Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14a15
         (646 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-3172|AAF50954.1|  395|Drosophila melanogaster CG14620-P...    31   1.0  
U00180-1|AAC46462.1|  760|Drosophila melanogaster E(z) protein.        29   4.1  
AY051785-1|AAK93209.1|  760|Drosophila melanogaster LD30505p pro...    29   4.1  
AE014297-4293|AAF56834.2|  413|Drosophila melanogaster CG11828-P...    29   4.1  
AE014296-1830|AAF50149.1|  760|Drosophila melanogaster CG6502-PA...    29   4.1  

>AE014298-3172|AAF50954.1|  395|Drosophila melanogaster CG14620-PA
           protein.
          Length = 395

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
 Frame = +3

Query: 75  TDEEYLPEDAFNYMLSTSTDELSIYR-----IYHIAKMCRDVKMLKTNMAIVNYMGNCNT 239
           T+E    +   N  L ++ +E+S+++     I HI   CRD+K+L     ++  + N + 
Sbjct: 5   TEELVRKKSEHNERLISTLEEISLHQEDIEVIEHIQNWCRDLKILLLQSNLIARLENLHK 64

Query: 240 CQ--ADMRVALNNLFRDLWNLDD-ENLITLALYVN 335
            +    + VA+NN+ R + NL+  E+L  L L +N
Sbjct: 65  LKRLEYLNVAINNIER-VENLEGCESLSKLDLTLN 98


>U00180-1|AAC46462.1|  760|Drosophila melanogaster E(z) protein.
          Length = 760

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -3

Query: 617 LCSLKKNSPCLVNKFAVRANQRGRHVRFVGKN*HPN*FAQFCIVT 483
           +CS   N   L N F V A ++G  +RF   + +PN +A+  +VT
Sbjct: 676 MCSFLFN---LNNDFVVDATRKGNKIRFANHSINPNCYAKVMMVT 717


>AY051785-1|AAK93209.1|  760|Drosophila melanogaster LD30505p
           protein.
          Length = 760

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -3

Query: 617 LCSLKKNSPCLVNKFAVRANQRGRHVRFVGKN*HPN*FAQFCIVT 483
           +CS   N   L N F V A ++G  +RF   + +PN +A+  +VT
Sbjct: 676 MCSFLFN---LNNDFVVDATRKGNKIRFANHSINPNCYAKVMMVT 717


>AE014297-4293|AAF56834.2|  413|Drosophila melanogaster CG11828-PA
           protein.
          Length = 413

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +3

Query: 6   TNSFHSNCPFLLGTTLPQTLKKPTDEE--YLP 95
           T S  + CP LLG    ++LK+P D    YLP
Sbjct: 357 TRSLQATCPVLLGNQWGKSLKQPIDSSLFYLP 388


>AE014296-1830|AAF50149.1|  760|Drosophila melanogaster CG6502-PA
           protein.
          Length = 760

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -3

Query: 617 LCSLKKNSPCLVNKFAVRANQRGRHVRFVGKN*HPN*FAQFCIVT 483
           +CS   N   L N F V A ++G  +RF   + +PN +A+  +VT
Sbjct: 676 MCSFLFN---LNNDFVVDATRKGNKIRFANHSINPNCYAKVMMVT 717


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,994,781
Number of Sequences: 53049
Number of extensions: 532049
Number of successful extensions: 1425
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1425
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)