Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14a15
         (646 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U60666-1|AAB02976.1|  463|Homo sapiens testis specific leucine r...    34   0.38 
BC047286-1|AAH47286.1|  466|Homo sapiens leucine rich repeat con...    34   0.38 
BC027589-1|AAH27589.1|  411|Homo sapiens LRRC6 protein protein.        34   0.38 
AF041462-1|AAB99794.1|  348|Homo sapiens I-FLICE isoform 5 protein.    31   2.7  
BC036549-1|AAH36549.2|  514|Homo sapiens major facilitator super...    31   4.6  
AK091896-1|BAC03767.1|  514|Homo sapiens protein ( Homo sapiens ...    31   4.6  

>U60666-1|AAB02976.1|  463|Homo sapiens testis specific leucine rich
           repeat protein protein.
          Length = 463

 Score = 34.3 bits (75), Expect = 0.38
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
 Frame = +3

Query: 126 STDELSIYRIYHIAKMCRDVKMLKTNMAIVNYMGNCNTCQ--ADMRVALNNLFRDLWNLD 299
           S  +  I R+ HI K CRD+K+L     ++  + N +  +    + +ALNN+   + NL+
Sbjct: 27  SLHQQEIERLEHIDKWCRDLKILYLQNNLIGKIENVSKLKKLEYLNLALNNI-EKIENLE 85

Query: 300 D-ENLITLALYVN----KNKVSDMLHNLKCK 377
             E L  L L VN     + + ++ HN+  K
Sbjct: 86  GCEELAKLDLTVNFIGELSSIKNLQHNIHLK 116


>BC047286-1|AAH47286.1|  466|Homo sapiens leucine rich repeat
           containing 6 protein.
          Length = 466

 Score = 34.3 bits (75), Expect = 0.38
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
 Frame = +3

Query: 126 STDELSIYRIYHIAKMCRDVKMLKTNMAIVNYMGNCNTCQ--ADMRVALNNLFRDLWNLD 299
           S  +  I R+ HI K CRD+K+L     ++  + N +  +    + +ALNN+   + NL+
Sbjct: 27  SLHQQEIERLEHIDKWCRDLKILYLQNNLIGKIENVSKLKKLEYLNLALNNI-EKIENLE 85

Query: 300 D-ENLITLALYVN----KNKVSDMLHNLKCK 377
             E L  L L VN     + + ++ HN+  K
Sbjct: 86  GCEELAKLDLTVNFIGELSSIKNLQHNIHLK 116


>BC027589-1|AAH27589.1|  411|Homo sapiens LRRC6 protein protein.
          Length = 411

 Score = 34.3 bits (75), Expect = 0.38
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
 Frame = +3

Query: 126 STDELSIYRIYHIAKMCRDVKMLKTNMAIVNYMGNCNTCQ--ADMRVALNNLFRDLWNLD 299
           S  +  I R+ HI K CRD+K+L     ++  + N +  +    + +ALNN+   + NL+
Sbjct: 27  SLHQQEIERLEHIDKWCRDLKILYLQNNLIGKIENVSKLKKLEYLNLALNNI-EKIENLE 85

Query: 300 D-ENLITLALYVN----KNKVSDMLHNLKCK 377
             E L  L L VN     + + ++ HN+  K
Sbjct: 86  GCEELAKLDLTVNFIGELSSIKNLQHNIHLK 116


>AF041462-1|AAB99794.1|  348|Homo sapiens I-FLICE isoform 5 protein.
          Length = 348

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = +3

Query: 336 KNKVSDMLHNLKCKPCRSTVSGSR---PKCKCYKKIKINRKALKVCLIADMFGNDAEL 500
           +  + D  +N + +P + ++  S    P+    ++ K+  K L +CLI D  GN+ EL
Sbjct: 95  QKSLKDPSNNFREEPVKKSIQESEAFLPQSIPEERYKMKSKPLGICLIIDCIGNETEL 152


>BC036549-1|AAH36549.2|  514|Homo sapiens major facilitator
           superfamily domain containing 4 protein.
          Length = 514

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 129 TDELSIYRIYHIAKMCRDVKMLKTNMAIVNYMGNCNTCQADMRV 260
           T  L+I  ++ +   CRDVK+L + MA+      C    A+M++
Sbjct: 87  TSSLAISLVFAVIPFCRDVKVLASVMALAGLAMGCIDTVANMQL 130


>AK091896-1|BAC03767.1|  514|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34577 fis, clone KIDNE2008403. ).
          Length = 514

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 129 TDELSIYRIYHIAKMCRDVKMLKTNMAIVNYMGNCNTCQADMRV 260
           T  L+I  ++ +   CRDVK+L + MA+      C    A+M++
Sbjct: 87  TSSLAISLVFAVIPFCRDVKVLASVMALAGLAMGCIDTVANMQL 130


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,373,423
Number of Sequences: 237096
Number of extensions: 1639383
Number of successful extensions: 3594
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3594
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)