Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13m11
(134 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061488-1|AAL29036.1| 244|Drosophila melanogaster LD45195p pro... 27 2.7
AF242296-1|AAF59842.1| 1619|Drosophila melanogaster mechanosenso... 27 2.7
AE014296-508|AAF47684.1| 244|Drosophila melanogaster CG1240-PA ... 27 2.7
AE014134-916|AAF52248.3| 1619|Drosophila melanogaster CG11020-PA... 27 2.7
AE014134-915|AAS64642.1| 1712|Drosophila melanogaster CG11020-PB... 27 2.7
BT021212-1|AAX33360.1| 758|Drosophila melanogaster SD03462p pro... 27 3.6
AJ289232-1|CAC81969.1| 758|Drosophila melanogaster matrix metal... 27 3.6
AE013599-907|AAF58911.5| 1136|Drosophila melanogaster CG1794-PA,... 27 3.6
AE013599-906|AAS64885.1| 758|Drosophila melanogaster CG1794-PB,... 27 3.6
AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p pro... 26 6.3
BT025075-1|ABE73246.1| 676|Drosophila melanogaster IP15253p pro... 26 8.3
AY044243-1|AAK85150.1| 664|Drosophila melanogaster forkhead pro... 26 8.3
AF292388-1|AAK97051.1| 676|Drosophila melanogaster biniou protein. 26 8.3
AE014296-1175|AAF50625.2| 676|Drosophila melanogaster CG18647-P... 26 8.3
>AY061488-1|AAL29036.1| 244|Drosophila melanogaster LD45195p
protein.
Length = 244
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 14 SRRVQTSPEEEESANRTRKDSLLRPAPVKPRGPCERHK 127
S S EEE+A + ++ RP P K + P ++ K
Sbjct: 85 SEEEDPSSSEEEAAKKKKQSPKKRPQPTKHKAPKKKRK 122
>AF242296-1|AAF59842.1| 1619|Drosophila melanogaster mechanosensory
transduction channelNOMPC protein.
Length = 1619
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 8 TASRRVQTSPEEEESANRTRKDSLLRPAPVKP 103
T + + + P+++ S+N +KD L PAP P
Sbjct: 39 TPASKADSDPKDDSSSNGDKKDMDLFPAPKPP 70
>AE014296-508|AAF47684.1| 244|Drosophila melanogaster CG1240-PA
protein.
Length = 244
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 14 SRRVQTSPEEEESANRTRKDSLLRPAPVKPRGPCERHK 127
S S EEE+A + ++ RP P K + P ++ K
Sbjct: 85 SEEEDPSSSEEEAAKKKKQSPKKRPQPTKHKAPKKKRK 122
>AE014134-916|AAF52248.3| 1619|Drosophila melanogaster CG11020-PA,
isoform A protein.
Length = 1619
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 8 TASRRVQTSPEEEESANRTRKDSLLRPAPVKP 103
T + + + P+++ S+N +KD L PAP P
Sbjct: 39 TPASKADSDPKDDSSSNGDKKDMDLFPAPKPP 70
>AE014134-915|AAS64642.1| 1712|Drosophila melanogaster CG11020-PB,
isoform B protein.
Length = 1712
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 8 TASRRVQTSPEEEESANRTRKDSLLRPAPVKP 103
T + + + P+++ S+N +KD L PAP P
Sbjct: 39 TPASKADSDPKDDSSSNGDKKDMDLFPAPKPP 70
>BT021212-1|AAX33360.1| 758|Drosophila melanogaster SD03462p
protein.
Length = 758
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 3 SRQRADESRPLQKKRRAPTEQEKTRSYALRRSSHEDR 113
+R+R +E R Q+K R E+E+ RR E+R
Sbjct: 353 ARERQEEERRRQEKERRRQEEERRHQEEERRRQVEER 389
>AJ289232-1|CAC81969.1| 758|Drosophila melanogaster matrix
metalloproteinase 2-MMP protein.
Length = 758
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 3 SRQRADESRPLQKKRRAPTEQEKTRSYALRRSSHEDR 113
+R+R +E R Q+K R E+E+ RR E+R
Sbjct: 353 ARERQEEERRRQEKERRRQEEERRHQEEERRRQVEER 389
>AE013599-907|AAF58911.5| 1136|Drosophila melanogaster CG1794-PA,
isoform A protein.
Length = 1136
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 3 SRQRADESRPLQKKRRAPTEQEKTRSYALRRSSHEDR 113
+R+R +E R Q+K R E+E+ RR E+R
Sbjct: 731 ARERQEEERRRQEKERRRQEEERRHQEEERRRQVEER 767
>AE013599-906|AAS64885.1| 758|Drosophila melanogaster CG1794-PB,
isoform B protein.
Length = 758
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 3 SRQRADESRPLQKKRRAPTEQEKTRSYALRRSSHEDR 113
+R+R +E R Q+K R E+E+ RR E+R
Sbjct: 353 ARERQEEERRRQEKERRRQEEERRHQEEERRRQVEER 389
>AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p
protein.
Length = 1062
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 6 RQRADESRPLQKKRRAPTEQEKTRSYALRRSSHEDRVNAIKK 131
RQR+ L+ K + P EK RS RRS +DR + +K
Sbjct: 468 RQRSRSKDALRCKEK-PQSNEKERSRERRRSKSKDRQRSKEK 508
>BT025075-1|ABE73246.1| 676|Drosophila melanogaster IP15253p
protein.
Length = 676
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 16 PTSPDLSRRRGERQPNKKRLAPTPCAGQATR 108
P++PD +++ G R+P K L+ G A +
Sbjct: 295 PSTPDTTKKSGTRRPEKPALSYINMIGHAIK 325
>AY044243-1|AAK85150.1| 664|Drosophila melanogaster forkhead
protein FoxF protein.
Length = 664
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 16 PTSPDLSRRRGERQPNKKRLAPTPCAGQATR 108
P++PD +++ G R+P K L+ G A +
Sbjct: 283 PSTPDTTKKSGTRRPEKPALSYINMIGHAIK 313
>AF292388-1|AAK97051.1| 676|Drosophila melanogaster biniou protein.
Length = 676
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 16 PTSPDLSRRRGERQPNKKRLAPTPCAGQATR 108
P++PD +++ G R+P K L+ G A +
Sbjct: 295 PSTPDTTKKSGTRRPEKPALSYINMIGHAIK 325
>AE014296-1175|AAF50625.2| 676|Drosophila melanogaster CG18647-PA
protein.
Length = 676
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 16 PTSPDLSRRRGERQPNKKRLAPTPCAGQATR 108
P++PD +++ G R+P K L+ G A +
Sbjct: 295 PSTPDTTKKSGTRRPEKPALSYINMIGHAIK 325
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,684,151
Number of Sequences: 53049
Number of extensions: 95329
Number of successful extensions: 831
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 24,988,368
effective HSP length: 25
effective length of database: 23,662,143
effective search space used: 449580717
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -