRKVTNSMAGVVKAMDAAMKSMNLEKISTL 479
            +R +  A  ++ M A + AVS ++QT  +   +  +M GV KAM    + +NL +I  +
Sbjct: 66  LVRTRRYAKKFMLMKANIQAVSLKIQTLKSQNTMAQAMKGVTKAMQNMNRQLNLPQIQKI 125

Query: 480 MDKFESQFEDLDVQSSYMENAM 545
           +  FE Q E +D++   + +A+
Sbjct: 126 LQDFEKQSEMMDMKEEMINDAI 147


>AY094715-1|AAM11068.1|  243|Drosophila melanogaster GH16325p
           protein.
          Length = 243

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 33/133 (24%), Positives = 66/133 (49%)
 Frame = +3

Query: 147 MEKHLFNLKFAVKELERNSXXXXXXXXXXXXXXXXAIQKGNMEGARIHAENAIRQKNQAL 326
           + K+   L  A+++L+R                    ++G M+  +I A++ +R +  A 
Sbjct: 2   LRKNQRALNKAMRDLDRERMKMEQQEKKIIADIKKMAKEGQMDAVKIMAKDLVRTRRYAK 61

Query: 327 NYLRMSARVDAVSSRVQTALTTRKVTNSMAGVVKAMDAAMKSMNLEKISTLMDKFESQFE 506
            ++ M A + AVS ++QT  +   +  +M GV KAM    + +NL +I  ++  FE Q E
Sbjct: 62  KFMLMKANIQAVSLKIQTLKSQNTMAQAMKGVTKAMQNMNRQLNLPQIQKILQDFEKQSE 121

Query: 507 DLDVQSSYMENAM 545
            +D++   + +A+
Sbjct: 122 MMDMKEEMINDAI 134


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,638,826
Number of Sequences: 53049
Number of extensions: 329328
Number of successful extensions: 907
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)