Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14a19
         (425 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          26   0.64 
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          26   0.64 
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          26   0.64 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          22   7.9  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 25.8 bits (54), Expect = 0.64
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -1

Query: 116 FENYNTMFS*IVIQKVIQMMLIQHKTGIAINNGTHIHY 3
           FE +NT    + IQ V+ +      TGI +++G  + +
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 162


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 25.8 bits (54), Expect = 0.64
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -1

Query: 116 FENYNTMFS*IVIQKVIQMMLIQHKTGIAINNGTHIHY 3
           FE +NT    + IQ V+ +      TGI +++G  + +
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 162


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 25.8 bits (54), Expect = 0.64
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -1

Query: 116 FENYNTMFS*IVIQKVIQMMLIQHKTGIAINNGTHIHY 3
           FE +NT    + IQ V+ +      TGI +++G  + +
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 162


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 144 TKQYLGLTEAQDTLNFPGL 200
           T Q L L+ +  T+N+PG+
Sbjct: 104 TLQNLNLSSSAGTMNYPGM 122


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 382,499
Number of Sequences: 2352
Number of extensions: 6528
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 34867302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)