Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13p04
         (697 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006708-23|AAF60414.1|  975|Caenorhabditis elegans Paz/piwi dom...    29   2.4  
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p...    28   7.3  

>AC006708-23|AAF60414.1|  975|Caenorhabditis elegans Paz/piwi
           domain-containing protein2 protein.
          Length = 975

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 601 TLPVTSNRNTLSHSCTERHVQLFLPP 678
           TLPVTS   T   +C +R  QL +PP
Sbjct: 41  TLPVTSEHKTAHDACIKRLEQLEIPP 66


>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
           protein Y41E3.9 protein.
          Length = 1440

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 11/48 (22%), Positives = 28/48 (58%)
 Frame = +3

Query: 279 YCAILKHCSKTKSKCQSQVQVEVKIIKPRAFEILRDVDVENTGAIILI 422
           +  ++KH S+++++C++ + V  K+IK     ++++   +    I LI
Sbjct: 527 FTELMKHFSQSETECEAVLDVFFKVIKSTNSSVIQEFSTQIQKCIELI 574


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,208,977
Number of Sequences: 27780
Number of extensions: 229511
Number of successful extensions: 530
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 530
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)