Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13p14
(668 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 69 3e-12
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 69 3e-12
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 69 3e-12
SB_4038| Best HMM Match : v110 (HMM E-Value=5.5) 38 0.010
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 33 0.16
SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9) 31 0.85
SB_30408| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 31 1.1
SB_18286| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23) 30 1.5
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_54245| Best HMM Match : CBFNT (HMM E-Value=5.8) 29 3.4
SB_17802| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3) 28 6.0
SB_50181| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051) 28 7.9
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 2
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 43
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 2
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 43
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 2
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 2
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 2
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 2
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 2
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 423
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 2
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 499
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 2
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 43
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 2
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 2
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 2
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 2
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 2
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL
Sbjct: 79 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 121
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 2
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRL
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 43
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = -2
Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 2
MQI +K KT T + E ++TV +K+KI ++EG+P QRL
Sbjct: 77 MQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRL 118
>SB_4038| Best HMM Match : v110 (HMM E-Value=5.5)
Length = 228
Score = 37.5 bits (83), Expect = 0.010
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 142 YL*MTTVAVNVPLPPPMVELCNRRPIPTP 228
YL + +N P PPP +++CN+RP+P+P
Sbjct: 50 YLKNASDLMNAPPPPPSLQVCNKRPLPSP 78
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -2
Query: 175 AHSQQPLSFISNSVKMQIFIKTLTGKTITAETE-PAETVADLKQKIADKEGVPVDQQRL 2
AH + +SN I + TLTG+ I + P T+ ++K I K G P DQQRL
Sbjct: 59 AHFEDDDQIVSNP---HIAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRL 114
>SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9)
Length = 678
Score = 31.1 bits (67), Expect = 0.85
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 175 PLPPPMVELCNRRPIPTPRIISLQRQLISTPVIKNYQADVQEAIDAFKRL 324
PLPPP VE+ N P P + + +Q + V ++ Q + A D + L
Sbjct: 15 PLPPPPVEMPNEPLPPLPDSVLMNKQRVMGTVHESLQTLLNHASDHYTTL 64
>SB_30408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 31.1 bits (67), Expect = 0.85
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 315 ESIYRFLHVGLIIFDYGRGNQLPLKGNNSWCGY 217
++I LH ++ D + +Q KGNNSWCG+
Sbjct: 456 QAILAVLHHTVLSDDSKKRHQYCSKGNNSWCGF 488
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/37 (54%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 139 SVKMQIFIKTLTGKTITAETEPAETVADLKQKI-ADK 32
SV M I KTL +T E ETV LKQKI ADK
Sbjct: 64 SVNMIITFKTLQQQTFKVEIGEDETVLKLKQKIEADK 100
>SB_18286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 315 ESIYRFLHVGLIIFDYGRGNQLPLKGNNSWCGY 217
++I LH ++ D + +Q KGNNSWCG+
Sbjct: 507 QAILAVLHHTVLSDDSKKRHQYCPKGNNSWCGF 539
>SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23)
Length = 1153
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 157 TVAVNVPLPPPMVELCNRRPIPTPRIISLQRQLISTPVIKNYQADVQEA 303
TV +P P + + +P+PTP + SL L+S V+ QA + A
Sbjct: 825 TVISALPSPTVVPTVPPAKPVPTPVVSSLTTPLVSATVLNASQAQTRVA 873
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 130 MQIFIKTLTGKTITAETEPAETVADLKQKI 41
M ++I+TLTG P ET+ +K KI
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKI 30
>SB_54245| Best HMM Match : CBFNT (HMM E-Value=5.8)
Length = 177
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +1
Query: 142 YL*MTTVAVNVPLPPPMVELCNRRPIPTPRIISLQRQLISTPVIKNYQADVQEAIDAFKR 321
+L +TT V + LP V ++ P+ PRI Q P I + D F R
Sbjct: 101 FLKLTTKLVGMALPIDSVVDLHKDPVSIPRISHHQHHQQRAPHIVRKPVSTLRSFDGFSR 160
Query: 322 LNIT 333
+T
Sbjct: 161 RGVT 164
>SB_17802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +1
Query: 247 RQLISTPVIKNYQADVQEAIDAFKRLNITPGHLGEVIDAMGQQGRLLPEIIEADDDFKVN 426
R+LIS+ V + ++ AI A K L + P H G +A + PEI D ++
Sbjct: 179 RRLISSFVTRRTRSRTDAAILAVKSLRLDPSHTGRPKNAASSIDPINPEIHRPRD---LS 235
Query: 427 QTRNLSCKTVE 459
R++ +T++
Sbjct: 236 AQRSIDQQTID 246
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 514 HADWLWCDFHRNHAYRGTRDIACNNYVEHLNSDMGVVMLVEE 639
H DW WC R + R + D A NSD G +M +E
Sbjct: 580 HPDWKWCTKDRKKSPRKSTDSAEIAGYSEGNSDFGEMMSDDE 621
>SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3)
Length = 1165
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 175 PLPPPMVELCNRRPIPTPRIISLQRQLISTPVIKNYQADVQEA 303
PLPPP VE+ N P P + + +Q + V ++ Q + A
Sbjct: 463 PLPPPPVEMPNEPLPPLPDSVLMNKQRVMGTVHESLQTLLNHA 505
>SB_50181| Best HMM Match : zf-C2H2 (HMM E-Value=0.0051)
Length = 503
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -3
Query: 93 LPPKRNPQRRWPISSKKLPIK-KVC 22
LPP PQ +W +S K+P K K C
Sbjct: 142 LPPTDKPQFKWDVSISKIPSKLKEC 166
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 166 VNVPLPPPMVELCNRRPIPTPRIISLQRQLISTPVIKNYQADVQEAIDAFKRLNITP 336
V+ P PPP RR PR +S++R P++++ A A A +I P
Sbjct: 580 VSQPTPPPQTPSATRRTDTRPRPVSIER----VPLMEDTSARASLAFSAESLNDINP 632
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,668,257
Number of Sequences: 59808
Number of extensions: 504149
Number of successful extensions: 1628
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1623
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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