Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14b24
         (557 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1591|AAF52734.1|  275|Drosophila melanogaster CG9555-PA...    30   1.8  
BT001724-1|AAN71479.1|  568|Drosophila melanogaster RE69557p pro...    30   2.4  
AE014296-3637|AAF51793.2|  568|Drosophila melanogaster CG7442-PA...    30   2.4  
AY069169-1|AAL39314.1|  461|Drosophila melanogaster GH20973p pro...    29   4.3  
AE013599-4017|AAM68328.1|  461|Drosophila melanogaster CG2679-PB...    29   4.3  
AY071461-1|AAL49083.1|  691|Drosophila melanogaster RE54096p pro...    29   5.6  
AE014296-3713|AAF51857.2|  680|Drosophila melanogaster CG7369-PA...    29   5.6  
AE014297-3330|AAF56138.2|  481|Drosophila melanogaster CG17382-P...    28   9.8  

>AE014134-1591|AAF52734.1|  275|Drosophila melanogaster CG9555-PA
           protein.
          Length = 275

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 392 LLFIISWITPSLVMSTVCGC 333
           + FI+ W  P L + TVCGC
Sbjct: 210 IYFILDWERPGLAIGTVCGC 229


>BT001724-1|AAN71479.1|  568|Drosophila melanogaster RE69557p
           protein.
          Length = 568

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = -1

Query: 413 NSTA*GSLLFIISWITPSLVMSTVCGCRYS--GSPCLTTLSGAGVY--GIDPDSLYVVLY 246
           N+ A  +L+ I  +  P L+M    G RYS  G    + L   G    G D   L +VL+
Sbjct: 394 NNFAYIALVEIPGFFMPLLIMDRF-GRRYSLCGLMLASGLCCIGTIFTGADQPVLQLVLF 452

Query: 245 FLSTLTITACLQFTYF 198
            +  LTITA  Q  YF
Sbjct: 453 LVGKLTITASFQVLYF 468


>AE014296-3637|AAF51793.2|  568|Drosophila melanogaster CG7442-PA
           protein.
          Length = 568

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = -1

Query: 413 NSTA*GSLLFIISWITPSLVMSTVCGCRYS--GSPCLTTLSGAGVY--GIDPDSLYVVLY 246
           N+ A  +L+ I  +  P L+M    G RYS  G    + L   G    G D   L +VL+
Sbjct: 394 NNFAYIALVEIPGFFMPLLIMDRF-GRRYSLCGLMLASGLCCIGTIFTGADQPVLQLVLF 452

Query: 245 FLSTLTITACLQFTYF 198
            +  LTITA  Q  YF
Sbjct: 453 LVGKLTITASFQVLYF 468


>AY069169-1|AAL39314.1|  461|Drosophila melanogaster GH20973p
           protein.
          Length = 461

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +1

Query: 133 RYVLEQGNLQVKFVAKDIASSLKYVNCKQAVIVNVDKKYKTTYS 264
           + V++   +Q+K   ++IA+ + Y N  Q + + +DK Y  T S
Sbjct: 173 KQVMQLEKMQIKGKTRNIAAVITYQNIGQDLSLTLDKGYNVTIS 216


>AE013599-4017|AAM68328.1|  461|Drosophila melanogaster CG2679-PB,
           isoform B protein.
          Length = 461

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +1

Query: 133 RYVLEQGNLQVKFVAKDIASSLKYVNCKQAVIVNVDKKYKTTYS 264
           + V++   +Q+K   ++IA+ + Y N  Q + + +DK Y  T S
Sbjct: 173 KQVMQLEKMQIKGKTRNIAAVITYQNIGQDLSLTLDKGYNVTIS 216


>AY071461-1|AAL49083.1|  691|Drosophila melanogaster RE54096p
           protein.
          Length = 691

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = -3

Query: 369 NTLLGDEHCVRLQVQWVTLLDHVVWSRGIWYRPRLAVRRFVFFVN 235
           NT    +HC+RL  +W+ +  +      +  + R+  R+ V+  N
Sbjct: 226 NTQRSAQHCIRLLSEWIEIFPYDFRDERLMQQVRILARKCVYIDN 270


>AE014296-3713|AAF51857.2|  680|Drosophila melanogaster CG7369-PA
           protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = -3

Query: 369 NTLLGDEHCVRLQVQWVTLLDHVVWSRGIWYRPRLAVRRFVFFVN 235
           NT    +HC+RL  +W+ +  +      +  + R+  R+ V+  N
Sbjct: 226 NTQRSAQHCIRLLSEWIEIFPYDFRDERLMQQVRILARKCVYIDN 270


>AE014297-3330|AAF56138.2|  481|Drosophila melanogaster CG17382-PA
           protein.
          Length = 481

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = -1

Query: 263 LYVVLYF---LSTLTITACLQFTYFKLLAMSLATNL 165
           L VVLYF     TL + + L F YFKLL   L+ +L
Sbjct: 54  LNVVLYFSRWTRTLNVFSYLAFPYFKLLKQRLSGSL 89


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,944,318
Number of Sequences: 53049
Number of extensions: 454049
Number of successful extensions: 1144
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)