Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14b05
(643 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81069-8|CAB02996.2| 600|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z69662-7|CAA93497.2| 1132|Caenorhabditis elegans Hypothetical pr... 29 3.7
AL021448-4|CAA16278.2| 600|Caenorhabditis elegans Hypothetical ... 29 3.7
AF040642-3|AAN73872.2| 502|Caenorhabditis elegans Hypothetical ... 29 3.7
Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical pr... 28 6.5
U49830-2|AAV58878.1| 324|Caenorhabditis elegans Hypothetical pr... 28 6.5
U49830-1|AAK31483.1| 458|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL132949-8|CAB61079.1| 471|Caenorhabditis elegans Hypothetical ... 28 6.5
AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocar... 28 6.5
U29537-7|AAO38649.1| 239|Caenorhabditis elegans Egg laying defe... 27 8.6
U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12 transcrip... 27 8.6
AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical ... 27 8.6
AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical ... 27 8.6
AF283982-1|AAG13397.1| 471|Caenorhabditis elegans transcription... 27 8.6
AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z81069-8|CAB02996.2| 600|Caenorhabditis elegans Hypothetical
protein Y2H9A.4 protein.
Length = 600
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 235 FFNYIRDDINLEECITVPKYKHIVN 161
FFN +RDD+ +EE + +Y I+N
Sbjct: 24 FFNLVRDDLPIEETQVIREYDLILN 48
>Z69662-7|CAA93497.2| 1132|Caenorhabditis elegans Hypothetical
protein F56D5.9 protein.
Length = 1132
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -1
Query: 355 FVNGKTKFDESHEDLFILKMADGTVVTCKVNGELVNSDKNFFNYIRDDI 209
+ N KF+E H D+ IL V VNGE V S + I ++
Sbjct: 179 YKNVVKKFNERHSDISILDDIIDAVQEFTVNGEFVKSSASLLRTISQNL 227
>AL021448-4|CAA16278.2| 600|Caenorhabditis elegans Hypothetical
protein Y2H9A.4 protein.
Length = 600
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 235 FFNYIRDDINLEECITVPKYKHIVN 161
FFN +RDD+ +EE + +Y I+N
Sbjct: 24 FFNLVRDDLPIEETQVIREYDLILN 48
>AF040642-3|AAN73872.2| 502|Caenorhabditis elegans Hypothetical
protein C50D2.7 protein.
Length = 502
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 389 AELDVEKIFRVKHEQIHRA*-FFVVYDWYRGFNDNSK 496
+E V IF KH +H + FF+V WY +ND +
Sbjct: 3 SETFVPSIFSYKHRLLHLSVLFFIVPYWYSYYNDQHR 39
>Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical
protein C41G7.5b protein.
Length = 560
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = -1
Query: 331 DESHEDLFILKMADGTVVTCKVNGELVNSDKNFFNYIRDDINLEECITVPKYKHIVNVNL 152
+ES+ + LK G ++ NGE+ + +N NY+ + + + P Y I + +
Sbjct: 83 EESNFEEISLKSLGGFILVLNDNGEIYYASENVENYL--GFHQSDVLHQPVYDLIHSEDR 140
Query: 151 KSLRVFEDNNF 119
+R D+NF
Sbjct: 141 DDIRQQLDSNF 151
>Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical
protein C41G7.5a protein.
Length = 602
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = -1
Query: 331 DESHEDLFILKMADGTVVTCKVNGELVNSDKNFFNYIRDDINLEECITVPKYKHIVNVNL 152
+ES+ + LK G ++ NGE+ + +N NY+ + + + P Y I + +
Sbjct: 125 EESNFEEISLKSLGGFILVLNDNGEIYYASENVENYL--GFHQSDVLHQPVYDLIHSEDR 182
Query: 151 KSLRVFEDNNF 119
+R D+NF
Sbjct: 183 DDIRQQLDSNF 193
>U49830-2|AAV58878.1| 324|Caenorhabditis elegans Hypothetical
protein C33F10.4b protein.
Length = 324
Score = 27.9 bits (59), Expect = 6.5
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Frame = -2
Query: 438 WICSCLTLNIFSTSSSACARITIRRKRCL*MEKPSLTSLTKICLYSKWPTVLWLRAKLMV 259
W+ S +IF SSS+C + TI L P + + L K P VL L+ L+
Sbjct: 104 WVISINPTSIFPNSSSSCCQ-TINVGSLL----PGIRKTFQCQLTCKDPPVL-LQLSLLR 157
Query: 258 SWSIR--IKIFSITLGTTLI--WKNALRCPNTSILSTSTS 151
++ + +K F + L L+ W A R ++ ++ TS
Sbjct: 158 TYQLGGIVKCFKVKLDPILVTAWNQAQRVERKNMETSFTS 197
>U49830-1|AAK31483.1| 458|Caenorhabditis elegans Hypothetical
protein C33F10.4a protein.
Length = 458
Score = 27.9 bits (59), Expect = 6.5
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Frame = -2
Query: 438 WICSCLTLNIFSTSSSACARITIRRKRCL*MEKPSLTSLTKICLYSKWPTVLWLRAKLMV 259
W+ S +IF SSS+C + TI L P + + L K P VL L+ L+
Sbjct: 104 WVISINPTSIFPNSSSSCCQ-TINVGSLL----PGIRKTFQCQLTCKDPPVL-LQLSLLR 157
Query: 258 SWSIR--IKIFSITLGTTLI--WKNALRCPNTSILSTSTS 151
++ + +K F + L L+ W A R ++ ++ TS
Sbjct: 158 TYQLGGIVKCFKVKLDPILVTAWNQAQRVERKNMETSFTS 197
>AL132949-8|CAB61079.1| 471|Caenorhabditis elegans Hypothetical
protein Y53F4B.10 protein.
Length = 471
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/61 (19%), Positives = 29/61 (47%)
Frame = -1
Query: 310 FILKMADGTVVTCKVNGELVNSDKNFFNYIRDDINLEECITVPKYKHIVNVNLKSLRVFE 131
F+ + ++ K+ +++ F +Y D N+E+ P + ++N NL ++ F
Sbjct: 53 FVPNNLESKTISAKLKDPILSDRHPFEDYYHDQQNVEQNSENPVKRLLLNTNLDDIQAFR 112
Query: 130 D 128
+
Sbjct: 113 N 113
>AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocarbon
receptor orthologAHR-1 protein.
Length = 602
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = -1
Query: 331 DESHEDLFILKMADGTVVTCKVNGELVNSDKNFFNYIRDDINLEECITVPKYKHIVNVNL 152
+ES+ + LK G ++ NGE+ + +N NY+ + + + P Y I + +
Sbjct: 125 EESNFEEISLKSLGGFILVLNDNGEIYYASENVENYL--GFHQSDVLHQPVYDLIHSEDR 182
Query: 151 KSLRVFEDNNF 119
+R D+NF
Sbjct: 183 DDIRQQLDSNF 193
>U29537-7|AAO38649.1| 239|Caenorhabditis elegans Egg laying
defective protein 44,isoform e protein.
Length = 239
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = -1
Query: 193 ITVPKYKHIVNVNLKSLR---VFEDNNFDKNDVDLSDTRSRKPRIVPIISASSENAD 32
+T+ + V N SLR V +N +K+D+D+S + P+++ + SE D
Sbjct: 36 LTLHSFSAYVKCNKTSLRTELVKIENTLEKDDIDISVFYEKYPKLLRELFEKSEKKD 92
>U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12
transcriptional activator protein.
Length = 515
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 185 AQIQAYCQRQPQKPQSVRRQQF 120
AQ QA Q+Q Q+PQ +RQ+F
Sbjct: 241 AQAQAQWQQQEQQPQEQQRQRF 262
>AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical
protein Y79H2A.1b protein.
Length = 466
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 185 AQIQAYCQRQPQKPQSVRRQQF 120
AQ QA Q+Q Q+PQ +RQ+F
Sbjct: 192 AQAQAQWQQQEQQPQEQQRQRF 213
>AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical
protein Y79H2A.1a protein.
Length = 552
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 185 AQIQAYCQRQPQKPQSVRRQQF 120
AQ QA Q+Q Q+PQ +RQ+F
Sbjct: 278 AQAQAQWQQQEQQPQEQQRQRF 299
>AF283982-1|AAG13397.1| 471|Caenorhabditis elegans transcription
enhancer factor-1-like protein EGL-44 protein.
Length = 471
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = -1
Query: 193 ITVPKYKHIVNVNLKSLR---VFEDNNFDKNDVDLSDTRSRKPRIVPIISASSENAD 32
+T+ + V N SLR V +N +K+D+D+S + P+++ + SE D
Sbjct: 268 LTLHSFSAYVKCNKTSLRTELVKIENTLEKDDIDISVFYEKYPKLLRELFEKSEKKD 324
>AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical
protein C51G7.4 protein.
Length = 579
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 185 AQIQAYCQRQPQKPQSVRRQQF 120
AQ QA Q+Q Q+PQ +RQ+F
Sbjct: 305 AQAQAQWQQQEQQPQEQQRQRF 326
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,737,772
Number of Sequences: 27780
Number of extensions: 357741
Number of successful extensions: 1098
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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