Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13p09
(723 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.17
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.38
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 29 0.89
SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9 |Sch... 28 1.2
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 28 1.2
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 28 1.2
SPBC1289.12 |usp109||U1 snRNP-associated protein Usp109|Schizosa... 28 1.6
SPAC17G6.02c |||RTA1-like protein|Schizosaccharomyces pombe|chr ... 27 2.7
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 27 2.7
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 27 2.7
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.7
SPBC32C12.02 |ste11|aff1, stex|transcription factor Ste11|Schizo... 27 3.6
SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyce... 26 4.7
SPBC106.08c |mug2||DUF1773 family protein 1|Schizosaccharomyces ... 26 4.7
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 26 4.7
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 4.7
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 6.3
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 26 6.3
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 25 8.3
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 25 8.3
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 31.1 bits (67), Expect = 0.17
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +1
Query: 532 PSPAISATSTRSSN---PRFHTPTTPDLTSIS-INPLTPYXXEFAPGLKP 669
P P+IS T+T SS H PTTPD ++ + L P +P KP
Sbjct: 273 PKPSISTTTTGSSYRSAESSHAPTTPDHFKLTPLTKLEPQPPSGSPSKKP 322
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.38
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 529 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXXEFAPGLKPPLSSEAP 690
PP PA ++++ SS+P T +T TS SI P P + PP SS P
Sbjct: 370 PPPPASTSSTGTSSSPLLST-STSCTTSTSIPPTGNSTTPVTPTV-PPTSSSTP 421
Score = 29.1 bits (62), Expect = 0.67
Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 4/111 (3%)
Frame = +3
Query: 273 TGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKVPVTVDLCWTTADVT 452
T T S +T + +S+ Y + + + S P PVT C T+ V
Sbjct: 482 TSTPVTSTPLTTTNCTTSTSV--PYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVL 539
Query: 453 VEGVNVLATPSSSRITIGGLALMHQATLPCDLGYI----NPIIKSPIPYTN 593
V +TP ++ ++ + +T Y P+ +P+ TN
Sbjct: 540 YTSTPVTSTPLATTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTN 590
Score = 28.3 bits (60), Expect = 1.2
Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 6/109 (5%)
Frame = +3
Query: 285 TKSNSVTVQSLPNVSSIIKG--YRDAYLVNLEAVVFPSAPSLKVPVTVDLCWTTADVTVE 458
T +N T S+P S+ + +V + S P P+T C T+ +
Sbjct: 423 TTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSTPLTTTNCTTSTSIPYT 482
Query: 459 GVNVLATPSSSRITIGGLALMHQATLPCDLGYI----NPIIKSPIPYTN 593
V +TP ++ ++ + +T Y P+ +P+ TN
Sbjct: 483 STPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTN 531
Score = 26.6 bits (56), Expect = 3.6
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +1
Query: 529 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXXEFAPGLKPPLSSEAPSACLTP 708
PP PA ++++ SS+P + +T TS SI P P + PP S+ + S P
Sbjct: 316 PPPPASTSSTGTSSSP-LPSTSTSCTTSTSIPPTGNSTTPVTPTV-PPTSTSSTSTPPPP 373
Query: 709 LVT 717
T
Sbjct: 374 AST 376
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.7 bits (61), Expect = 0.89
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 42 SAASAIPSLVDAFSSSKPPQTDTPP 116
S S+ PSL + +S PP T TPP
Sbjct: 158 STVSSTPSLNHSLQNSMPPSTPTPP 182
>SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 577
Score = 28.3 bits (60), Expect = 1.2
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 226 LLNV*SSLFNACTSILPAPKPNRTVSLCNHYQTSPPS*KAT 348
+L V S +++A TS LP+ V+L Q SPPS K T
Sbjct: 131 VLFVNSGMWSASTSFLPSSFAMNMVTLALSAQLSPPSTKRT 171
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +1
Query: 532 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTP-YXXEFAPGLKPPLSSEAPSACLTP 708
P ++S+ FHTPT P T +S +P + + PLS +A S +P
Sbjct: 123 PPNSLSSQPKHQEFHLFHTPTIPRTTQLSSKTSSPIVIPDDNEQVASPLSKKAASLTSSP 182
Query: 709 L 711
L
Sbjct: 183 L 183
>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 28.3 bits (60), Expect = 1.2
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +3
Query: 273 TGTETKSNSVTV-QSLPNVS--SIIKGYRDAYLVNLEAVVFPSAPSLKVPVTVDLCWTTA 443
TG +T+ QSL N+S S I R N A FPS S +P VDL
Sbjct: 308 TGVSLSRPRLTLDQSLGNLSLGSGINQRRQVPRSNSYAGAFPSVVSASLPTKVDLN-HQM 366
Query: 444 DVTVEGVNVLATPSSS 491
DV+ E L+TP S
Sbjct: 367 DVSDEEQRFLSTPLGS 382
>SPBC1289.12 |usp109||U1 snRNP-associated protein
Usp109|Schizosaccharomyces pombe|chr 2|||Manual
Length = 352
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 526 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY 639
+PPS A+ + + P P P + + NP TP+
Sbjct: 245 RPPSMALLPSKQSTYWPALAAPVYPSMKDVPNNPFTPF 282
>SPAC17G6.02c |||RTA1-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 324
Score = 27.1 bits (57), Expect = 2.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 6 DLFMEEIVPLVVSAASAIPSLVDAFSSSKPPQTD 107
D+F + +P++ ++A IPSL A SK P T+
Sbjct: 241 DIF--DFIPMIFTSALLIPSLYPALERSKLPFTE 272
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 27.1 bits (57), Expect = 2.7
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 255 RLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD-AYLVN 368
R+Y L T ++S + PN S + +GY + A+L+N
Sbjct: 2840 RVYLPLVPTIQANSSADSSNPPNTSFLFRGYHETAWLIN 2878
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 27.1 bits (57), Expect = 2.7
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 616 SINPLTPYXXEFAPGLKPPLSSEAPSACLTPLVT-GH 723
S+NP TP +P + PP+S+ +P P+ + GH
Sbjct: 271 SLNPSTPSPFGGSPVMHPPVSNLSPRTPAVPMSSDGH 307
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 2.7
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 535 SPAISATSTRSSNPRFHTPTTPDLTSIS 618
S IS +ST N FH PT TS S
Sbjct: 801 SRTISTSSTNEYNTSFHAPTVSSTTSSS 828
>SPBC32C12.02 |ste11|aff1, stex|transcription factor
Ste11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 468
Score = 26.6 bits (56), Expect = 3.6
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Frame = +1
Query: 535 SPAISATSTRSS-NPRFHTPTTPDLTSISINPLTP-----YXXEFAPGLKPPLSSEAPSA 696
SP +SA S +P P+TP + SI+P TP Y + A L PLS + +A
Sbjct: 284 SPELSADKVLSHCSPIDARPSTPSCPNASISPKTPNTGDHYGFDGAEYLGTPLSVGSTTA 343
Query: 697 CL 702
L
Sbjct: 344 YL 345
>SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 357
Score = 26.2 bits (55), Expect = 4.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 96 GVWKKRKHRPRREWPKRQKRLKAQF 22
G WKK + + EW K ++ KA++
Sbjct: 119 GEWKKAREEDKAEWKKAREEDKAEW 143
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -1
Query: 117 QAGYQSEGVWKKRKHRPRREWPKRQKRLKAQF 22
+A + + WKK + + EW K ++ KA++
Sbjct: 123 KAREEDKAEWKKAREEDKAEWKKAREEDKAEW 154
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -1
Query: 117 QAGYQSEGVWKKRKHRPRREWPKRQKRLKAQF 22
+A + + WKK + + EW K ++ KA++
Sbjct: 134 KAREEDKAEWKKAREEDKAEWKKAREEDKAEW 165
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -1
Query: 117 QAGYQSEGVWKKRKHRPRREWPKRQKRLKAQF 22
+A + + WKK + + EW K ++ KA++
Sbjct: 145 KAREEDKAEWKKAREEDKAEWKKAREEDKAEW 176
>SPBC106.08c |mug2||DUF1773 family protein 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 296
Score = 26.2 bits (55), Expect = 4.7
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 48 ASAIPSLVDAFSSSKPPQTDTPPARSMD 131
A+ P++V F + PQ D PP R+++
Sbjct: 211 ATGYPAIVVPFLNGSLPQADLPPLRTIE 238
>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 4.7
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 336 IKGYRDAYLVNLEAVVFPSAPSLKVPVTVD 425
+K RD YL NLEA FPS+ +K+ +T+D
Sbjct: 378 LKTRRDQYLTNLEA--FPSSLFMKI-LTLD 404
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.2 bits (55), Expect = 4.7
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 553 TSTRSSNPRFHTPTTPDLTSISINPLTPYXXEFAPGLKPPLSSEAPSACLTPLVT 717
TST ++ +TP +S +N TP A PP++S TP+ +
Sbjct: 1616 TSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSPPITSSTVVNSSTPITS 1670
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 6.3
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 484 EGVASTLTPSTVTSAVVQQRSTVTGTLRLGAEGKTTASRLTRYAS 350
E +T+T +T +S + STV+ T + G ++AS + Y S
Sbjct: 568 EETTTTMTTTTCSSRPEETISTVSTTSTVSESGSSSASITSTYPS 612
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 25.8 bits (54), Expect = 6.3
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +1
Query: 526 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXXEFAPGLKPPLSS 681
+PPSP I R+S F +PT S+ + + G+ P SS
Sbjct: 494 RPPSPGIVTPPQRTSPSFFVSPTESTRQSLDSRRSFEHSTSSSSGISPSHSS 545
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 25.4 bits (53), Expect = 8.3
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 523 IKPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXXEFAPG--LKPPLSSEAPSA 696
I+ S + TS S++ ++ +TP+ S + LTP L+ PL +PSA
Sbjct: 294 IRSHSTNTTITSVDSASTALNSYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSA 353
>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 25.4 bits (53), Expect = 8.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 516 LMHQATLPCDLGYINPIIKSPIPYTNHP 599
+ HQA L C GY + + +P+ N P
Sbjct: 348 ICHQAILRCIYGYYHNLSLEELPFINVP 375
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,724,014
Number of Sequences: 5004
Number of extensions: 53470
Number of successful extensions: 420
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 416
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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