Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14c09
         (219 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellula...    26   8.2  
AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellula...    26   8.2  
AF205357-1|AAG37995.1| 2174|Drosophila melanogaster extracellula...    26   8.2  
AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-P...    26   8.2  
AE014297-4237|AAF56794.3| 2772|Drosophila melanogaster CG33103-P...    26   8.2  

>AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellular
           matrix protein papilin3 protein.
          Length = 2898

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 82  LVKSTKKVTCVTIKSELITEKINTGTCT 165
           L   TK V C   K E ++EK N+  CT
Sbjct: 667 LSNGTKSVNCDEEKVEPLSEKCNSEACT 694


>AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellular
           matrix protein papilin2 protein.
          Length = 2776

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 82  LVKSTKKVTCVTIKSELITEKINTGTCT 165
           L   TK V C   K E ++EK N+  CT
Sbjct: 667 LSNGTKSVNCDEEKVEPLSEKCNSEACT 694


>AF205357-1|AAG37995.1| 2174|Drosophila melanogaster extracellular
           matrix protein papilinprotein.
          Length = 2174

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 82  LVKSTKKVTCVTIKSELITEKINTGTCT 165
           L   TK V C   K E ++EK N+  CT
Sbjct: 667 LSNGTKSVNCDEEKVEPLSEKCNSEACT 694


>AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-PA,
           isoform A protein.
          Length = 2894

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 82  LVKSTKKVTCVTIKSELITEKINTGTCT 165
           L   TK V C   K E ++EK N+  CT
Sbjct: 667 LSNGTKSVNCDEEKVEPLSEKCNSEACT 694


>AE014297-4237|AAF56794.3| 2772|Drosophila melanogaster CG33103-PB,
           isoform B protein.
          Length = 2772

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 82  LVKSTKKVTCVTIKSELITEKINTGTCT 165
           L   TK V C   K E ++EK N+  CT
Sbjct: 667 LSNGTKSVNCDEEKVEPLSEKCNSEACT 694


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,946,873
Number of Sequences: 53049
Number of extensions: 102676
Number of successful extensions: 172
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 24,988,368
effective HSP length: 52
effective length of database: 22,229,820
effective search space used: 444596400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)