Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13p09
(723 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 32 0.40
04_03_0806 + 19857675-19859135 32 0.40
02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550 32 0.53
01_01_0448 - 3332238-3332330,3332414-3332481,3332570-3332618,333... 31 0.70
12_02_0985 + 25052753-25053691 30 1.6
02_01_0219 - 1437685-1437723,1437932-1438091,1438385-1438514,143... 30 2.1
01_05_0789 + 25231013-25231570,25231684-25231761,25232590-252326... 30 2.1
02_04_0452 + 23044190-23045227 29 2.8
01_01_0046 - 331758-332627 29 2.8
11_06_0610 - 25449085-25453284 29 3.7
04_04_1125 + 31085106-31085714 29 4.9
07_01_0321 - 2255342-2255604,2256506-2256779,2256886-2257068 28 6.5
04_01_0041 - 464695-464850,467485-469029 28 6.5
02_05_0788 + 31758119-31758384,31758482-31758634,31759385-317595... 28 6.5
01_06_0404 + 29098141-29098214,29098459-29098673,29099491-290995... 28 6.5
08_02_0875 + 22103903-22106293 28 8.6
06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-19... 28 8.6
03_06_0572 + 34812203-34812278,34812485-34813768,34813973-348140... 28 8.6
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +1
Query: 529 PPSPAISATS-TRSSNPRFHTPTTPDL--TSISINPLTPYXXEFAPGLKPPLSSEAPSA 696
P SP+ S TS + S ++PT+P TS + +P +P +PG P S +PS+
Sbjct: 1747 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSS 1805
>04_03_0806 + 19857675-19859135
Length = 486
Score = 32.3 bits (70), Expect = 0.40
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 558 NPIIKSPIPYTNHPRLNIHFHQSPDAVLXXIRAGVKASVVIRGSISVSHPPRH 716
NP + P PY + PRL +H H+ + A A+V G ++V PP H
Sbjct: 6 NPPLPLPPPYDSLPRLLLHHHRRLPRRRLVLAAHALAAVA--GHLTVPAPPHH 56
>02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550
Length = 204
Score = 31.9 bits (69), Expect = 0.53
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +1
Query: 523 IKPPSPAISATSTR-SSNPR--FHTPTTPDLTSISINPLTP 636
I PPSPA + S+R S +PR F TP T T+ S +P +P
Sbjct: 25 ITPPSPASTPRSSRPSESPRSGFSTPATAPRTAASPSPPSP 65
>01_01_0448 -
3332238-3332330,3332414-3332481,3332570-3332618,
3332716-3332798,3332900-3333023,3333389-3333486,
3333555-3333634,3333712-3333782,3333872-3333953,
3334158-3334237,3334365-3334416,3334843-3334958
Length = 331
Score = 31.5 bits (68), Expect = 0.70
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 541 AISATSTRSSNPRFHTPTTP 600
A S+T+TR S PR H PTTP
Sbjct: 2 AASSTATRLSPPRLHAPTTP 21
>12_02_0985 + 25052753-25053691
Length = 312
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = -3
Query: 520 IRARPPIVMREDEGVASTLTPSTVTSAVVQQRSTVTGTLRLGAEGKTTASRLTRYASR*P 341
+ +R + +R D S+ + +T S + S + T GAEG TTAS LT S P
Sbjct: 127 VSSRTGLFLRGDCHRNSSASNATNCSIPAETMSRMVPTASCGAEGNTTASALTCVTSTSP 186
>02_01_0219 -
1437685-1437723,1437932-1438091,1438385-1438514,
1438627-1438696,1439264-1439407,1439771-1439837,
1439970-1440019,1440386-1440559,1440881-1440934,
1441008-1441112
Length = 330
Score = 29.9 bits (64), Expect = 2.1
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +3
Query: 279 TETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSL--KVPVTVDLCWTTADVT 452
TE +N V V L SS GY D + ++ V + KV V +D TAD++
Sbjct: 167 TEAGANRVLVCDLH--SSQAMGYFDIPVDHVYGQVMNLIGDVRGKVAVMMDDMIDTADIS 224
Query: 453 VEGVNVLATPSSSRITIGGLALMHQ 527
+ +N+L P G L+HQ
Sbjct: 225 LPNINILMKPIKLGTIAKGAELLHQ 249
>01_05_0789 +
25231013-25231570,25231684-25231761,25232590-25232659,
25232743-25232812,25233262-25233469,25233546-25233716
Length = 384
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -2
Query: 557 DVAEIAGEGG-LMHKGETANSNARG*RGGQHIDSFNCDVSSSPTKVNG-DGYFEARGGRE 384
DV ++ GEG L++ G+TA ++R + + ++ ++ G D RGG E
Sbjct: 161 DVLDLVGEGARLLYVGKTAGYHSRTQEEIHELLLSFAEAGANVVRLKGGDPLVFGRGGEE 220
Query: 383 NDSLKINKIRVAV 345
D L+ IRV V
Sbjct: 221 MDFLQQQGIRVEV 233
>02_04_0452 + 23044190-23045227
Length = 345
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 476 HPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPP 598
H +L H+ +A SH SR H P + P S PP
Sbjct: 166 HGCLLLHHAGHGHGHAHSHSHSHSRAHNPSTRPPTSAPPPP 206
>01_01_0046 - 331758-332627
Length = 289
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/72 (31%), Positives = 30/72 (41%)
Frame = +2
Query: 500 YWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*RRTXXNSRRG*SLRCH 679
YW PY +S PP P PP + HP P+IP R +
Sbjct: 13 YWF--PYWTSPPPPPPPPPPPPSSSRYRPPSPPSSRHPHPTIPAARAAPPLG-----PTN 65
Query: 680 QRLHQRVSPPSS 715
+RLHQ+ PP+S
Sbjct: 66 RRLHQQPPPPAS 77
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 529 PPSPAISATSTRSSNPRFHTPTTPDLTSIS-INPLTPYXXEFAPGLKPPLSSE 684
PP+P A+S P HTP+ P+ T S +P TP +P PP + E
Sbjct: 618 PPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSP---PPPTPE 667
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 529 PPSPAISATSTRSSNPRFHTPTTPDLT-SISINPLTPYXXEFAPGLKPPLSSE 684
PP+P A+S P HTP+ P T +P TP +P PP + E
Sbjct: 651 PPTPESKASSPPPPTPEGHTPSPPKSTPPTEKSPPTPESESSSP---PPPAPE 700
>04_04_1125 + 31085106-31085714
Length = 202
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = +1
Query: 532 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXXEFAPG--LKPPLSSEAPS 693
P+PA T P TPT P T + P TP P PP + APS
Sbjct: 51 PTPATPTTPPTPWTPPPATPTPPTPTPWTPTPATPPPTPATPATPTTPPTPAPAPS 106
>07_01_0321 - 2255342-2255604,2256506-2256779,2256886-2257068
Length = 239
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +2
Query: 488 LSHYYWRSRPYASSHPPLRSRLHQPDHQIPDS--IHQPPQT*HPFPSIP*RRTXXNSRRG 661
++ ++ +R ASS + QP H +PDS IH PP P P+ P T N+ R
Sbjct: 1 MAAHHCSTRQVASSSSNPSNPRDQPTH-MPDSPQIHHPPPPPPPPPTDPAASTTPNAPRN 59
Query: 662 *SLRCHQRLHQRVSPPSSLG 721
+ ++ R+ LG
Sbjct: 60 SQVAAPVQVKPRMIIKGMLG 79
>04_01_0041 - 464695-464850,467485-469029
Length = 566
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 240 IIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPS-APSLKVPV 416
+I R + D++ T +SN + V +LP VSS + Y D ++ + P P ++ V
Sbjct: 40 LISVFRPFTDVSLTLCRSNYIGVTNLPIVSSECEAYYDDFVSGADFTARPQVVPPWRLAV 99
Query: 417 TVD 425
+D
Sbjct: 100 PLD 102
>02_05_0788 +
31758119-31758384,31758482-31758634,31759385-31759509,
31759650-31759678,31760943-31761008,31761059-31761125,
31761226-31761370,31761404-31761451,31762014-31762182,
31762645-31762779,31762858-31763064,31763608-31763735,
31763815-31763866,31764046-31764060,31764502-31764609
Length = 570
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +3
Query: 231 QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKV 410
Q I + ++ L N TV + N + GY+ +N+ + PSLK
Sbjct: 198 QVFCIVLEMFFYQLLQLLKVPNEKTVNVIENAIQTLPGYQPPKHINIGEYISSHVPSLK- 256
Query: 411 PVTVDLCWTTADVTVEGVNVLATPSS 488
D C T ++ +EG++ L S+
Sbjct: 257 ----DFCEPTVEM-LEGMSALKALST 277
>01_06_0404 +
29098141-29098214,29098459-29098673,29099491-29099596,
29099686-29100235,29100332-29100429,29100519-29100764,
29100867-29100981,29101092-29101305,29101402-29101991
Length = 735
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 532 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXXEFAP 657
P+P ++A S+R NP PD+T+ ++ + Y +P
Sbjct: 447 PAPVMAAFSSRGPNPITPQILKPDITAPGVSVIAAYSEAVSP 488
>08_02_0875 + 22103903-22106293
Length = 796
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 532 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXXEFAP 657
P+P ++A S R NP+ PDL + +N L + P
Sbjct: 506 PAPVVAAFSARGPNPQSPEILKPDLIAPGLNILAAWPSGVGP 547
>06_01_0018 +
194295-194640,194679-194917,195737-195885,196248-196342,
196685-196780,197248-197399,198683-198823,199068-199319,
199463-199603,199686-200003,200146-200232,201025-202006,
202091-202179,202968-203072,203155-204306,204844-205359,
205455-205650,206299-207182
Length = 1979
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 532 PSPAISATSTRSSNPRFHTPTTPDLT 609
PSP +A TRSS+ R H TP T
Sbjct: 9 PSPTSTARETRSSSARGHASPTPTPT 34
>03_06_0572 +
34812203-34812278,34812485-34813768,34813973-34814049,
34814299-34814646
Length = 594
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +1
Query: 535 SPAISATSTRSSNPRFHTPTTPDLTSI-SINPLTPYXXEFAPGLKPPLSSEAPSACLTPL 711
+PA + + ++NP + P TP + ++ S NP T Y P L P P P
Sbjct: 253 TPATNPVTVPATNPAMN-PVTPGIVTVPSTNPATGYSNN--PNLPPLYPEPTPVTMPDPT 309
Query: 712 VT 717
T
Sbjct: 310 TT 311
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,774,019
Number of Sequences: 37544
Number of extensions: 432084
Number of successful extensions: 1537
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1533
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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