Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13p11
(572 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29535-14|AAK31455.3| 516|Caenorhabditis elegans Hypothetical p... 75 4e-14
AF045640-2|AAM81123.1| 185|Caenorhabditis elegans Hypothetical ... 31 0.77
U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical pr... 30 1.0
U66217-1|AAB07466.1| 86|Caenorhabditis elegans ZK563.5 protein. 30 1.0
U40061-4|AAA81151.3| 239|Caenorhabditis elegans Hypothetical pr... 29 2.3
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 29 3.1
U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 29 3.1
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 29 3.1
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 29 3.1
Z82266-6|CAB05176.1| 393|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z22174-2|CAA80130.2| 410|Caenorhabditis elegans Hypothetical pr... 28 5.4
U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF101305-1|AAF98592.2| 179|Caenorhabditis elegans Hypothetical ... 28 5.4
AY079166-1|AAL86013.1| 311|Caenorhabditis elegans heat shock-li... 27 7.2
AL132858-5|CAB60481.1| 311|Caenorhabditis elegans Hypothetical ... 27 7.2
Z81056-8|CAB02907.2| 307|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF045643-6|AAC02593.2| 570|Caenorhabditis elegans Hypothetical ... 27 9.5
>U29535-14|AAK31455.3| 516|Caenorhabditis elegans Hypothetical
protein C25H3.4 protein.
Length = 516
Score = 74.9 bits (176), Expect = 4e-14
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Frame = +1
Query: 112 MFAKPYKLKSNNTLKNSEKKQLAQRIIHEFPTITEEKVKQLVPAKSIGICMKLVLSSGDI 291
MF KP+ +K N +NS+ ++L R+ E + K V +KL G
Sbjct: 1 MFKKPFTVKKNTNQRNSDSRKLFNRLKEEVNGESNIDKKGQVAQ------VKLTTFEGTQ 54
Query: 292 VNVYVIDGVPIIMEVAEG--LVPTVCALWQAPEMVPHIIIHTPVFPKVQGGAPLYLPGVE 465
+NVY ID VP++ E +E + PTV +W + P +I H PVF ++ GA L LPGV
Sbjct: 55 MNVYTIDKVPMLFEFSENGNIYPTVYYMWNNQKTFPVLICHEPVFSYLENGADLMLPGV- 113
Query: 466 LPAGGTGFPQFCKGELIA 519
+ + FP F KG +A
Sbjct: 114 IRSSIFPFPTFRKGAPVA 131
>AF045640-2|AAM81123.1| 185|Caenorhabditis elegans Hypothetical
protein C11D2.7 protein.
Length = 185
Score = 30.7 bits (66), Expect = 0.77
Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Frame = +1
Query: 151 LKNSEKKQLAQRIIHEFPTITEEKVKQLVPAKSIGICMKLVLSSGDIVNVYVIDGVPIIM 330
LK+S +K + +++I FP + E +++++P K K++ I + GV +
Sbjct: 17 LKSSVQKGIRKKLIENFPYL-EPHLEEILPKKEN---FKVIKCKDHIELLADHLGVVRFV 72
Query: 331 EVAE-GLVPTVCALWQAPEMVPHIIIHTPVFPKVQGGAPLYLPGVELPAGGTGFPQFCKG 507
+ +PT+ L + P ++PH + + G+ + PG+ P G P K
Sbjct: 73 KTRNTDYIPTLRTLHKYPFILPHQQVDKGAIKFILNGSSIMCPGLTSP-GAKLTPLVPKD 131
Query: 508 ELIA 519
++A
Sbjct: 132 SVVA 135
>U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical
protein T20F7.7 protein.
Length = 497
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +1
Query: 124 PYKLKSNNTLKNSEKKQLAQRIIHEFPTITEEKVKQLVPAKSIGICMKLVLSSGDIVNV 300
P L + L+N K + Q ++H+ IT E++ QLV +K + ++L +S GD + V
Sbjct: 6 PETLFHDLILENVVKFGIRQALVHDNQVITFEEIPQLV-SKLVYKLLELGISQGDTILV 63
>U66217-1|AAB07466.1| 86|Caenorhabditis elegans ZK563.5 protein.
Length = 86
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = -3
Query: 402 NDMWDHFRSLPERAHRRD-QPFC-YFHYNWHPVYHVHIYN 289
N W + P H +D +PF YF W +Y+V ++N
Sbjct: 2 NPQWAEWFXFPHNHHAKDTEPFXKYFDKTWIEIYYVSLHN 41
>U40061-4|AAA81151.3| 239|Caenorhabditis elegans Hypothetical
protein ZK563.5 protein.
Length = 239
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -3
Query: 402 NDMWDHFRSLPERAHRRD-QPFC-YFHYNWHPVYHVHIYN 289
N W + + P H +D +PF YF W +Y+V ++N
Sbjct: 122 NPQWADWFAFPYNHHAKDTEPFRKYFDKTWIEIYYVSLHN 161
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 378 SLPERA-HRRDQPFCYFHYNWHPVYHVHIYNVSRGQHQFHA 259
S P R H +FH+N H +H H +NV H F A
Sbjct: 130 STPSRVPHHPSSQVHHFHHNLH--HHTHTHNVQVQNHYFGA 168
>U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform d
protein.
Length = 868
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 378 SLPERA-HRRDQPFCYFHYNWHPVYHVHIYNVSRGQHQFHA 259
S P R H +FH+N H +H H +NV H F A
Sbjct: 130 STPSRVPHHPSSQVHHFHHNLH--HHTHTHNVQVQNHYFGA 168
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 378 SLPERA-HRRDQPFCYFHYNWHPVYHVHIYNVSRGQHQFHA 259
S P R H +FH+N H +H H +NV H F A
Sbjct: 130 STPSRVPHHPSSQVHHFHHNLH--HHTHTHNVQVQNHYFGA 168
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 302 YTFTMSPEDNTNFMQMPIDLAGTSCFTFSSVIVGNS 195
Y FT+SP D T F P+D + F ++ G S
Sbjct: 1596 YNFTISPFDGTIFTNSPLDFENIKTYRF-NITAGKS 1630
>Z82266-6|CAB05176.1| 393|Caenorhabditis elegans Hypothetical
protein F23B2.10 protein.
Length = 393
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 202 PTITEEKVKQLV-PAKSIGICMKLVLSSGDIVNVYVIDGVPIIMEVAEGL 348
P T+E ++ ++ KSIGIC V+++G +V ++ + + ++A+ L
Sbjct: 129 PHTTDELLETIILRIKSIGICADCVINNGLKEDVVMMKNIKRLYDIAKAL 178
>Z22174-2|CAA80130.2| 410|Caenorhabditis elegans Hypothetical
protein K01B6.3 protein.
Length = 410
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = -2
Query: 271 PISCKCLSIWRVPAASLSLQLLSETHE*SFALTVSFLNSLTCYWISTYTVLRTFRFFVRT 92
P K L++ P+ +L + ++ T L V ++ W Y+ FF+
Sbjct: 67 PFFWKTLAVPGTPSWALLVCIIESTFALICFLAVMLHYAIFLPWCEVYSK-PLMVFFLTA 125
Query: 91 LNYGIFVSFRGNF*VSYI 38
L Y IF SF+ F +S +
Sbjct: 126 LQYAIFYSFKVIFMISIV 143
>U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical
protein D1014.7 protein.
Length = 492
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 314 PSITYTFTMSPEDNTNFMQMPIDLAGTSCFTFSS 213
PSI + FT + E N N P+ L + F F+S
Sbjct: 37 PSIGHYFTHTTEFNKNIHNAPLSLRENTLFAFNS 70
>AF101305-1|AAF98592.2| 179|Caenorhabditis elegans Hypothetical
protein C04F5.2 protein.
Length = 179
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = -1
Query: 446 RGAPPW---TFGKTGVCIMICGTISGACQSAHTVGTNPSATSIIIGTPSITYTFT 291
RG+ P+ FG +C +ICG CQ G + S++ + Y T
Sbjct: 67 RGSHPFFGLLFGCVLLCYIICGVAEAVCQFLFLFGGSSDTLSVVYLIYDLAYAAT 121
>AY079166-1|AAL86013.1| 311|Caenorhabditis elegans heat shock-like
protein protein.
Length = 311
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 357 RRDQPFCYFHYNWHPVYHVHIYNVS 283
+ DQ CYFHY YH+H++ ++
Sbjct: 233 KTDQIKCYFHYQ-PSFYHLHVHFIN 256
>AL132858-5|CAB60481.1| 311|Caenorhabditis elegans Hypothetical
protein Y113G7A.9 protein.
Length = 311
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 357 RRDQPFCYFHYNWHPVYHVHIYNVS 283
+ DQ CYFHY YH+H++ ++
Sbjct: 233 KTDQIKCYFHYQ-PSFYHLHVHFIN 256
>Z81056-8|CAB02907.2| 307|Caenorhabditis elegans Hypothetical
protein F09F3.12 protein.
Length = 307
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = -2
Query: 289 CLQRTTP--ISCKCLSIWRVPAASLSLQ 212
CL +T P + C C IW VP S ++
Sbjct: 46 CLVKTVPNIVVCACFLIWAVPLGSFRVK 73
>AF045643-6|AAC02593.2| 570|Caenorhabditis elegans Hypothetical
protein F58H7.2 protein.
Length = 570
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 34 RKYTRPKNFHGNSQIFHNLMS*RKIEMFAKPYKLKSNNTLKNSE 165
R R NF F L R +E+ AKP++ + N+LKN E
Sbjct: 35 RAADRKINFEWAKNSFQKLDESRAVEISAKPFE-ELRNSLKNGE 77
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,819,382
Number of Sequences: 27780
Number of extensions: 323803
Number of successful extensions: 1093
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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